Xiphophorus couchianus (Monterrey platyfish): 114145951
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Entry
114145951 CDS
T05908
Name
(RefSeq) transcription factor HES-1-like
KO
K06054
hairy and enhancer of split 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03460
Fanconi anemia pathway
xco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
114145951
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114145951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114145951
03400 DNA repair and recombination proteins [BR:
xco03400
]
114145951
Transcription factors [BR:
xco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
114145951
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
114145951
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
114145951
NCBI-ProteinID:
XP_027875450
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All DBs
Position
6:3327870..3333427
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AA seq
240 aa
AA seq
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MPAGTFERASPSGVAAVPARGDCTPGKPRTLSENRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRLQMTAALNTDPSILGKYRAGFSECVGE
VTRFLSTCEGVTAEVRTHLLGHLAACVTQINLYGPHLGDLGQTSSTQVTTPPGLRAPLKG
GSLSPEAMKLYGGFQVVASPDGHFAFLIPGAALTPLSVQNCHHVSPVAPAVTSDSVWRPW
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccggtactttcgaaagagcatctccgtctggcgttgcggccgtcccggcaaga
ggcgactgtaccccagggaaaccccgcactctgtcagagaacagaaagtcctccaagcca
attatggagaagcggcgacgcgcgcgcatcaatgagagcctgggtcagctgaagaccctc
atcctggacgcgctcaagaaagacagctccagacactccaagctggagaaggccgacatc
ctggagatgacggtaaagcacctgaggaacctccagcggcttcagatgacagcggcttta
aacacagacccatccatcctggggaagtaccgagctggattcagcgagtgcgttggagag
gttacccgtttcctgtccacgtgtgaaggggtcacggccgaggtgaggactcacctcctc
ggccacctcgcggcctgtgtgacccagattaacctgtatggacctcacctgggcgacctg
ggacagaccagcagtacacaggtcaccacgcctccgggcctgcgggcgcccctcaagggt
ggttcactatcacccgaagccatgaaactgtacggaggcttccaggtggtggcatcgcca
gacggacactttgcgtttcttattcctggcgcagctctcacacctctgagtgtacaaaac
tgccaccatgtgtcacctgtcgcacctgctgtcacctcagactctgtgtggagaccatgg
tag
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