Xiphophorus couchianus (Monterrey platyfish): 114146123
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Entry
114146123 CDS
T05908
Name
(RefSeq) inner ear-specific collagen-like
KO
K24214
otolin-1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114146123
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
C1q domain-containing proteins
Adiponectin / short collagen group proteins
114146123
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GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
114146123
NCBI-ProteinID:
XP_027875731
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Position
6:complement(13818491..13825762)
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AA seq
493 aa
AA seq
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MPSADLILVTTVFMAFIITLTSGGRTTRWPKPQNTNKPPQTGTSGFGGGLRSGQIATKNP
SPSSSLHTEETTGFMTDGYSLSPTDSSIFNSEAYPTEYLTDAILPPGNAPGNYTFDYNEC
FFNVCECCPPEKGPEGPTGEKGSPGERGPPGLPGEKGEIGPPGSPGPAGLPGLSGLNGEK
GGKGDQGPNGLPGSPGVPGKPGEKGDLGFKGEKGENGINGLKGDAGEKGEPGHNGTMGTI
GPMGPPGTAGTKGQKGEQGRLGECLLGERGQKGDLGDPGPPGPKGEMGPQGANGSDGSKG
EMGPAGEKGETGARGPPGARGVAGMKGERGVKGVRGPRGPKGDPGESLEPVRSAFSVGLF
PSRSFPPPGLPVKFDKVYYNEEGHWDPALNKFNVTHSGVYLLTYHITVRNRPLRVALVVN
GVRKVRTRDSLYGQDIDQASNLVLMQLSEGDQVWLETLRDWNGIYSSSEDDSTFSGFLIY
PNSTTKTSAMKKI
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgctgatctcatcctggtgaccaccgtctttatggccttcattattacgctc
acgtctggtggcaggaccacacgttggcccaaacctcagaacaccaacaagcctcctcaa
actgggaccagtggtttcggtgggggattaaggtctggacagattgctacaaaaaaccca
tctccctccagcagcctgcacacagaagaaacaactgggtttatgacggatggatactcc
ctgtccccaacagacagcagcatcttcaacagtgaggcttacccaactgagtacctcact
gatgcaatcctcccccctggaaatgcccctggaaattatacatttgactacaatgaatgc
ttcttcaatgtttgtgagtgctgtccaccagagaaaggtcccgaaggtccgactggcgaa
aaggggtcaccgggggaaaggggccctccagggttaccaggagaaaagggagaaattgga
cccccgggttctccgggacccgctgggttacctgggctcagtggattaaacggagagaaa
ggtggaaaaggagatcaagggccaaacggtttaccgggctcccctggagtcccagggaaa
cctggagaaaaaggtgatttgggcttcaaaggagagaaaggtgaaaatgggatcaatggg
ctgaaaggagacgcaggagaaaaaggagagcctggtcacaatggaactatgggcaccatt
ggacctatgggtcctccagggacagctgggacaaagggtcagaaaggtgaacagggacgt
ttgggagaatgtctgcttggtgagagaggacagaaaggtgatcttggtgatcctgggcct
cctggtccaaagggtgagatgggtcctcaaggagcaaatggcagtgatggttcaaaaggc
gaaatggggccagcaggagagaagggagagactggcgcaagagggcctccaggtgcaagg
ggagtagcaggaatgaagggagagaggggagttaaaggtgtacggggccctcggggccca
aaaggcgatccaggtgagagtttggagccggttcgttctgctttcagtgtgggtttgttc
ccaagtcggtcctttcctccacccggactgcctgtgaagtttgataaggtctattacaat
gaggagggtcactgggacccggcactcaacaagttcaacgtcacacactcgggagtctac
ttactcacttatcacatcactgtgcgcaaccggcccctgcgggttgccttggtggttaat
ggggtgcggaaagtgaggacacgagattccctttacggccaggacatcgaccaggcttcc
aaccttgtcctgatgcagctcagcgagggagatcaggtgtggctggagaccctgagagac
tggaacgggatttactccagcagcgaggacgatagcaccttctctggcttcctgatttac
ccaaactcaactacaaaaacaagcgctatgaaaaagatttaa
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