Xiphophorus couchianus (Monterrey platyfish): 114145863
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Entry
114145863 CDS
T05908
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114145863
Enzymes [BR:
xco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
114145863
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
114145863
Prokaryotic type
114145863
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
114145863
NCBI-ProteinID:
XP_027875309
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Position
6:complement(3907847..3915009)
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AA seq
540 aa
AA seq
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MLLRVWKRSHPRLARLPSRARRPKLFFASFGGVTMSEKKRKAPTAAGGKEPSAKQPKLEK
AEKAAGWLQSLVKRQREDTKDTKFNEKRQRFLTDTEKMKQGSEGVLYWMQRDQRVQDNWA
LIRAQQLATKEGLPLHVCFCLVVPKSELSTLRHYAFLLKGLQEVATDCKRLNVQFHLLRG
APGEVLPGFVSDRGLGAVVTDFSPLREPQQWLNDVKKKLSKDIPLIQVDAHNIVPCWVAS
PKLEYAARTIRGKITKLLPEFLTDFLPVEKHQHTATRTAKPVDWEQTLASLDVDRTVGEP
QWAKPGSEAGMAMLESFIDVRLKLFATQRNDPNTAALSQLSPWIRFGQLSAQRVALQVRR
CGKNASESVAAFIEELVVRRELTDNFCFYNEKYDKVEGAYEWAQKTLKDHAKDKRDNIYT
REQLEKAQTHDKLWNGAQYQMVVEGKMHGFLRMYWAKKILEWTCSPEEALSIALYLNDRY
ELDGQDPNGFVGCMWSICGIHDQGWAERPVFGKIRYMNYKGCLRKFKVAQFERKYWPKKA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgctgctccgtgtgtggaaaagatctcacccgaggctcgcgcgactccccagtcgggct
cgcagaccgaaactcttcttcgcttcattcggcggagtcaccatgtcggagaaaaaacgc
aaggcgccgactgcggcgggaggcaaggagcccagcgccaagcagccgaagctggagaag
gcggagaaagccgcgggctggctgcagagcctggtgaagcggcagagggaggacacgaag
gacacgaagttcaacgagaagcgccagcggtttctcaccgacacggagaagatgaagcag
ggctcggagggggtgctgtactggatgcagagagaccagagggtgcaagataactgggcc
ttgatccgtgcgcaacagttggctacaaaggaagggctccccctgcacgtgtgtttctgt
ctggtggtcccgaaatcggagctgtccacactgagacattacgcttttctgctgaaggga
ctgcaagaagtcgcgacggactgcaagcggctgaacgtccagttccacctgctgcgcggg
gctccgggggaagtgctgcccggcttcgtgtctgatcgcggtctgggcgccgtggtgacc
gacttctcccccctcagagagcctcagcagtggctgaacgacgtcaaaaagaagctctcc
aaggacatccccctcatacaggttgatgcccataacattgttccctgctgggtagcttca
cccaagctggagtacgctgccagaaccatcagaggaaaaatcaccaaacttctgcctgag
ttcctcactgattttcttcctgtagagaaacaccaacacactgccacgagaacagccaaa
cctgtagactgggagcagaccctggcctccctggatgttgacagaacagtaggggagcct
cagtgggccaagcccggctcggaagctggcatggccatgctggagtccttcatcgatgtc
cgcctgaagctgttcgccacccagcgcaacgaccccaacacggccgctctcagccagctc
tccccgtggatccgcttcggccagctttcagcccagcgtgtggcactgcaggtccggcgc
tgcgggaaaaacgccagcgagtctgtggccgccttcatcgaggagctggtggtgcgccgg
gagctgaccgacaacttctgcttctacaacgagaagtacgacaaagtggaaggtgcttat
gagtgggcccagaagaccctgaaggaccatgctaaagacaagagggacaacatttacacc
cgggagcagctggagaaagcacagacacacgacaagttatggaacggagctcagtaccag
atggtagtggaggggaagatgcacggtttcttgaggatgtactgggccaagaaaatcctg
gagtggacctgctcgccagaggaggcgctctccatcgcgctctacctgaacgaccgctac
gagctggacggtcaggaccccaacggcttcgtcggctgcatgtggtccatctgcggcatc
catgaccagggctgggcggagaggccggtcttcggcaagatccgctacatgaactacaaa
ggctgcctccggaaattcaaagtagctcaatttgagaggaagtactggcccaaaaaggcc
tga
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