Xiphophorus couchianus (Monterrey platyfish): 114145776
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Entry
114145776 CDS
T05908
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114145776
04121 Ubiquitin system [BR:
xco04121
]
114145776
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
114145776
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
114145776
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
CTD6
Motif
Other DBs
NCBI-GeneID:
114145776
NCBI-ProteinID:
XP_027875153
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All DBs
Position
6:complement(28654407..28657304)
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AA seq
519 aa
AA seq
DB search
MIITDMRPLSVVEDEGFQKMISTFNPNYTPPSRTYLVKMMEKKYEEIKDKLKNILKETDS
IALTADIWTSVATEAYLGVTCHFLGEDWKMKSHTLTTMPLEERHTAANIAEWLEEVIAKF
DVPPEKVRAVIHDNGANIVAAVKILAEKHKWASVRCAGHTLNLVVQNALKSNQSISKCVA
AARCLVEHLKKSELACTKLKDKQQQMGTASHMLIQDVSTRWNSTIHMLCRLLEQRWPITA
ALSDPALTPRGKHYLDLKPEQWNIIEEISKALQPFEEATVFLSGQDYVTLSALPQLVQSL
KKSIQTQVFETAPAQSYQAEVMAQITTRWEGLFMCQPQSSNTVVLTAALDPRFKKLKFLP
PDEAFKIQSMVQTMVLDVKKKMRQKNSGENEVSTDAQDKPVEHQQNTNTFFSNLLGSSES
STSDEEDEEQHLNQDVQKEVLMYFGEHTLSKRENPLLWWKSNAARYPKLAKFFLCIPATS
TPSERLFSAAGNIASKRRASLSSQHVDMLTFLHSNHSLL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcacagacatgcgaccgctgtccgtggtggaagatgaaggattccagaagatg
atctccaccttcaatccaaattatacccctccttccagaacctacttagtaaaaatgatg
gagaaaaagtatgaagaaatcaaagacaaattgaaaaacatcctaaaagagacagacagc
attgctctcacagcagacatttggacaagtgttgccacagaggcatatcttggagtgaca
tgccactttcttggagaggactggaaaatgaagtcccacaccctgacaacaatgccactt
gaagaaagacacacagcagcaaacattgcagagtggcttgaggaggttattgcaaagttt
gatgttccacctgagaaagtcagagctgtcatccatgataatggtgccaatattgtagca
gcagtgaagattttggcagaaaagcataagtgggcatctgtgcgatgtgcagggcacacc
ctgaacttggtggtacagaatgctctgaagagcaaccagagcatctcaaagtgtgtggca
gctgcaagatgtcttgttgaacatttaaaaaaaagtgaactggcttgcacaaagctgaag
gataagcaacagcaaatgggcacagcatcacacatgctcatacaagatgtaagcactcgt
tggaacagtactatccacatgctgtgtaggctgctggagcaaagatggccgataactgct
gcactatctgacccagcattgacaccacgaggaaaacactaccttgatcttaagccagag
cagtggaatattatagaggagataagcaaggctcttcagccatttgaagaagcaacggtg
tttctgagtgggcaagactacgttactctttctgcacttccacaacttgtgcaaagcctc
aagaagtccatacagacccaagtgtttgagactgcaccagctcagtcataccaagctgaa
gtgatggcacagatcacaacaagatgggaaggactatttatgtgtcagcctcaatcctca
aatactgttgtacttactgctgctttagatcccagatttaagaaacttaagttcttgccc
ccagatgaagcctttaagatccaaagcatggttcaaacaatggtccttgatgtcaaaaag
aaaatgagacagaaaaattcaggtgaaaatgaggtctccactgatgcccaagacaagcct
gtagagcatcaacagaacaccaacacatttttcagcaatctactgggttcttcagaatcc
agcacaagtgatgaggaggatgaggaacagcatttgaaccaagatgttcaaaaggaagtc
ttgatgtactttggagagcatacactgtccaagagggagaacccacttctatggtggaaa
tcaaatgcagcacggtacccaaaacttgcaaagttctttctgtgtataccagcaacatca
acaccatcagaacggcttttttccgcagcagggaacatcgcatcgaagcgcagggcaagc
ctcagttcacaacatgtcgacatgctcactttccttcacagcaaccatagtcttctttaa
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