Xiphophorus couchianus (Monterrey platyfish): 114145343
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Entry
114145343 CDS
T05908
Symbol
cacna1a
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114145343 (cacna1a)
04020 Calcium signaling pathway
114145343 (cacna1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114145343 (cacna1a)
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114145343 (cacna1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
114145343
NCBI-ProteinID:
XP_027874650
LinkDB
All DBs
Position
5:33962467..34098093
Genome browser
AA seq
2446 aa
AA seq
DB search
MARFGDELPNRYGGGGGGGGGGGGGAGGQGGPGRGGSRQGGPPGAQRMYKQSMAQRARTM
ALYNPIPVRQSCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEWMILTTIIANCIVLALEQ
HLPDGDKTPLSERLEETEPYFIAIFCFESGIKILALGFALHKGSYLRNGWNVMDFVVVLT
GILSSVGSQLDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAILM
FAIIGLEFYMGKFHTTCADPVTKEKVEDRPCGPKLPSRLCPNDSSCESGWIGPNYGITQF
DNILFAILTVFQCITMEGWTDMLYYSNDVEGSMWNWMYYIPLIIIGSFFMLNLVLGVLSG
EFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEEDGTGNFDGSRRRPT
IKTRNNKTELLNQEEGEDNIGDAVGFARSSIKSGKDGANYSTKERRMRFFIRKMVKTQAF
YWTVLCLVGLNTICVAVVHYNQPELLSDFLFYAEFIFLGLFMSEMLIKMYGLGIQPYFHS
SFNCFDCVVIVGSIFEVVWATIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLN
SMKSIVSLLFLLFLFIVVFALLGMQLFGGLFNFEEGTPPTNFDTFAAAIMTVFQILTGED
WNMVMYDGIESQGGVKDKGMVFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEE
EQEEAANQKTALQKAKEVAEVSPLSAANLSIAAKEQQKNHTKPNKSVWEQRTSEIRRQNL
MTSREALYNELEQDDWKVGEEGEEVSFPRKARGDVKTHLDRPLVVNPQDNCNNNTNKTPP
GELPLDQQYRRQDVDHCRRAAHHCHYHRHHHQKSTNPDGVDATQLMETNMGHGFSCTSLG
NVEGNVERHGDEEKHSHQSHRGHRHRNRECREARSVSPHHGIGADGNGEARRCRQHRRAA
READEGRRHQCRATEGDGEKSEEEGGQKARRHRHCNQERCRGHRVRNAYSFAHVREHHST
CPSLSTTRPIQQYNEDLDNFRNNSKLASAQEHPYDLPPDHPDHPDHLNNLLNCQDADTHT
LLHSMDSLILTSMAKPDYTSIDMPPVYPYPSTNAILQVNKNANTDQKKSEEKKKEEDEGE
DEDNAKRMPPYSSCFIMSTTNPFRKCCHYILTLKYFEFSILSVIAMSSIALAAEDPVKPD
SPRNNVLRYFDYVFTGVFTFEMLIKMVVLGLFLHQGSYFRDLWNILDFIVVSGALVAFAF
TPSSTRGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYM
LFMFIFAVVAVQLFKGRFFYCTDESKEFARDCRGEYLVYEKDEVKAEKREWKKYDFHYDN
VAWALLTLFTVSTGEGWPQVLKHSVDSTYEDQGPSPGYRMEMSIFYVVYFVVFPFFFVNI
FVALIIITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPKNKLSFQYRMWHFVVS
PPFEYSIMALIALNTIVLMMKHYEADVAYDNVLKYLNIVFTAFFFMESILKIIAFGPLNY
FRDAWNVFDFVSVIGSITDILVTEFWDNFINLSFLRLFRAARLIKLLRQGETIRILLWTF
VQSFKALPYVCLLIAMLFFIYAIIGMQLFGNIALDEEEETAINEHNNFRTFIMALMLLFR
SATGEAWHDIMLACLGEKKCDPESGSTGKECGSTFAYTYFVSFIFLCSFLMLNLFVAVIM
DNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPH
RVACKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIW
PNLSQKTLDLLVTPHKAATDLTVGKIYAAMMIMEYYRQSKTKKLQALREEQCSSLPNRTP
LMFQRMEPPSEGGGTEGQAGPGQNGLPGVQPDNINSIPPEGGLTESQSWMTAKAQEMFQK
TGNWSPDRPYPDDVHENRHNPQTVEMREMGRDGYSDTEPCHPVDGHGRTLSMPRLSADNQ
RRRHRPRGNNLSTITDNSPMRRSTSSLVHGRSGRGVRLDDYSLERVVSEEGRHGSGRRHR
DRSHRTSQRSLTRYTDADTGILSISCLGLGTDLSTTTQSGDLPPKERERDRGRTKDRRHH
HHHHRHHSSMDKERYDHHDYPHRQPQDRHWSRSPSEGPDGRGHRQGSSSVSGSPVPSTSG
TSTPRRGRRQLPQTPAVPRPHVTYSPAVRKPLYGPPGPGRLRSPSPRHFSPPDHDRGYHH
RPPSRHASPHHGGSSSRHGSPRSPRHQSPHSPLHGSPRSPHRNRWSGPPPGDSLEGDGPF
YERDYEYERHHEPPAYEQSLSHGNPHPHGGNPHPHPRSPRTARHGPPPPPHPHPRRVPNG
YRSSSPSPHRRGPPGAPHPHHRPPHARGPRKDLHEPYSETDEDDWC
NT seq
7341 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctttggagacgagctacccaacaggtacggaggaggaggaggtggtggtggc
ggtggtggcgggggtgccggcggacaaggggggcccggccgcggcggcagcaggcaaggt
gggccccccggagcgcagcggatgtacaagcagtcgatggcccagagagcccggaccatg
gccctgtacaaccccatacccgtccggcagagctgcctaacggtcaaccgctccctcttc
ctcttcagcgaagacaacgtggtgaggaagtacgccaaaaaaatcaccgaatggcctccg
tttgaatggatgatcctcaccaccatcatagcaaactgcattgtcctagctctggaacag
caccttcctgacggagacaagacgcctttgtccgaaagactggaagagacggagccctac
ttcatagccatcttctgtttcgagtctggaatcaagatcctggctttgggatttgcttta
cataagggctcctatctgaggaacggctggaacgtcatggacttcgtggtcgtcctcact
ggaattctgtcgtctgtggggtctcagcttgacctgaggacgctccgagctgtcagagtg
ctgcggcccctaaaactggtgtctggaattcccagcctgcaggtggtgctcaagtccata
atgaaggccatgatccccctgcttcagatcggcctgctgctgttcgtggctatccttatg
ttcgccatcatcggcttggagttctacatgggaaagttccatacaacctgcgctgacccc
gtcacaaaggagaaagtggaagatcgcccatgtggtcccaaactaccctccagattgtgc
cccaatgactcatcgtgtgaaagtggctggattggaccaaactacggcatcactcagttt
gacaacatcctgttcgctattctgacagtcttccagtgcatcactatggaaggatggaca
gacatgctctactatagcaacgacgtggagggcagcatgtggaactggatgtactacatc
cccctcatcatcatcggctccttcttcatgctcaacctggtgctgggcgtgctttcaggc
gaatttgccaaagagagggaacgggtggagaacaggagcgagttcctgaagctgaggcgg
cagcagcagatcgagcgagagctcaacggatacctggagtggatctgcaaagcggaggag
gtgattctggctgaggaagacggcacggggaactttgatggttcgagacgaaggccaacc
atcaaaaccagaaataacaaaacagagctgttgaatcaagaggaaggagaggacaacata
ggagatgcagtaggatttgctcgctccagcataaagagcggtaaggacggggcgaattac
agtacaaaagagcgacggatgcgattcttcatccggaagatggtgaagacacaggccttc
tactggacagtgctctgcctggtgggcctcaacaccatctgtgtggccgtggtgcattac
aaccagccagagcttctttccgactttctcttctatgcagagttcatcttcctcggtttg
ttcatgtctgaaatgctgatcaaaatgtacggtctgggcatccagccctacttccactcc
tcatttaactgcttcgactgtgtggttattgttggtagcatctttgaggttgtgtgggcc
accataaaaccaggcacatcatttggaatcagtgtgttgcgagctctcaggctgttgcgt
atcttcaaagtaaccaagtactgggcgccactgaggaacctggtggtttcgctgttgaac
tccatgaagtccattgtcagcttgctcttcctcctcttcctcttcatcgtggtttttgct
ttgttggggatgcagctcttcggaggactattcaactttgaagaaggaactccgcctacc
aattttgatacatttgcagcagcaatcatgacggtgtttcagatcctgacaggagaggac
tggaacatggtgatgtacgacggcattgagtcgcagggaggagtaaaggacaaaggaatg
gtcttctccatcttcttcatcgtcctcacactctttggcaactacacgctgctgaacgtg
ttcttggctatcgctgttgacaatctggccaatgcccaggaactgactaaggacgaagaa
gagcaggaggaggcagccaatcaaaagacggcactgcagaaggctaaggaggtggcagag
gtcagcccgctgtctgctgccaacctgtcgattgctgcgaaggagcagcagaagaaccac
accaagcccaataagtctgtgtgggaacagagaaccagcgagattcggcggcagaacttg
atgacgagtcgtgaggctctctacaatgaactggaacaggatgactggaaggtgggagaa
gaaggagaggaggtgtcattcccacggaaagcacgtggcgatgtgaaaacgcacctggac
agaccattggtggtaaacccgcaggacaattgcaacaacaacaccaacaagaccccaccc
ggcgagctgccgctagatcagcagtatcgtcggcaggatgttgaccactgccgccgcgct
gctcaccactgccactaccaccgccatcaccaccagaaatccaccaacccagacggcgtg
gatgcaacccaactgatggaaaccaacatggggcacggtttcagctgcacgtctctgggt
aacgtcgaaggaaacgtggagcgccacggggatgaagagaagcacagccaccagagtcat
cggggccatcggcacaggaacagagagtgcagggaggctcgtagcgtttctccccatcac
ggcataggtgcagacggcaacggtgaggcgaggaggtgcaggcagcaccgcagggcagcc
agggaggcggatgagggcagaagacatcaatgcagggcaacagagggagacggagagaaa
agcgaggaagagggtggacagaaggcaagacgacatcggcactgcaaccaggaacgatgc
agaggacatcgtgtcagaaatgcctattcctttgcccatgtcagggagcatcacagcacc
tgccccagcctctcaactacacggcccatacagcagtacaacgaggacctcgacaacttc
cgcaacaacagcaagctggccagtgcccaagagcacccttatgatctcccacctgatcac
ccagaccatccggaccatctcaacaacctgctgaactgccaggacgccgacacccacacc
ctgcttcacagcatggacagcctgatcttgaccagcatggcaaaacccgactacacatcg
atagacatgccccctgtctacccgtacccctcgaccaacgcaatcttgcaagtgaacaag
aacgccaacactgaccagaagaagagcgaggagaagaagaaggaggaggacgagggtgaa
gacgaagacaacgctaagcgcatgcctccctatagttcctgcttcataatgtctaccacc
aatccgtttcgaaagtgctgtcactacatcctgactctgaagtattttgagttcagcatc
ctgtccgtcattgctatgagcagcatcgccctggcagcagaggaccccgtcaagcccgac
tcgccacgaaacaacgtgctgcgttattttgactacgttttcacaggagtcttcacattt
gaaatgttgatcaagatggtcgttctcggcttgtttctccaccaagggtcttactttcgt
gacttgtggaacatactggactttatagtggttagtggtgctctggtggcctttgccttc
acgccgagcagcacccgggggagcagcaaaggcaaagacatcagtacaatcaaatctctg
cgtgtgctgagggtgctgcgtccccttaagaccatcaagcgtctccccaagttaaaggca
gtgtttgactgcgtggtgaactccctgaagaatgtgttgaacattttgatcgtctacatg
ctcttcatgttcatcttcgccgttgtggctgtgcagctgttcaagggtcgcttcttctac
tgcacagacgaatccaaagagtttgcacgggactgcaggggcgaatatttagtctatgaa
aaagacgaggtaaaagccgagaagcgggaatggaagaagtacgattttcactacgacaac
gtggcttgggccttgctcaccctcttcaccgtctccaccggagaggggtggccacaagtg
ttaaagcactcagtggactctacttatgaggatcagggcccaagcccgggatacaggatg
gaaatgtccatcttttacgtggtgtacttcgttgtcttccctttcttctttgtcaacatc
ttcgtggctctcattatcatcaccttccaggagcaaggggataagatgatggaagactac
agcttagaaaagaacgagagagcctgtatagatttcgccattaacgccaaacctctgact
cgccacatgccaaagaacaaactgagcttccagtatcggatgtggcatttcgtagtgtcc
cctcccttcgagtacagcatcatggctctgattgcactcaacacgatcgtcctcatgatg
aagcattacgaagcagatgtagcttacgataatgtactgaagtacctgaacattgtgttc
accgccttcttctttatggaatctatcctgaaaatcattgcttttggtcccttgaactac
ttcagagacgcctggaacgtttttgattttgtctcagtcattgggagcattactgacata
ttggtaacagagttttgggacaatttcatcaacttgagctttctgaggcttttcagggcg
gctcgcctcattaagctcctgagacagggagaaacgatccggatcttactgtggacgttt
gtccagtccttcaaggctctgccgtatgtgtgtctgctcatagccatgctcttcttcatc
tatgccatcattggcatgcagttgtttggaaacatagctcttgacgaggaggaagaaact
gctatcaacgagcataacaacttcagaacattcattatggccctaatgctgctgttcaga
agtgctacaggtgaggcgtggcatgatatcatgctggcatgcctgggagagaagaaatgc
gacccagagtcaggaagtaccgggaaggagtgtggcagcaccttcgcctacacctacttt
gtctcctttattttcctctgctccttcctgatgctgaatctctttgtggccgtcatcatg
gacaactttgagtacctcactagagactcgtccatcctggggccgcaccacttggacgaa
tacgtaaggatatgggccgagtacgacccagccgcctgcgggcgcatacattataaggat
atgtacagtttattgcgagttatctcccctcctctgggccttggcaagaaatgcccacat
agggtggcctgcaagaggctcctgcgcatggatctgcctgttgccgacgacaacacagtg
cattttaactccaccctcatggctctgatcaggacagcactggatataaagattgccaag
ggcggtgcagataagcaccagatggacgcggagctgaggaaggagatgatggctatctgg
ccaaatttatcacagaagactctggacctgctggttactccgcacaaggcagccacagac
ttgacggtgggcaaaatctacgctgccatgatgatcatggaatactacagacagagcaag
accaaaaagctgcaagccctgcgagaggaacagtgctcctcccttcctaaccgaacgcca
ttaatgtttcagcgcatggagccaccctctgagggagggggcacggagggccaggcgggg
ccaggccagaacggtctgcccggcgttcagccggacaacatcaacagcatacctcctgaa
ggtggcttgactgaaagccaatcatggatgacggctaaagcacaggaaatgttccaaaag
accgggaactggagcccggaccggccctaccccgacgacgtccatgagaaccgccacaat
ccccagactgtagagatgagggagatggggcgggacgggtactccgacactgagccctgt
cacccagtggacgggcatgggcggacgctctccatgccccgcctctcggcagacaaccaa
cggaggagacacaggccccgtggaaataacctcagtaccatcaccgacaacagcccgatg
cgtcgctccacctccagtctggtccacgggcgctcaggtcgcggcgtgaggctggacgac
tactctctggagagggtggtgtccgaggaggggagacacggcagcgggcgcaggcacagg
gaccgaagtcatcgcacttcgcagcgatcgctgaccagatacacagacgccgacacaggt
atcctatctatttcatgtctaggtctgggtacagacctcagcaccaccacacagtcaggt
gacctgcctcccaaggagcgtgagcgggaccgtgggcgcaccaaggaccggcgtcatcac
caccaccatcaccgccatcacagctcaatggacaaggagcgctatgatcaccatgactac
cctcatagacaaccccaggaccgccactggtcccggtcccccagcgaagggccagacggg
agaggtcaccgacaggggagtagttcggtaagtggcagcccggtcccctccacctcgggg
accagcactccacggagaggccgccgccagctgccacagactcctgccgtcccacgcccg
cacgtcacctactcccccgccgtccgaaagcccctctacggccctccgggcccgggtcga
ttgcgctccccatcccctcgacacttctctccgccggaccacgaccggggttaccaccac
cggcccccgtcacgtcacgcctcccctcaccacggcggctcctcgtccaggcacggctcg
ccgcgctcgcctcggcaccagtcgccgcactcgccgctccacgggtcacctcggtctccg
caccggaatcgctggagcggccccccgccgggggacagcctggagggtgacgggcccttc
tacgagagggattacgaatatgagcggcatcatgagcctcccgcctacgagcagagcctc
tcccatggcaaccctcatccgcatggtggaaaccctcacccacacccacgctcaccaagg
actgctcgtcacgggcccccgccaccccctcacccgcatccacgtagggttcctaatggc
taccgttcatcctcaccttccccgcataggaggggaccgccaggggcaccgcaccctcac
cacaggcctccccatgccagagggccccgcaaggacctgcatgaaccttacagtgagacg
gacgaggatgactggtgctag
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integrated database retrieval system
