Xiphophorus couchianus (Monterrey platyfish): 114145623
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Entry
114145623 CDS
T05908
Name
(RefSeq) FERM and PDZ domain-containing protein 1-like
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114145623
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Other domain-containing proteins
FERM domain-containing proteins
114145623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
FERM_C_FAK1
FERM_f0
PDZ_2
RA_3
SNX17-27-31_F1_FERM
Motif
Other DBs
NCBI-GeneID:
114145623
NCBI-ProteinID:
XP_027875077
LinkDB
All DBs
Position
5:18490724..18528915
Genome browser
AA seq
2062 aa
AA seq
DB search
MESQDRSRSPSRRTSRVEQVVGRWLRRSRDLGSRSHSLSRDRAAVDGKTGESGSSDQRNY
PFRFNVQIQKDPDLNSHGLTLSSQIPILVQEVTTGGPADGRLVPGDQLVKINNVAVDDLT
PEQAAEIIRECRDTLTMTVLRIMHGPKSSFITPEKRAKLRSNPVKVHFAEEVEVNGQSQG
NSLLFLPNVLKVYLENGQTKAFKFETSTTVKDIVMTLKEKLSLNRIEHFSLVLEQQHNSS
KLLLLHEEERIHQVVQKKEVHNYRCLFRVCFMPKDFKTLLQEDPTAFEYLYLQGVNDVLQ
ERYAVEMRCNTALRLAALHIQERLVSCGLSPKANLKMITKTWGIENFVSSTLLRNMREKD
LRKAIGFHMKKTQSQHDPKQKSLSVDQARINYLEELSDLKSFGGKSFGATLMLQDRESMV
SLLVGARYGVSQVVNHKLSIMTTLTEFNSITRVELLPESDKVSLVKIYLQDIKPITLLLE
AGAAKDISCLIAGYCRVFIDPNLNVFPWIDDKKHRVSAEEGYVSRCASDSEDSSDLDMEP
LYSLMSQDDKPRTRVRSLSDSEGRKRKDRDRMRSKDCKEKGDAPVENKKPKQEKYLDTPR
ASASLGNGKEGNNENTLNRKRSGAKIQIQITGNDSGGHIVSPGTGEVEQPSVSEASDSCH
TDSRVLTSPSSDSLDALEEDDLISCTSSSVQTQALSQAHVCVHSPFQLHLHSDGHVQPHL
LAPPPPHSHPLIHLTVVSCAGESGERGDSRRSGDGADPKLLSSPSLSPKGQKRSGELCSA
DSSLCFAELSRLADLLPSPPEASEDDDVEDDELRRKGKLQSNISVTLRKADEGGSVGEHP
LSTSPSSPSSHNDFVFNFDQSDARCYYNLCSNITPDSARSLPGPQDPIIHKDEAKAGGSE
LIPILQPPPGFGDSSSDEEFFDARDRFTSPEDPTSGAVPRGSQTEMKLDTVSILSLSDIR
VSVTDTEMDKREDQEERESNESTFLLRKKSRKRRSFMETDYTSRVTYPETDIESESNLNS
YRFLKNISTGPNDNSTLTLDPEPSGQTQNPSPTTSSLTHSEGEPAQLESKPILSKLCSHD
PGFLSASEKNRNLSPPSRTRKQEMEMEPDAMESKSVTDLVKVVPPTITVVRCRVDPDGKE
SADRRGDGKEEGEDQEEIGEKTEEAEKENPAGLTGNGPLNSHTFLPDTVEEHGKEEKKET
VFDLSSSLKRPLVGAEIPQGAIIMPNSFTEVNEKLVTAHINKHVDKNFLSLISPPPPPPS
PLLPQTPPALKPETELLIKEAEISKNIPTSINPTAVAPKEQNNNHCGSAKLLKQVLISVN
DEELIHESTESSNSDNVFDDEDDADASNSLSYTSGKKPKDRTVSANSCLGNYLTQGTTDE
THIRAQLLLNLELQNRDHSVNADHILAIKSIRAKLGAATSIMSSLNSGTALKNTVTPKPK
SDSTLMSSGPAESLGSPGIVMAKAATLNDLSKELLPPSRFILQTCSPSIMGRLSASTLRG
KIQNLPLYLSRSQENLTQAGVGSSASSPAEEASSDNACTTDNVPNITQTLDLETCLAPDS
VESDDSDATLTGSELDGEFFVETTAAKISPLASEKKEDSCQLPVQTEPKQHHQTLCSRPN
DNTPGPITEPPASITSLFQRNTSGLNTNIPGPVTDAPELNIKVNSLQEDIPGYKGSNQSP
IVVTTQNLNGPQLAFHGQSQKARTSSDRPLMGLCSPLEQTSDPSKVSSAGCRVFTICEDL
SQTSTPADLVATTPLKSEFGCSSILASGCESVAEGIQVPLDACGCPASYTDCFSGEDSFD
DELTVYEFSCRSQNSGISQTSRAGLHLITSPPVPSFISASSTLSPSFPQTILFSSSTSEL
SPLLSPHSDTSESYLSETHKDTLTHLGQQHYPEPPKGFQVLRRDVDKLLSILEGSGGSDR
SVAGLGGRHSRDTCPAHFTENKRVLQLEARRLMSSCQKVAGTGQSPEEMLQFLADSFRTL
VELATVCLWFSGCERCDRRNTEAVAGLADVARSFRDFCLAAERASSKRSCQDLSTKLLAK
QCTALTASVFCLTQLFRTLTAL
NT seq
6189 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcaggacaggagtcgctccccgtcccgcagaaccagccgagtggaacaggtg
gtgggacgatggctgagacgttccagagatttgggcagcaggtctcactctctgagcaga
gatcgtgctgcagtggatgggaaaacaggagagtccggtagctccgatcagagaaattac
ccgttccgattcaatgttcagatccaaaaggacccggacctcaactcccatggcctcacg
ctttccagccagatccccatcctggtgcaggaagtcaccacaggtggtcctgcagatggc
cggctcgtccctggcgaccagcttgtgaaaatcaataacgtggctgtcgatgatctgacc
ccagagcaagctgctgaaataatcagggagtgtcgagacacgctgaccatgactgtcctc
agaatcatgcatggcccgaagtcgtcgttcatcacacctgaaaagagggccaagctccgg
tccaaccctgtcaaagtccactttgcagaggaggtggaggtcaatggacagtctcagggg
aactcgctactcttcctgcccaacgttttgaaggtgtatctggagaacgggcagactaag
gctttcaagtttgagaccagcacaactgtcaaggatattgtgatgacactaaaggaaaaa
ctttcactgaaccgaattgaacacttttccttggtgctcgaacagcagcacaacagcagc
aagctgctgctgctacatgaagaggagaggatacaccaggtggtccagaagaaggaagtc
cataactacaggtgtttgttccgtgtttgtttcatgcccaaagatttcaagacactgctg
caggaggatcccactgcctttgagtatctttaccttcagggggtgaacgatgtgctccag
gaacgctacgccgttgaaatgcggtgtaataccgccttaagacttgctgcgctgcacatt
caggagaggctggtgagctgcggactgtcccccaaagccaacctgaagatgatcacgaag
acttggggcatagaaaattttgtgtcgtccaccttactgaggaacatgcgagaaaaagat
ctgaggaaggcaattggctttcacatgaagaaaacccagtcccagcatgatcccaagcaa
aagagcctgtcagtagatcaagcacgaatcaactatctagaggaactgagtgatctgaag
tccttcgggggaaagtcctttggtgccaccttgatgcttcaagacagggagtcaatggtg
agcctgctggttggcgcgcgctatggggtgagtcaggtggtcaaccacaagctgagtatc
atgacgacccttacagagttcaacagcatcactcgcgtcgagctgctaccggaatcagac
aaagtcagcctcgtcaagatatacctgcaggacatcaagcccatcacattactattggag
gctggtgcagcaaaagatatatcttgccttatagcaggctactgccgtgtgtttattgac
cctaacctcaacgttttcccctggatagatgacaagaaacacagagtttctgctgaagaa
ggttatgtgtcaagatgtgcaagtgactcagaggactcttcagacttggatatggagccg
ctgtacagcttgatgtctcaagatgacaaacctcgcactcgtgttagatccctgtcagac
tctgaaggaagaaagaggaaggacagggaccggatgagaagcaaagactgcaaagagaag
ggagacgcacctgtggagaataaaaaaccaaaacaagaaaaatatcttgatactccaaga
gcgtctgcttcattaggaaacggtaaagagggaaataatgagaacacattgaacagaaag
aggtctggtgcaaaaatacagattcaaataacgggcaatgattcagggggtcatatagta
agccctggaactggagaggtagagcaaccgtctgtatcagaagcatcagactcatgtcac
actgactctcgtgtcctcaccagtccctccagtgactctcttgatgctctggaggaagac
gatttaatttcgtgcacctcctcttctgtccagactcaagctctctcacaagctcatgtc
tgcgtccactccccttttcagcttcacctccactctgacggacatgttcagcctcacctc
ctcgctcctccaccacctcactctcatcccctcattcacctcacagttgttagctgtgcc
ggagaatcaggagaaagaggagacagcaggagatctggtgatggagctgatcccaaactt
ctgtcctccccatccctcagccccaaaggtcaaaaacgttcaggtgaactctgctcagca
gacagctcgctgtgtttcgctgagctctcccgtctcgcagatctcctgccgagccctcct
gaggctagcgaggatgatgatgtcgaagatgacgagctgaggcggaagggaaagttacag
agcaatataagcgtgacactgagaaaggcagatgaaggtggaagtgttggagagcatcct
ctctccacttctccgtcatccccgtcttcccacaacgactttgtttttaactttgaccaa
agcgatgctcgctgctactacaacctatgctccaacatcacccctgacagcgctcgcagc
cttccaggccctcaggatcctatcatccataaggatgaagcgaaggctggtggatctgag
ctaattcccatcctccagccgccccctggattcggggacagcagctcagatgaggagttt
tttgatgcaagagatcgcttcacctcacctgaagatcccacgtcaggtgccgtcccgaga
ggcagtcaaacagaaatgaagctggacaccgtgagcattctcagccttagtgatatcaga
gtctctgtaacggacacagaaatggacaaacgggaagaccaagaggaaagagaaagcaat
gagtcaacatttctcctccggaagaagtccagaaagcggcgctctttcatggaaactgat
tacacctcgagagttacgtatccagaaactgatattgaatcggagtccaatttaaactct
tacaggtttcttaaaaacatttcgacaggcccaaatgataattcaacacttactttagat
ccagaaccctcggggcaaacccaaaatcccagccctaccacctcctcactcactcattct
gaaggagagccagctcagctcgagtccaaacccatcctgtcaaagctttgctcacatgac
ccaggatttctgtctgcttctgaaaagaataggaatctaagccccccctccagaaccagg
aagcaggaaatggagatggaaccagatgcaatggaatccaaatcagtcacagatttggta
aaggtggttcctcctactatcaccgtcgtccgctgccgggttgatccagatggaaaagag
agcgcagatcggagaggtgacggaaaggaggaaggggaagatcaggaagagattggtgag
aaaacagaagaagcagagaaggaaaacccagcaggtttgacaggaaatggaccacttaat
agtcatacatttttgcccgatacagttgaggagcacgggaaagaagaaaagaaagagact
gtgtttgacttatcatccagtttaaagagaccccttgtgggtgctgaaataccacagggt
gcaatcataatgcctaatagttttacagaagtgaatgaaaagttggtcactgcacatata
aacaaacatgttgataagaatttcctttcactgatttcaccacctcctcctccaccatca
ccgcttctccctcaaacacctcctgcacttaaaccagaaacagagcttttgataaaagag
gcagaaatctccaaaaacataccaacatcaattaatcctactgctgtagctcccaaagaa
cagaataataaccactgtggctctgctaaattattaaaacaggttttaataagtgttaat
gatgaagaactcattcatgaatctacagaaagctctaattcagacaacgtttttgacgat
gaagatgatgcagatgctagtaattccctaagttacacttcgggtaagaaaccgaaagac
aggactgtaagtgcaaacagttgccttggtaattatttaacccagggaactacagatgaa
acacacatcagagctcagcttcttttaaaccttgaactccaaaatagggaccattctgtc
aatgctgatcatattcttgctataaagtcaataagggcaaaactgggagctgcaacaagc
atcatgtcctctcttaactcaggaactgcactgaaaaacacagttacaccaaaaccaaaa
agtgactccaccttgatgagtagtggacctgcagagagtttaggaagtcctggcattgtg
atggcaaaagctgccacactgaatgatctttccaaagagcttctgcccccatctcgtttt
atcttacagacgtgttcaccgagcatcatgggccgcttatctgcctcaacgctaaggggg
aagattcaaaacttgcccctttatctatcacgctcccaagaaaatctaactcaagcaggg
gttgggagttctgcatcgagtccagctgaggaagctagtagtgacaatgcatgtaccacc
gacaacgttcccaacatcacacaaacccttgacttagagacatgcttggcacctgactca
gtcgaatcagatgattccgatgcaacgctgactggatctgaattggatggggagtttttt
gtagaaacaacagcagcaaagatatctcctttggcgtctgagaaaaaagaagatagttgt
cagctgcctgtacagactgagcccaaacagcatcatcaaactctttgttccagacctaat
gacaacacaccaggacccataacagagcctcctgcatccataacaagcctatttcaaaga
aatacttctgggcttaacaccaacattcctggacctgtaacagatgccccagaactaaac
ataaaagtcaacagtctacaggaagacatccccggttacaaagggagcaatcagtctcca
atagtggtgaccacccagaatctgaatggaccacaacttgcttttcatggtcaatctcaa
aaagcaaggacaagcagtgacagacctttgatgggtctttgtagtcccttggagcagact
tcagacccgtcaaaagtatcttctgccggttgcagagtgttcaccatctgtgaggatttg
tctcagacaagtactccagctgacctggttgccactacacccctgaaatcggagtttggt
tgcagttctatacttgcatctgggtgtgagtcagtagcagaggggatccaggtgcccctg
gatgcctgtggctgtccagcatcatatacagactgcttcagtggagaagacagctttgat
gatgagctcacagtctatgagttctcctgccgctctcagaacagtggcatttctcaaact
tccagagcaggtcttcatctgattacatctcctcctgttccctcctttatctctgcctcc
tccaccctttccccatcatttcctcaaaccatccttttctcctcctccacctctgagctc
agccctcttctctcaccccactcagacacctcggaatcctacttgtctgaaacccacaag
gacactctcactcatctgggtcagcagcactacccagaaccccccaaaggcttccaagtt
cttcgcagagatgttgataagcttctatcaattttggaaggtagcggtggctctgatcgt
tctgtggcagggcttggaggtcgtcattcaagggacacatgcccggcacacttcacagag
aacaaacgggttctccagttagaagcacggcggctcatgtctagttgccagaaggtagca
gggactggccagagcccagaggaaatgctccagtttttagctgacagtttccgaaccttg
gtggagctggccaccgtctgcctctggttctctggttgcgaaaggtgcgatcgaagaaac
acagaggcagtcgcaggcctggcagatgttgcccgctcattcagggacttctgcttggcg
gcggagcgagccagcagcaaacgtagttgtcaagacctgagcaccaagctgctagccaaa
cagtgcacagcacttaccgcctccgtcttctgcctcacccagctgtttcgtaccctcact
gcactgtga
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