Xiphophorus couchianus (Monterrey platyfish): 114145395
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Entry
114145395 CDS
T05908
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114145395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114145395
03016 Transfer RNA biogenesis [BR:
xco03016
]
114145395
03012 Translation factors [BR:
xco03012
]
114145395
04131 Membrane trafficking [BR:
xco04131
]
114145395
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114145395
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
114145395
Transfer RNA biogenesis [BR:
xco03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
114145395
Translation factors [BR:
xco03012
]
Eukaryotic type
Elongation factors
114145395
Membrane trafficking [BR:
xco04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
114145395
Exosome [BR:
xco04147
]
Exosomal proteins
Proteins found in most exosomes
114145395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
114145395
NCBI-ProteinID:
XP_027874734
LinkDB
All DBs
Position
5:17192645..17199355
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSPNMAWFKGWKINRKDGSASGTTLLEALDAIQPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALS
EALPGDNVGFNVKNVSVKDIRRGNVAGDSRNDPPQEAAGFTSQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKAVEKKAPTSGKITKSAQKAQKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagaagctccacattaacattgtggttataggacatgtggactcagggaag
tccaccaccacgggccacctcatctacaagtgtgggggcatcgacaaaagaacgattgag
aagtttgagaaggaagctgcagagatgggaaaaggatcctttaaatatgcctgggttttg
gacaaactcaaggcagagcgcgaacgtggaatcaccattgacatctctctctggaagttt
gagacaagcaagtattatgtcaccatcattgacgctccgggacacagagacttcatcaag
aacatgatcactgggacatcccaggctgactgtgctgtgttgattgtggctgcgggtgtg
ggcgagtttgaagctggcatctcaaagaacgggcagactcgtgagcatgccttacttgcc
tacactctgggagtgaagcagctcatcgtaggtgtcaacaagatggattcaactgagccc
aactacagccagaagcgctatgaagagattgtgaaggaagtcagtacttacatcaagaag
attgggtacaatcccgacaccgtggcttttgtacccatctcaggctggaatggagacaac
atgttggagcccagtcctaatatggcctggttcaaaggctggaagatcaatcgtaaagat
ggcagtgcctcaggcaccactctgctggaggctcttgatgccatccagcctccaacccga
cccactgacaagcctcttcgtctgcccctgcaggacgtttacaaaattggaggtattggt
actgtgcctgtgggtcgagtagaaacaggaatcctgaaacctggtatggtggtgactttt
gctcccgtcaatgtgaccactgaagtcaagtcagtggagatgcaccatgaggccctgagt
gaggcgctacctggagacaatgtgggctttaatgtcaagaacgtctctgtgaaggatatt
cgccgaggtaatgtggctggagacagcaggaacgacccaccacaagaggcagctggcttc
acctcccaggtgattatcctgaaccaccctggtcaaatcagtgctggctatgcccctgtg
cttgactgccacactgcacatatcgcttgcaagtttgcagagctgaaggaaaagatagac
cgccgctctggaaagaagctggaggataacccgaagtttctcaaatctggagatgctgct
attgtggatatgatcccaggcaagcctatgtgtgtggagagcttctctgagtacccaccg
ctcggccgttttgctgtccgagacatgcgtcaaacggtggcggtgggagtgataaaagcc
gtggaaaagaaagcccctacaagcggtaaaatcaccaaatctgcacagaaggcacagaag
gccaaatga
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