Xiphophorus couchianus (Monterrey platyfish): 114145633
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Entry
114145633 CDS
T05908
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114145633 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114145633 (herc3)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114145633 (herc3)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
HECT type E3
114145633 (herc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
114145633
NCBI-ProteinID:
XP_027875093
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All DBs
Position
5:4233076..4267157
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AA seq
1049 aa
AA seq
DB search
MLCWGNARDGQLGIGAERNPAFEPRSCHVFSGRGLKEVVCGGQHTLFLLHDGSVYTCGSN
SCGQLGHNRDGTSPELVGALDTQKITMVSCGRAHSMAISEQGQVFAWGAGEGGQLGLGTV
EAAVRIPRLVKRLCDHSISQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGEPSKLTP
HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS
QKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNIELLPRRVLELMGTEVSQIAC
GRHHTLALVPSSSMVYAFGCNSHGQLGTGILGDSRSPFPVKSSFLTGNLQRRDSKQYTVV
KIICGGDHSFLLYSNEQSSAATEDFRVVNVSKSLAPINYEQLNSWRLKMMYSTDSAVAND
IVIQLSSTACWNASFLDQSDDTHFKTNPKIPGIDLNSVRTLFEVLCKPAFSGLLEQASKS
FESLLIPQLPRSPPDVEAMRIYLILSEYPALQDSKNYIRLTIPLAMAILRLDANPSKVLD
NWWCFMDGSFFTRMVDMYKHIVVFMLTGGKTILVPVFYDNYFLATLQLLEKLHKVNLRAN
HVEYSRFYIPDISSLVDIQEDYLKWFLTKAEIKMGSSPSQQNDFPSVNLCAFPFILNAQA
KTTMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRNHLVSDTLRELTM
YSDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLDPVYGMFTHYKDSNLLWFSDKC
FVEQNWFHLIGIVCGLAIYNSTVVDLHFPLALYKKLLDVTPSLDDFKELSPTEARSLQQL
LDYEGGDVEETFLLSFAITRENYGMTEVKELIPGGESIAVDKNNRKEFVEAYLRYVFSDS
VSEQYSAFSAGFLKVCGGEILLLFQPSELMAMVVGNNNYNWEELEKNAVYKGEYTATHPT
VRLFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIVIQSTTAEEHYLPVAHTCYNL
LDMPRYQTKETLRRRLTQAVEQYEGFSLV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctgggggaacgccagggatgggcagctgggcatcggcgcggagaggaacccc
gcgtttgagcccaggagctgccatgtgttcagcgggcggggactgaaggaggtcgtgtgc
ggagggcagcacacgctgttcctgctgcacgacggcagcgtttacacgtgtggctccaac
agttgcggacagctgggccacaacagagatgggacgtccccagagctggttggggctctg
gatacccagaagataacgatggtgtcgtgtggccgggcgcattcgatggccatcagtgag
cagggtcaggtgtttgcatggggagccggagaaggcgggcagctcggcctggggacagtg
gaggcggccgttcgaatcccgaggttggtcaaaaggctttgtgaccacagcatctcccaa
gtgatgtgtgggaaccagcactgtatcgcactttctagagatggtcagctgttcacttgg
ggtcagaacaccagcggccagctgggtctgggtaaaggagagccaagcaaactgacgcct
catcccctaaagtccctggcagggattcctctggctcagataactgctggaggagaccac
agttttgccctctccctgtcgggagccgtcttcggatggggcaaaaacagggcggggcaa
cttggactgaatgacaaacaagatcgagccgtcccgtgtcacatcaagtttctgagatca
caaaaagttgtttatatcagctgtggagatgagcacaccgctgccctcacaaaggacgga
ggcctgtttacgtttggcgacggctcatggggtcagctgggtcacggctccaccaacatt
gagcttctaccgaggcgggttctggagctgatgggcactgaggtttcccagatcgcctgt
ggcaggcaccacactctggccttagtcccgtcgtctagcatggtttatgcattcggctgc
aacagccacggccagctgggcacgggaatcctgggggattcaagaagcccgtttcccgtc
aagtccagtttcctgactggaaacctgcagagaagagattcaaagcaatatacagttgta
aaaatcatatgtggaggagaccacagtttcttattgtactccaatgaacagagttctgct
gccacagaggacttcagagtggttaatgtcagtaaaagcctcgccccgatcaactacgaa
cagttaaactcatggagattaaaaatgatgtacagcacagactctgctgttgcaaatgac
attgtgatccagctctcctccacagcctgttggaacgccagcttcctggaccaaagtgat
gacactcacttcaagaccaacccaaagatcccgggtattgatctgaactcggtcagaacg
ctgtttgaggttctctgcaaaccggccttctctggactcctggaacaggcctccaagagt
tttgagagcctgctgatcccccaactaccccgctcgccaccggacgttgaggccatgagg
atctacctcatcttgtccgagtaccctgccctgcaggactccaagaactacatccgtctc
actattcccctggcaatggctattctccgactagacgccaaccccagcaaagtattggat
aactggtggtgctttatggacggcagcttcttcaccagaatggttgacatgtacaaacac
atcgttgtgttcatgctgacgggcggcaagacgatcctggtgcccgtcttctacgataac
tacttcctggccacgctgcagctgctggagaaactccacaaggtaaacttaagggcgaat
catgtggagtacagtcgcttttatatcccagacatcagcagcctggtggacatccaggag
gactacctcaaatggtttctgactaaagctgagattaaaatgggctcctccccctcacag
cagaacgactttccctcagtgaacctctgtgccttcccgttcatcctgaacgcccaagcc
aagacgacaatgctgcaaacagatgctgaactgcaaatgcagatggccgtcagcggtgca
aatctgcacaacgtcttcatgctgctcacgctggagccccacctcgctaggaacccatat
ctggtgctgcatgtgcgcaggaaccatttagtcagtgacacgctgcgagagctcaccatg
tactctgatgtggatctcaagaagcccctcaaggtgatctttgatggcgaggaagccgta
gacgcaggcggcgtaactaaagagttcttcctgctgctgctaaaggagcttctggatcct
gtttatgggatgttcactcattataaagactccaacctgctgtggttctctgacaaatgt
tttgtggagcagaactggtttcatctgatcgggatcgtctgcggtctggccatctataac
tccactgtggtggatctgcactttcctctggcgctctacaagaagctgctggacgtgacg
ccttcactggacgatttcaaagagctctcgccaacagaagccaggagtcttcagcaactt
ctagactatgaaggaggagacgtagaagagacgtttcttctcagctttgctatcaccagg
gaaaactacgggatgacagaagtcaaggagctgattcctggaggagagagcatcgctgtg
gacaaaaacaacaggaaggagtttgtggaggcctacctgcgctacgtgttctccgactcg
gtgagcgaacagtactcggccttctccgccggcttcctgaaagtgtgcggaggggagatc
ctgttgctgttccagccctctgagctgatggccatggtggtcgggaacaacaattacaac
tgggaggagctggaaaagaacgctgtttacaaaggggagtataccgccactcacccgaca
gtccgacttttctgggaggttttccacgaattcccgctggagaagaagaagcagttctta
ttgttcctgacgggaagcgaccgcatccccatccacggcatggagagcctccgcatcgtc
atccagtccaccacggcggaggaacactacctgcccgtggctcacacctgctacaacctg
ctggacatgccgcgctaccagaccaaagagacgctgcgccgccgcctgactcaggccgtg
gagcagtacgagggcttcagcctggtctga
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