Xiphophorus couchianus (Monterrey platyfish): 114145974
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Entry
114145974 CDS
T05908
Name
(RefSeq) laminin subunit gamma-2-like
KO
K06246
laminin, gamma 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04382
Cornified envelope formation
xco04510
Focal adhesion
xco04512
ECM-receptor interaction
xco04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114145974
04518 Integrin signaling
114145974
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114145974
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
114145974
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_LMN_ATRN
CCDC39
ATG17_like
EGF_Teneurin
Baculo_PEP_C
DUF1664
Spectrin_7
Fib_alpha
Prominin
FKBP15
Motif
Other DBs
NCBI-GeneID:
114145974
NCBI-ProteinID:
XP_027875495
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Position
6:complement(28932475..>28940081)
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AA seq
846 aa
AA seq
DB search
SSRRSTRDFKPHGNQFAVFCSLIGPFPPGRGYLDNVNLVSARRGDGVAAGWVQTCTCPPG
YEGDFCERCSVGFRRRAPSSGAFSACEPCSCRGGSCDPQTGDCYSADETPGERSCSEGFY
RDPRQQGTCERCPCPERSSCFLEAGALEPQCLRCPQGTFGFYCDTCREGFHGDPTGLRGA
QRPCRPCSCNGHIDVSAAGSCDRNSGECLKCLNNTTGRFCESCLPGFYRNPSASACKPCS
CDLLGSEDGQCDAAGRCRCRAGFQGPRCDRPNCPTCFSPIKKKMELYSIRLKELEFLLSA
PGRVPTNRAEMEATLRAMEDLMQNLQQSAQRLTDQEKTLQTRLSSISGRQLTEEQEIQNI
SETVKRIGQQQRTFKSKVEEVEALIPAMKNLLKEAKTKIQSVELPVRDDPLTSGSLSSLV
QQVTGLADEHKTTAGSVERTANQALNDSKQSLDLIRTLMNKENKVKELIGDLQSLYDKTS
ADVKSLEKRAGSLSEDAKQESKMADGMLKDISRLEKNLPPSMKDAVDAMATRLDALKEAA
QKNMSAVDDLLGAVEEDRTDAEELLDQGQTAQQEFNKLLDRVRAAKAETEKALQGVGTNK
DLDDTLNTLRGFDQQIGDSKAESDEAVKRLPNINSTIQEAVGKNGEAQSVLDAASKDHDE
AMGNINTLDDLAKNLQNTAGSLPSADGLVSEADKLNQEAKDLKAGAEQTAAGLKVGLKEA
KELAAGAEEAAAGATAALANAKQSKDAVQETLRSVSDMLANLNSGDVVDEEQLRKLEAAL
GRAEAEVEARLRPRLEEAEDQEEAHRRRLTAINTDIDSILRDIANLEDIRNSIPAGCYNT
PPIEEP
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
agtagcaggagaagcaccagagactttaaaccacatggaaatcagtttgctgtgttttgc
tcactgattggtccctttcctccaggacgcggttaccttgacaacgtgaacctggtttcg
gctcgccgtggggacggcgtcgcggccggctgggtccagacctgcacatgtccaccagga
tatgagggcgacttctgtgagcgctgctcagtcgggttcaggcgccgggcgccgtcatcc
ggggccttcagcgcctgcgagccgtgcagctgcaggggcggcagctgcgacccccagacc
ggagactgctactccgccgacgagacgcccggcgagcggagctgctccgaggggttctac
agagacccgcggcagcaggggacctgtgagcgctgcccctgtccggagaggtcatcctgc
tttctggaggccggagctctggagcctcagtgcctccgctgtccgcagggaacctttggg
ttttactgcgacacctgtcgggagggtttccatggcgaccccacaggtctgcgaggcgcg
cagcgaccctgcagaccctgcagctgcaacggtcacatcgacgtcagcgcggcgggaagc
tgcgaccgcaacagcggagaatgtctgaagtgtttgaacaacacgaccggtcggttctgt
gagagctgcctgcccgggttctaccgcaacccgtccgccagcgcctgcaaaccctgcagc
tgtgacctcctgggctcagaggacggccagtgcgacgcggccggccggtgccggtgccga
gcgggcttccagggtccgaggtgtgaccggcccaactgccccacctgcttcagccccatc
aagaagaagatggagctttactccatcagactgaaagagctggagttcttgttgtctgcg
ccgggtcgggttccgaccaaccgggctgagatggaggcgactctgagagccatggaggat
ctgatgcagaacctgcagcagagcgcccagcggctgacggatcaggagaagacgctgcag
actcgcctgtcgtccatcagcggccgtcagctcactgaagaacaggagatccagaacatc
tcagagacggtcaaacgcatcggccagcagcagcgcaccttcaagtccaaggtggaggag
gtggaggcgctgatccctgccatgaaaaacctcctgaaggaggcaaaaaccaaaatccag
tccgtggaacttcctgtccgcgatgatccgctgacttcaggctcgctgtcctctctggtg
cagcaggtgacaggcctggctgatgaacacaaaacgacggcgggttctgtggagcggacg
gccaatcaggctctgaacgactccaagcagagtctggatctgatccggactctgatgaac
aaggagaacaaagtcaaggagctgattggagatctgcagagtctatacgataaaacctca
gcagatgtgaagagtttggagaagcgagcaggaagtctgagcgaagacgccaaacaggag
agcaagatggccgacggcatgctgaaagacatttccaggctggagaagaacctcccaccg
tctatgaaggatgctgtggacgccatggcaaccaggctggacgccctgaaggaggcggcg
cagaagaacatgtccgccgtggacgatctgctgggcgctgtggaggaagaccggaccgac
gccgaggagctgctggatcagggacaaaccgcccagcaggagttcaacaagctgctggac
cgggtccgcgccgctaaagctgaaaccgagaaggctctgcaaggcgtcggtaccaacaaa
gacctggacgacaccctgaacaccctgagaggtttcgaccagcagatcggcgacagcaaa
gctgaatccgatgaagccgtcaagcgtcttccgaacatcaacagcaccatccaggaagcc
gtgggtaaaaacggcgaggcccagtcggttctggacgcggcatccaaagatcacgacgag
gcgatgggaaacatcaatacgctggacgacttggctaaaaacctccagaacacggccggg
tcactgccgagtgctgacggtttggtgagcgaagccgacaaactgaaccaggaggccaag
gacctgaaggccggagcggagcagacggcagccggtctgaaggtcgggctgaaggaggcc
aaggagctggctgctggagcggaggaggcggctgccggagccaccgcggcgctcgccaac
gccaagcagagcaaagacgccgttcaggaaacactgagatccgtcagcgacatgctggcc
aacctgaactccggagacgttgtggacgaggagcagctgaggaagctggaggcggctctg
ggccgggcggaggcggaggtggaggcccgcctgcggccgcggctggaggaggcggaggac
caggaggaggcgcatcgccgccgcctcaccgccatcaacacggacatcgacagcatcctg
agggacatcgccaacctggaggacatccggaacagcatccctgctggctgctacaacacc
ccgcccatcgaggagccctga
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