Xiphophorus couchianus (Monterrey platyfish): 114145353
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Entry
114145353 CDS
T05908
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04260
Cardiac muscle contraction
xco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114145353
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
114145353
04261 Adrenergic signaling in cardiomyocytes
114145353
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114145353
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114145353
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
dCache_1
VWA
VWA_3
VWA_2
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
114145353
NCBI-ProteinID:
XP_027874680
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Position
1:16975561..17106764
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AA seq
1086 aa
AA seq
DB search
MQVGRCCVASSVWFMWLVLLFSTQNIGATGVGGTHQSIPPSVVKLWASAFGGEMKSISAK
YSGSQLLQKKYKEFERAVRVEEIDGLRLVKRLAKNMEEMFHKKAQAMKRLVEAAEEAHLQ
HEENPDLQYEYFNAVLINEDVELGGKFVLQPNDHFNNRSVNLSLSVVQVPTNMYNKDSAI
VNGVYWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWKPDDHGVIAFDCRNRK
WYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNEELHYVE
PCLNGTLVQADVTNKDHFREHLDKLFAQGIGMLDIALTEAFNLLSDFNKTGRGSECSQAI
MLVTDGAVDTYDAIFEKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGYFTQISTLA
DVQENVMEYLHVLSRPKVIDREHDTVWTEAYIDSTLPQAQKSDDGQGPVLMTTVAMPVFS
TKNETRNRGILLGVVGTDVPVSELLKTIPKYKLGIHGYAFAITNNGYILTHPDLRPLYGD
GKKRRKPNYSSVDLSEVEWEDKDDTLRNAMVNRKTGTFSMEVTKSVDKGKRVLVLHNDYY
YTDIKGTPFSLGVALSRGHGKYFYRGNVTVEEGLHDLEHPDVALADEWTYCNTDEHPKHR
YLSQIDAIKMYLSGQEPRLHCDKELIQEVLFDAVVTAPLEAYWTSLVLNKSENSDKGVEI
AYLGTRTGLSRINLFVVPDELTNLDFLTAEDKEGVFNADHFPLWYKRAAEQVPGTFIYSL
PFNSGSENRSVVLASTAIQLLDERKSPIAAAVGIQMKLEFFQRKFWTASRQCAALDGKCS
ISCDDEHINCYLIDNNGFILVAEDYTLTGNFFGEAEGAVMNKLLQMGSFKRVTLYDYQAL
CWVHSESSDSGHTLLDPYFAFFAAVKWILTELVIFLVEFNLYSWWNSDLTAKAQRVDPHM
QVPCDTEYPAFVSERTIKENMGNIDCNGCIKSFVIQQIPSSNLFMVVVDNKCDCSQFGPI
TMDPFEIMYNESLKCERLKMQKDRRRPDTCHPFHPEENSMECGGAGSLTTSLSATLLLAL
MALLLR
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgggtcggtgctgtgtggcttccagcgtttggtttatgtggctggtcttactt
ttctcaactcaaaacatcggggcaactggagttggaggcacccaccaaagcatccccccg
tccgtggtgaagctctgggcctctgcatttggaggggagatgaagtccatctctgcaaag
tactctggctcccagcttctgcaaaagaaatacaaggagtttgagcgggcggtgagggtg
gaggagattgatgggctacgactggtgaagaggctggctaagaacatggaagagatgttt
cacaagaaagcccaggctatgaagcgattggtggaggcagcagaggaagcccatctacag
catgaagagaatccagacctgcagtatgaatacttcaatgctgtgctgatcaatgaggat
gtagagctgggaggaaagtttgtcctgcagcccaacgatcattttaacaaccgatcagtc
aacctcagcctcagtgtggtacaggtgccaaccaatatgtacaataaagattctgcaatt
gtcaatggtgtgtactggtcggaggccctgaacaaggtgtttgtggataactttgagagg
gatccctcgcttatatggcaatactttggcagtgctaagggcttttttagacaatatcct
ggaatcaaatggaagccagatgaccatggagttatagcttttgactgtcgtaatcgaaag
tggtacatccaggcagccacctctccaaaggatgtcgtgatcttggtggatgtcagcggc
agcatgaaaggcctgagacttaccattgccaggcagacggtttcctccattctagacact
cttggagatgatgacttttttaatatcattgcttacaatgaggaactgcattatgtggag
ccatgtctgaacggaactctggttcaagctgatgtcaccaacaaagatcatttccgggag
caccttgataagctgtttgctcaaggcattggtatgttggacatagctctgacggaggcg
ttcaatcttctcagtgattttaataagactggaaggggcagtgagtgtagccaggccatt
atgctggtgacagatggagcagtcgatacatacgatgccatctttgagaagtataactgg
ccagagaggaaggttcgaatattcccctacctgattggtcgggagtcagcctttgcagat
aatttaaaatggatggcgtgtgctaacaaaggctacttcactcaaatttctacgctggcc
gatgttcaagagaatgtgatggagtatctccatgtgctgagtcgtcccaaagttattgac
cgggagcatgacacagtgtggactgaggcatacatcgacagcactctcccccaagcacaa
aagtcggatgatggtcaaggtccagtcctgatgacaacagtagcaatgccagtgttcagt
accaagaatgagactagaaacagaggaatcctgcttggggtggttgggacagatgtgcca
gtttctgagctgctcaaaaccattcccaaatataagctgggtattcacggctatgccttt
gcaatcaccaacaatggctacatcctcactcacccagatctacggccactttatggtgat
ggcaaaaagcgaaggaagccgaactacagcagtgtggatctgtctgaagtggaatgggag
gataaggatgacacgttgagaaatgccatggtcaacaggaagacggggaccttctccatg
gaggtgacgaagagtgtggacaaagggaaacgtgtactggttttacacaatgattactac
tacacagatattaaaggcactcctttcagtctaggagttgctctttctagagggcatggg
aaatatttctacagaggcaatgtcaccgtggaagaaggacttcatgacttggagcatcct
gatgttgcactggctgacgaatggacatactgcaacacagacgagcaccccaagcatcgc
tacttgtctcaaatagatgcaataaaaatgtatctcagtgggcaggaacctcgcttgcat
tgtgacaaggaacttatccaggaagttctctttgatgccgttgtgaccgctccacttgaa
gcctactggaccagtcttgtgctcaataagtcagaaaactcagacaaaggtgtggagatt
gcctatcttggcacaaggacagggctgtccagaattaatctatttgtggtgcctgacgaa
ctcacaaacctagacttcctgacagctgaagacaaagagggagtgtttaatgctgatcac
tttcctctatggtacaagagagcagcagaacaagttcctggcacctttatttattctctg
cctttcaactcaggttcagaaaacaggagtgttgtattggccagtactgccattcagctt
ctggatgagaggaaatcccccatagctgctgctgttggcatccagatgaagttggagttt
ttccagagaaaattttggacagccagcagacagtgtgcagcattagatgggaaatgctcc
ataagctgtgatgatgagcatattaactgctacctcattgacaacaatggcttcattctt
gtagcagaagactatacactgactggaaatttttttggtgaagcagaaggagctgtaatg
aataagttgctgcagatgggctcttttaaacgtgtcacactgtatgactaccaggctctt
tgttgggtccattcagaaagtagtgacagtgggcacacactcctggatccttacttcgct
ttctttgcagctgtaaagtggatcctgactgagcttgtcattttcctggttgaattcaac
ttatacagttggtggaactctgatctcacagccaaagctcaaagggtagatccgcatatg
caggtgccatgtgacacagagtaccctgccttcgtctcagaaagaacaatcaaggagaac
atgggcaacatcgactgcaatggctgcatcaagtcatttgtgattcagcagatccccagc
agtaacctttttatggttgtggtggacaacaagtgtgactgcagccagtttggacccatc
accatggacccctttgaaattatgtataacgaatcgctcaagtgtgagagactgaagatg
caaaaagacaggaggcgtccggatacctgtcacccttttcatccagaggagaattcaatg
gagtgtggaggagctggcagtctcaccacatcgcttagtgccacgctgcttttagccctc
atggcattgctccttaggtga
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