Xiphophorus couchianus (Monterrey platyfish): 114145906
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Entry
114145906 CDS
T05908
Symbol
bgn
Name
(RefSeq) biglycan
KO
K08118
biglycan
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114145906 (bgn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xco00535
]
114145906 (bgn)
Proteoglycans [BR:
xco00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
114145906 (bgn)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
LRR_14
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
114145906
NCBI-ProteinID:
XP_027875384
UniProt:
A0A3B5LLS6
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Position
1:16917258..16935228
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AA seq
372 aa
AA seq
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MLPHCSLLLLLCAAQLLSSSSALPFEQRGFWDFALDSLENGGMMSMVRDQEEGSTTEEIL
TPDVPMCPFGCHCQLRVVQCSDLGLTEVPRNIPPDTKFLDLQNNRITELKENDFKGLTNL
YALSVRNNKISKVHPKTFAPLKHMQKLYFSKNLLAAVPKNLPASLVELRIHENRIKKVAA
GTFSGLGNMHCIEMGANPIQNSGFEPGAFKGLKLNYLRISEAKLTGVPKDLPDSLHELHL
DHNQIQAVELEDLSRYRNVQRLGLGFNHIRNIENGSLSFLPMLRELHLDNNRLTRVPQGL
PNMKYLQVVYLHSNNISQVGVDDFCPRGFGMKRTYYNGISLFENPVNYWEVQPATFRCVN
DRFAIQFGNYKK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgttgccacattgctcccttttgttattgctgtgtgcagcccagctgctctctagctcc
tccgctttgccctttgaacagaggggcttttgggactttgccctggacagtctggagaac
ggcgggatgatgtcgatggtgagggatcaggaggaaggctcaaccacggaggagatcctc
actcccgacgttcccatgtgtccatttggatgccactgccagcttcgggtcgtccagtgc
tcggacctcggtttgacagaggtgcccaggaatattcctccagacaccaagtttctggac
ttgcagaacaaccgtatcactgagctaaaagaaaatgacttcaaaggccttactaactta
tatgcactctctgtgaggaataacaagatttccaaagtccatcccaaaacttttgcccct
ttgaagcacatgcagaagctctacttttcaaagaatctgctggccgccgtccccaaaaac
ctgcctgcctctctggttgagctgaggattcacgagaaccgcatcaagaaggtggcagct
ggaaccttctcaggactgggcaacatgcattgcatagaaatgggagcaaaccctatccag
aacagtggttttgagcctggagcctttaaaggactgaaattaaattatctgcgtatatca
gaggccaagctaactggagtgcctaaagatcttccagacagtcttcatgagcttcatctg
gaccacaatcagatccaggctgtggaactggaggacctgagccgctacagaaacgtccag
agattgggtcttggctttaaccatatccgcaatatagagaatggcagcctgtcatttttg
cccatgctgagggagctgcatctggacaacaaccggctcacacgcgttccccaaggcctt
ccgaatatgaagtacctacaggtggtgtacctccactccaacaacatcagtcaggtgggc
gtggacgacttctgcccccgagggttcgggatgaagaggacgtactataacggcatcagc
ctgtttgaaaaccctgtgaactactgggaggtgcagccggcaacattccgctgtgtgaat
gaccggtttgccattcagttcggaaattacaaaaaataa
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