Xiphophorus couchianus (Monterrey platyfish): 114145952
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Entry
114145952 CDS
T05908
Name
(RefSeq) claudin-1-like
KO
K06087
claudin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03272
Virion - Hepatitis viruses
xco04382
Cornified envelope formation
xco04514
Cell adhesion molecules
xco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
114145952
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114145952
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
114145952
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
114145952
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xco03037
]
114145952
04147 Exosome [BR:
xco04147
]
114145952
04515 Cell adhesion molecules [BR:
xco04515
]
114145952
Cilium and associated proteins [BR:
xco03037
]
Other cilia and associated proteins
Stereociliary proteins
114145952
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
114145952
Exosomal proteins of colorectal cancer cells
114145952
Cell adhesion molecules [BR:
xco04515
]
Immunoglobulin superfamily
L1 family
114145952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF1218
OppC_N
TM140
DUF6479
TMEM_230_134
DUF6232
Motif
Other DBs
NCBI-GeneID:
114145952
NCBI-ProteinID:
XP_027875451
LinkDB
All DBs
Position
6:3327868..3351335
Genome browser
AA seq
210 aa
AA seq
DB search
MPNSGVQLLGFSLAFLGFVGTIACTAMVEWKASSYTGSNIITAQAMYEGLWKSCVWQSTG
QIQCKIFDSLLQLPPNIQGTRALMCAAILLCFVSMMVTVVGLECTTCMAEQPQQKSKVAL
AGGVIFIIAGVIALIGTSWYGHRIAQDFYSPLTPTNSRYEFGTALYVGWGAACMCIIGGG
FLCCMCSDRGSSEKGPRYLPSSSAGGRGYV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgccaaactctggagttcagcttcttggcttctccctggccttcctgggcttcgttggg
acaatcgcatgcacggccatggtggagtggaaagcttcgtcgtacacggggagcaacatc
atcacagctcaggccatgtatgagggtctgtggaagagctgcgtgtggcagagcaccggg
cagattcagtgtaaaatcttcgactcgctccttcagctgccaccgaacatacaggggacc
cgggcgctcatgtgtgcagccatcttgctctgcttcgtttccatgatggtgacggtggtg
ggcttggagtgcaccacctgtatggcagaacagccgcagcagaagtccaaggtggctctg
gctggaggagtgatcttcataatagctggtgtgattgccctgattggaacatcctggtac
ggccacagaatagctcaggacttctacagcccattaactcccactaactccaggtatgaa
ttcgggactgccttgtacgtcggatggggagcggcctgcatgtgcatcattggtgggggc
ttcctgtgctgcatgtgctcagacaggggctcctccgagaaaggcccccgctaccttccg
tccagctctgcaggaggcagaggctacgtgtga
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