Xiphophorus couchianus (Monterrey platyfish): 114145370
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Entry
114145370 CDS
T05908
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04020
Calcium signaling pathway
xco04148
Efferocytosis
xco04218
Cellular senescence
xco04310
Wnt signaling pathway
xco04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114145370 (nfatc1)
04310 Wnt signaling pathway
114145370 (nfatc1)
04020 Calcium signaling pathway
114145370 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114145370 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
114145370 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
114145370 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114145370 (nfatc1)
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
114145370 (nfatc1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
114145370
NCBI-ProteinID:
XP_027874693
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Position
5:complement(26177117..26249197)
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AA seq
944 aa
AA seq
DB search
MQDTSSLSVKAKFNFGAAAAAAAAAAGQERGLQRLKSTAAADMKSAEEDAYNYTPNVSLP
IGMSNPCLSTQYHTLQSSPVIPVSSCHQTGYSVQNDNHAASSYYLPQALRPNGAPALESP
RIEITAYSQYPEDEVEASGREDHIIKRGVNSIVTLTLPNVDGYRDPSCLSPASSISSRSC
NSEASSYESGFYNYDNSPQNSPWQSPSVSPRGSSSLLSCPHAIGPAASPHHSPSNSPQIG
AMAEEGWPAQPRGSRPNSPSCSGVGGGNSGGIGKRKYSFSGSSYQQTSCSPNQSPTPSSH
GSPRVSVTDENWLTNTNQYTNLAIVAAINALTTDGMADMGEGIPIKTRKTMLDLSPSMSL
KVEPGGEDLGPEGELRHDEYPSRLSLKKENYCGGFLDVPQHPYSWSKPKPYLSPSLPALD
WQLPSCSGPYNLQIEVQPKSHHRAHYETEGSRGAVKALSGGHPVVQLYGYMESEPLTLQL
FIGTADDRLLRPHAFYQVHRITGKTVSTASHEVMQSNTKMLEIPLLPENNMRAIIDCAGI
LKLRNSDIELRKGETDIGRKNTRVRLVFRVHINQPNGRTVSLQVASNPIECSQRSAQELP
LVEKQSVESYPTTGGKMMLLGGLNFLPESKVVFVEKAQDGHHLWETEAKVDKDSVKTNTL
VVEIPPYRNQRISSPVQVNFYVCNGKRKRSQYQRFTYVPANVPIIKTEPTDEYDSLGSVG
LSMHSKPYYGQPRLTSIMPVAEPDPCLVGGYPPCPPRHAAMPPSSPSSSPTLHDLSPVAY
NKCLPNSPTRATPPGTVAPPIQETPCCPSLPYPTSPDHNSSLVVLHSQGSPGSLGYQHSV
YANSSSSSSPVSHPSTPGGPAETPFFQAYSPSQAEASGSSAQAAGSPPSLLAEDATPPSM
DITIKQEPQELDQMYLDDVAARSAETYRAVGEQVYVRRGNARNR
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatacctccagcctgagcgtcaaagccaagttcaacttcggagcagcagcagca
gcagcagcagcagcagccggacaggagcggggactccagcgtctcaaatctaccgccgcc
gccgatatgaagtctgcagaggaagatgcatacaactacacaccaaacgtgagtcttcca
attggcatgagcaacccatgcctgtctacgcagtaccacaccttgcagtccagtcctgtc
atcccggtctcctcttgccaccagactggctacagtgtccaaaatgacaaccatgccgcg
tcaagttactacctgcctcaagccttgagacccaacggtgctccggctctggaaagccct
cgtatagagatcaccgcctatagccaatacccggaggatgaagtagaagccagcggcaga
gaagatcacatcatcaaacgaggcgtcaactccattgtcacactgacgctgccgaatgtg
gatgggtaccgtgatccaagctgtctaagccccgcgagcagcatatcctctcgcagctgt
aactcagaggcctcgtcctacgaatctggcttttacaactacgacaattccccgcagaac
tctccctggcagtcacccagcgtttcgcccagagggtcatcctcacttctgtcttgtcca
catgccatcggtcccgcagcctctcctcaccattcgccctccaactccccccaaataggc
gcaatggcagaggagggatggccagcgcagccacgtgggtcccggccgaattccccctcc
tgcagtggagttggcggaggcaacagcggtggcataggcaagagaaaatacagtttcagc
ggctcctcttaccagcagacatcatgctcacccaaccaatcacccaccccttcttcacat
ggttctccgagggtcagcgtcacagatgagaactggcttaccaacaccaaccagtacacc
aaccttgccattgtagcggctattaatgctctcaccacagatggaatggctgacatgggg
gaaggaattccaatcaagacacggaagaccatgctggatctctcaccatccatgagtctg
aaggtggaacccggaggtgaggacctgggtccagaaggggagcttcgacatgacgagtac
ccttcccgccttagcctcaagaaggagaattactgtggagggtttctggatgtaccacag
catccatactcctggtctaaacccaagccttacctcagcccctcactgccggctcttgac
tggcagctgccgtcctgctccggtccgtacaacctgcagattgaggtgcagccaaagtcc
caccacagggcccattatgagacggagggaagccgaggagccgtgaaggcgctgtctggg
ggacaccctgtggttcagctttacggctacatggaaagcgagccgctcaccctgcagctt
ttcatcgggaccgcagacgatcgcctcctgcgaccgcatgccttctaccaggtccaccgg
atcaccggcaaaaccgtctccactgccagccacgaagtcatgcaatccaacaccaagatg
ctggagatccctctgctgccagaaaacaacatgagagccataatcgactgcgcaggaatc
ctgaagctgcgcaattccgacatcgaactgcgcaaaggggagacggacatcggtcggaaa
aacacccgcgtgcgattggtgtttcgtgtgcacatcaaccagcccaacggcaggacggtg
tccctacaagtcgcatcaaaccccattgaatgctctcagcgctcagctcaggagcttccc
ttggtggagaagcagagcgtggagagctatcccaccaccggaggcaaaatgatgctcctc
ggcggcctcaacttcctccccgagtccaaggtggtgttcgtggagaaggcacaggacggc
catcatttgtgggagacagaagccaaggttgacaaggactctgtcaaaactaatactctc
gttgtggagatcccaccctacaggaaccagagaatatccagtcctgtgcaagtcaacttc
tacgtctgcaacggcaagaggaagaggagccagtaccagcgcttcacctacgtgcctgca
aacgtaccaataataaaaaccgagcccactgatgagtatgattctcttgggagtgttggg
ctgtctatgcattcaaagccctactacggccagcccaggctgacgtccatcatgcctgtt
gctgaacctgacccctgcctggttggtggctaccctccttgcccgccccgccatgctgcc
atgccaccgtcgtctcccagctcaagccccaccctgcacgatctgtcccctgttgcatac
aacaaatgcctccccaacagcccaactcgtgccacaccaccaggcactgtagcgcccccc
attcaggagaccccttgctgtccaagccttccgtacccgacatcgccagatcacaactct
tccctagtggtgctccactcccagggcagcccgggctcccttggttaccagcattccgtc
tatgccaacagcagttcctcgtcctccccagtgtctcacccttccactcctggcgggcca
gcggagacaccattttttcaagcgtacagccccagccaggcagaggcttcaggcagctca
gcccaggctgcaggaagtccgcccagtctgctagctgaagacgccactcctccttcaatg
gacattaccatcaagcaagagccccaggaactggatcagatgtatctcgatgatgtggcc
gctcgcagcgccgagacttaccgagcagtgggtgaacaggtttacgttaggagagggaat
gcacgtaaccgctga
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