Xiphophorus couchianus (Monterrey platyfish): 114146077
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Entry
114146077 CDS
T05908
Name
(RefSeq) nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114146077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114146077
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114146077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
114146077
NCBI-ProteinID:
XP_027875639
LinkDB
All DBs
Position
6:10350834..10375200
Genome browser
AA seq
2472 aa
AA seq
DB search
MAVVLLQALERTELNKLPKGVQNKLEKFVADLQNANEALKTQHERFKADSEQRYFDFEKQ
LTESQEQILSATNDLQILKEENKKLNEELSSLKGIEDETSEEKQPQQQTKAKYEIEAEKR
ELERLLEKRTQEVENLTEDMKRLNEKLTDTNKLKMELQLKLDEIQSSTASVQHREKRMEQ
EKELLEKKVDWLTAELSTKTEELLNTNREKGKEILELQGSLQSSNEQVSRLESQLTSLKE
LSESQSKRAEDLNNKLKQAKDEQVAMEEKYRVELNAHVKLSSLYKGAATDMEAKNQELSR
AVEELSKLIKETGEANKGLEKKVSDAEEQKVRVEAELREKIKKMEKELENATMKAAGKNC
CGPSLTEEQLDSMCPSATAIAAIVKPGMKFFDLYNAYAECQTHLQLEKQETRRVSKVLDE
IVQEVESKAPVLKRQREEYESMQRSMASLCNKLEQARTEIYSLQKEKDEAKQSYDAMERE
KLKAERQLEDSSAQLCNLLVELEEARGNRVSKDDGSSSDISSTSEVNSSSQLSFRSVMEL
QRQNQSLLGRLRELEEEKSRERSREENARITELESVVDKLQKEVEQLREQRNQQKQLADS
NARQRDMFKALLTQSTGFSLPPQGQELILRPSAPATRSTPQRAAAAESSQTIHTKAALKQ
LNDSFALYKKEKAENDRMLNETNDRLQKQLAELRSSHAKLTSQLDFSNKRYEILQETVSA
YRREINALQKSNQTMAATVQRHEHNIHTMVQDLRKANEKLALEQVRVENLTKERDMLRQA
ECRLDKEKEAVLAEQRNQNLLLTNLKTIQLAMERTETETRQRLNNKIEQLEAELASIKTK
LEEEVAQRHTLGRTMDAQLLEAKKQLETQNILLQKTKELLRGSEQQVTALKAQLASASSS
EAATASGTTTTPIIRSAALRAPLRVHSPVPAASPQPGQSEQELSDLKAQLRSAEEQNAEL
AEQLKNANATVEQYRSVVLTLEDSLKKEKESRSPLEVRLKQSEDVQKQLEKKMLEVEKLK
QQELEERKKAVDAVEKQVLELQRSLKASQTEQQDALERAAAAVTQEQKATQNSLLQTKLA
GEAQAKYERELMLHAADVEALQQLKKTSQHEAARKREIEEELKKATSLLQVKTNVWITTE
KRLKEELSSLKSRFEELGKQNSLLLQQMDEMAARSRQQQQQQQQQQLDLSFSEDGKTTEQ
ILEILRFVRREKEIAVAQSEASEGEALRYKQQVEHKDRELKELQEALNAERERMQLTSKT
LCEQQEQLKKMESISALQENNRMLKLDRDKLELELQQAQAKVTKLQSDIAPLHNSLSILS
EKNGSLQADKRLLEDDLKRWKAKVQHLVSQQKEGDAEEKQKITAEKEAQQKRIAQLIEEA
AKLRTELARSNASSNSAQAQLQGLKDSVVRLTSEKDSFKKDLETKNNEILEKNRTITQVK
KIGRRYKTQYEELKAQNDKTAGETSGKNDLKKTQDELHTLKEEAQKRQAEAQKSQQDLEA
AQKEHQQSKEKLQELQTQLTQSQNELTQAQSQLSQAQTQLQQNQSQLALKQKVFDQFKNQ
LQQSQIKLKSVQSLAQARQNQMQQMQEELQQAKEAVQQNAAKEKELQQNHSQEVSNLKTS
LSRAENKVAELQIQRNNLQKTVSEREAEIMKLQEQLIEVKRAHEASQAALTSQSSQSIQA
NDSTAAGDFSQTQHDELTKLKQELSESKNREDQLKLQMAEKEEKTKKAILGAKLKIGQVN
SAKEQLSQENEELKQSKEELEVRMNALKSQYEGRLLRMDRELRELRETQAHSDGREETQD
QGVAKLDQPRSSDQRQISLKSPAQDRGSLSTSEPPTANIRPTPSTQSPSNKPSPSTGSKA
TPRASIRPMVTPAPVPNQTPTATVMPTTQTESQEVLISTGASVHSTSSSLMNPLTSLTQP
TSTQATAFVQPTQQQAANQDAGSSIEADCPSTSSSCMPSTAKTGSKRSRETEEEEEESRP
ESSQTPPNTKKLRLKPTIALQMEGDEELEGELGDMGEQQVSPDDSRELPEEGFQVFSEED
EGVSQSVPSDQGSQGSALIRDVIVIDTDSESRESKEGDQRVEEEDEDEEEDEEEAEGEQE
EDDEEDDDGAADSGMRGGEEHNEESQEAEDEREEAAPSGGSNAEENVSGAPTSSQRPSDP
SQSGEGTSCGADLGSARDYLHHPPTCSTAHSPCSSSLMPRLSQPRRPSPRLFIQAPAPEL
GPPHTQRQPSQLRRPSSGRGPQLTPGLASMPFFDDDDRMVPSTPTLVVPHRTDGFAEAIH
SPQVAGLSTRFRFGPPEDLLQQASASHSDLGQLASQGGLGMYESPLFLAAHDEDGGGRSV
PTTPLQVAAPVTVFTENMPSDSGDNLASQSVPMVTASTGMAAAADDGDEVFMEHEGEGPD
IDVSLDSQMLLESTGQQRDDASLPSTSQDPDTSSDSQPRSVTSQRQTSILSGRGRFLSRT
GAFPRAGRGGAT
NT seq
7419 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgtcttactgcaggccttagagcggacagagttgaacaaactcccgaaaggc
gtccaaaacaagctggagaagtttgtagcagacctgcagaatgctaacgaggcgctaaag
acgcagcatgagcggttcaaagcagacagtgagcaacgatactttgactttgagaaacaa
ctgacagagagccaagaacagatcctttctgccacaaacgacctgcagatcctgaaagag
gagaataaaaaactaaatgaagagctgagctctttgaaaggaatagaggatgagaccagt
gaagaaaaacaaccacaacagcaaacaaaggcaaagtatgaaattgaggcggagaagaga
gaactggagaggctgctggagaagagaacgcaggaggtggagaacctgacagaggacatg
aaacgtctgaatgagaagctgaccgacaccaacaaactaaagatggagctccagctaaag
ctggatgaaatacagtcatcgacagcctctgttcagcaccgagagaaacgaatggagcag
gagaaagagctgctggagaagaaagttgattggttaactgcagagctgtcgaccaaaact
gaggagttactgaacaccaacagagagaaggggaaggagatactggagctgcagggcagt
ctgcagagcagcaacgagcaggtgagcagactggaaagtcagctcacttctctgaaagaa
ctcagcgaaagccaaagtaaaagagctgaagatctcaataacaaactgaaacaggcaaag
gatgaacaggttgctatggaggagaaataccgtgttgagctcaacgctcatgtcaagtta
tcatcactctacaagggtgcagcgactgacatggaggcaaagaaccaggagctgagcaga
gcagtggaggagcttagcaagctgatcaaagagacaggagaagctaacaagggtctggag
aagaaagtttcagatgctgaagagcaaaaggtacgagttgaggccgaacttagagagaag
ataaagaaaatggagaaggagctggaaaatgcaacgatgaaggctgccggaaaaaactgc
tgtgggccttctttgacagaagaacagctggactccatgtgtccatcagcgactgccatc
gctgcaattgtcaagcctggcatgaaatttttcgatctatataatgcatacgcagagtgt
cagacccatctgcagctcgagaagcaggagacgaggagggtgagcaaagtccttgatgaa
atagtgcaggaggtggagtccaaagctcctgtgctcaagcgacagagagaggagtatgag
agcatgcagaggtcaatggcttccctatgcaacaaactggaacaagctcgaacagagatc
tacagtctgcagaaagagaaagatgaagccaagcagagctacgatgccatggagagagag
aaactaaaggctgagaggcaactagaggattcatctgcacagctgtgcaatctcctggtc
gagttggaagaagcgcgcggcaatcgggtgtccaaagacgacggcagctcctccgatatt
tccagcacctcggaggtgaacagctcgagccagctgtcgttccgcagcgtgatggagctc
cagagacagaaccaaagcctgctgggaagactacgggaactggaggaggagaagagcagg
gagcggtccagggaggaaaacgcacgcataacggagttggagtctgttgtggataaacta
cagaaggaggtggagcagctgagagagcagaggaaccagcagaaacagctggccgactcc
aacgctaggcagagagacatgttcaaggctctgctgactcagagcaccggcttcagcttg
cctcctcaaggtcaggagttgattctccgtccttccgccccagctactcgctccactcct
cagagagccgctgcggcagagtccagccagaccattcacacaaaagctgctctaaaacag
ctcaacgactcttttgccttgtataagaaagagaaggctgagaatgaccggatgctgaat
gaaactaacgaccgattgcagaagcagctggcggagctccgctccagccacgccaaactc
acttctcagctggacttcagtaacaagaggtatgagattcttcaggaaactgtgtcagct
taccgcagagagatcaacgcactgcagaagagtaaccaaacaatggccgccacagttcag
cggcacgagcacaacatccatacgatggtccaggacctgaggaaggccaatgaaaaactg
gcactggaacaggtgcgtgtggagaacctgactaaagagagagacatgttgcggcaggca
gagtgtcggctcgataaagaaaaggaagctgttctggctgaacaacgcaaccagaacctt
ctgctgaccaacctgaagaccatacagttggccatggagcgtacagagacggagactcgc
cagcgacttaacaacaaaatagaacagctggaggctgaactggcctcaataaagaccaag
ctggaggaagaagttgctcagcgacacaccctcggacgaaccatggatgcccagttacta
gaagcaaagaagcagctggagacacaaaacatcttgctgcagaagaccaaggagcttctg
cgtggctctgagcagcaggtgaccgcgctgaaagctcagctggcgtctgcgtcttcctcc
gaagccgctaccgcctccggcaccacaaccaccccaatcatcagatctgctgccctgcgg
gctccactcagagtacactccccagtgccagcagcctctccgcagcccggccaatcagag
caggagctttcagacctgaaggctcaactacgaagtgccgaggaacaaaacgctgagctg
gcggagcagctgaagaacgctaatgccacggttgaacagtaccgatctgtagttctaact
ctggaagacagcttgaagaaagaaaaggagtcgcgctctcctctagaggtccgactgaag
cagtcagaggatgtgcagaagcagctggagaagaagatgctagaggtggagaagctgaag
cagcaggaattggaggagaggaagaaggctgtggatgcagtggagaaacaagtgttggag
ctgcagcgcagtctgaaggccagtcagacagaacagcaggacgccctggagagagctgcc
gccgccgtcacacaggaacagaaagccacacagaacagcctgctgcagactaagctagct
ggcgaggcgcaggccaagtacgaacgagagctgatgcttcatgctgccgatgtggaggct
ctgcagcagctgaagaaaacatcccagcacgaagcagcacgcaagagggagattgaagaa
gaactgaagaaagctacttccctcctacaagtgaaaactaatgtctggattacaacggag
aagcgactaaaggaagagctatccagtctgaaatctcgctttgaagaactgggaaaacaa
aatagtctcctgctccagcagatggatgaaatggctgccaggagtcgccagcagcagcag
caacagcagcagcagcaactggatctttcatttagtgaggacggaaaaaccactgaacag
attctggaaatccttcggtttgtgcgtcgcgagaaggagattgctgttgctcagtccgag
gcatctgaaggagaggctcttcgctacaaacagcaagtcgagcacaaagacagagaactg
aaggagctgcaggaagctctaaatgcagagagagagaggatgcaattgaccagcaagact
ctgtgtgagcagcaggaacagctgaagaagatggagagcatcagcgctctgcaagaaaac
aacaggatgctgaaactggaccgagataagctggaactggagcttcagcaggctcaggct
aaagtaacaaagctacagtcagacatcgctcccctgcataactctctgtctatactgtcg
gagaaaaatggttccctgcaggctgataagaggctgctggaggacgacctcaaacgctgg
aaagctaaagttcaacacctggtcagccaacaaaaagagggagacgccgaggaaaaacag
aaaatcacagctgaaaaagaggcacaacagaaacgcatagcgcagctaattgaagaggcg
gctaagcttaggactgagctggccagatccaacgccagcagcaattcagctcaagcccag
cttcaaggtctcaaagactctgtggtccgcttgacatcggaaaaagactcttttaagaaa
gacctggaaactaaaaacaatgaaattctggagaagaacaggaccatcactcaggtgaag
aagattggacgccgctacaagactcagtacgaggagctgaaagcccagaatgataagacg
gctggggaaacgtctggaaagaacgacctgaagaagacccaagatgaactacatactctg
aaggaggaagctcagaaaaggcaggcggaggctcagaagtctcagcaggacttggaggcg
gctcagaaggaacatcagcagagcaaagaaaaactccaggagctccaaacccagctcaca
cagagccagaacgagctgacacaggcccagtcccagctgagtcaggcccagacccagttg
cagcagaatcagagccagctggccctgaagcagaaagtattcgaccaattcaagaaccag
ctccagcagtcacagatcaagctaaaatcggtccagtctctggcccaggcccggcagaac
cagatgcagcagatgcaggaggagcttcagcaggctaaagaggccgtccagcagaacgct
gctaaagagaaggagctccagcagaaccacagtcaggaggtcagcaacctgaagacctct
ctcagtcgagccgaaaacaaggtggcagagcttcaaatccaacggaacaacctgcagaag
accgtttctgagcgtgaagcagagattatgaaactgcaggagcagctaattgaagttaag
cgtgctcatgaagctagccaagcagcactgaccagccagagttcccagtctatccaggcc
aatgactccacagctgctggagatttcagtcagacacagcatgatgagctgaccaagctc
aaacaggagctttctgagagtaagaacagagaagatcagctcaaactgcagatggctgag
aaagaggagaagaccaaaaaggccattctgggagccaaattaaaaatcggccaagtaaac
agtgccaaagagcagctcagtcaggagaacgaggagctgaagcagagcaaagaggagctg
gaggtcaggatgaacgccctcaagtctcagtacgaaggaagacttcttcgaatggacaga
gagctgagagaactgagagagacacaagctcactctgacgggagggaggaaactcaggac
cagggtgtagccaagttggatcagcccagatcttcagaccagagacaaatttctttgaaa
agtcctgctcaagacaggggaagcctgagcacctctgagccacccaccgccaacattcgg
cccactccaagcactcagtcacccagcaacaagccgagtccgtccaccggcagcaaggcc
acccctcgcgccagcatcaggcccatggttacacctgcacctgtccccaaccaaacaccc
acagccacagtgatgcccactacacagacggagagtcaggaggttctcatctctacagga
gcttctgttcactccaccagctcttccctcatgaatcctctgacctccttaactcagcca
accagcactcaggccacggcctttgttcagcccacccagcagcaggcagccaatcaggac
gcaggctccagcatagaggcagattgtccatccacatcctcctcctgcatgccttcaaca
gctaaaactggctcaaagcgaagcagagaaaccgaagaggaggaagaggaaagtcgacct
gagagttcccaaacacctccgaacactaaaaaactacgactgaaaccaacaatcgctctg
cagatggagggtgatgaagagctggaaggagagctgggggacatgggagagcaacaggtt
tcacctgatgacagtcgggagctcccagaggaaggcttccaggtgttttctgaggaggac
gaaggagtttcccagtccgtcccgtctgaccagggctcccagggctcggctttaattcga
gacgtcattgtgatcgacaccgacagcgagagcagggagagcaaagagggggaccagaga
gtggaagaagaggatgaagacgaagaagaggatgaagaggaagcagaaggagagcaggaa
gaagatgacgaagaagatgatgatggagctgctgacagcgggatgagaggaggagaggag
cacaacgaggagagtcaggaggctgaagatgagagagaggaagccgctccttcagggggt
tccaacgctgaggagaatgtgagtggcgcccccaccagctcccagcgcccttctgacccc
tcacagagcggagaaggcaccagttgcggagcagatctaggatctgctagggattacctc
caccacccgccaacctgctccactgcacactccccctgctcctcctccctgatgccccgc
ctctcccagccgcgcaggccgtcaccccggctcttcatccaagctccggcacctgaactg
ggacccccacacacacagagacagccgtctcaacttcgtagaccatcatcgggtcgtgga
cctcaactaactcctggattagcctccatgccgttctttgatgacgatgacagaatggtt
cccagtactcccactctggtggtcccgcaccgcaccgatggttttgccgaggctatacat
tctccacaggtagcaggcctctccaccagattcaggttcgggcctccagaagatttgctg
cagcaggcatcagcttcacattcggacctgggacagctggcgtctcaaggaggcttgggg
atgtatgaatctcctctcttcctggctgctcatgatgaagatggcggagggaggagtgtc
cctaccacacctttacaggtggctgcaccagtgacggtctttacagagaatatgccctct
gacagtggcgacaacttggcctcccagtcagttcccatggtaactgcctcaactgggatg
gctgctgctgcagacgatggagatgaggttttcatggagcacgaaggagaaggtccagat
attgacgtttctctggacagccagatgctcctggagtcaacaggacagcaacgtgatgat
gcctccctgccgtctacaagtcaagatcctgacaccagcagtgacagtcagcctcgctca
gtaacaagccagcgtcagacgagcatcctctcaggcagaggacggttcctcagtcgcaca
ggagcatttcctcgagcaggaagaggcggagccacatga
DBGET
integrated database retrieval system
