Xiphophorus couchianus (Monterrey platyfish): 114146198
Help
Entry
114146198 CDS
T05908
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114146198 (chd7)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114146198 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
Chromo_MIT1
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
114146198
NCBI-ProteinID:
XP_027875868
LinkDB
All DBs
Position
6:10212994..10301650
Genome browser
AA seq
3275 aa
AA seq
DB search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NT seq
9828 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccagggatgttgagcctctttggtgacgatgcagggttgttctcagacgaa
ttggatagtttgggagactgcttcccccagcagtcagcggctggcccagccaacccactc
gccccacccacaaacccatctctgaaccacgagcaccagggaaccagggcttaccaccaa
gggatgcttcacggcactgggaccggaccggggcagtccaaactggggcagatgtatgag
cacagcccgtatacaggctacgatcaagcgggtgcccccggaggacggatgatggcccag
aacggtcccagccagggctcgccgactgtgaacacggccatgaacggcatgacctcccac
taccacaacaccccagctaactctagcaacactcaccacgggtaccagggtgatgctggg
gcagcaggaggaggcgggggcggagtttggggcccacagcagcagagcagatctgtgtat
cagcaggcttcagcaccatcaggggctggtcccaaccagatgggaagctaccaaatgtct
caaggcaactacgctggcatgcaaggtcctcctacatccggtgcagcgcgcatgaatcaa
cactacccttcacagagcatggcccccgttccagctcaggacccatctcactacttagga
catgttgggatggggggggtccagatgagacagcctcagccgcagccccagaactatccc
aacatgggccacgcacctcgatacccacactccccttctagacaacctccacaccagcac
caacagggcatgccgccattcgggggtgctcagtaccctggctatcagccccaatatgct
gccatggggcctgggatgggccagggggctaatgctaacgtcagcgctaacgccagccag
gccatgggaccagggcagctgggccagaggttcaaccagggagtgagctcagcaccgggg
caacagggacaacgatacccctctgttccaccccaccaaccccactctgcctcaatgcag
cagcaggcagggcagcaaggccagcctatgcatcccctaaaccaccccccgaatcttccc
caacctccaaaccaatcccaatcccaccttaccgccccagctcagggatcttacccctcc
ccgtcgtctatgtccccaatgcgggttctgggaaccccaactcctcctccccagcaagga
agaccccccagcgcaggactagccgggcctccggatgtcgcaggatacacagcaatgcat
tctccgcccagcgctatggcccatgcacagagaactccccagacctccctatctgcagca
cacccacaacaccagcatccccacaacatgcctcccagtgcagggcaaatttatcctggc
atggggcctcagcgtggaccacaaatcgggccgactcggctccagcaaccacaagggcct
cacgaagcctcagtcagccagggggtggaccagcgtctgctccaggcccagcagcaggcc
tctcgaggtgggcagcccatgccgtctgctcctatggggttccagggtccgcctattggt
caacacggagcccctgcccctaaccagggcttagctccacctgcccagaacactcagacg
cagcacacgcatctgcccccacacccccaccacctgcaaagcacgccccctcctcccagc
caggcctcccacccatgggcacctcagccatctgccccccacccactctcctcaccccct
cttaccccacagaaagtgcctcacatacagcattccccctcagacctgtcaggtgatgcc
tcaatgatggttaccgacaggccgacggttggtgccggagcccccagccagcctatcagc
acagagaagcctactgatcaggagaccaagccaaaaaagaagaagaaaaagaaagctaaa
gcggtggaagaaaaagaagatggaggcaagaaacaagcgagagaaggaggagatgaagac
gtaaagtctgagtttcctgcagcaggaagcaatgcaagtgaacagcttattggcacagga
gctgttgaagggagtttgcccccaccggaggagaagaagaagcggaaaaagaaaccaaag
gagaagacggagggcaaggagcccaaagagcccaagaccccgaagacccccaaaacacct
aagactcccaaagagcccaaggagcccaaggagaagaaagccaagagcaccacacccaag
gccaagactcccaagaaaaccagcagtaaaaaggtggactcagagggcggggccagcgct
gctaagaaggacgccaagaggaagagagagctgtcagtcggtgacgatgtggaggtgaag
tctccactgccctctcctcctgaagaggaggatgatgatggtgtgcagaagcgccgttcg
agtcggcaggtgaagaggaagaggtacacagaggacctggagttcaggatctctgaggac
gatgacagcggagacgattcaccaacaccaaaatctccctcatcctcctcacaacaacag
gatctgactgaggctgaagggcctgttgtggagaagatcatgggtatgcgcagcgccaag
aagcaactggagtcgggcgaggaagtggaggtggaggagttctacgtcaagttcaagggc
ttttcatacctgcactgtcgctggtcggaactggaggagctggagaaggacaagagaatc
caccagaagataaagaggtttaaagccaagcagctacttaacaacttcatcactgagatg
gatgatgagccttttaacccggactatgtggaggtggaccgagtcctggatgtttcagag
agcacagatgaaaatggagagattgtcaccttatatttggtgaaatggtgcagtttgcct
tatgaagacgccacctgggagctaaagacggacatcgaccaatctaagatagatgaatac
gaacgcatcgcagcgcgcgaacccaacactaaccgagtggatcggccttctgcagccgac
tggaaaaagctggagagctccagagaatacaggaatggcaatgcactcagggaataccag
ctcgaaggcctcaactggctgactttcaactggtacaacttacgtaactgtatcctggca
gacgagatggggctcgggaagaccatccagtccattacattcctctatgagatatacata
aagagcattgaggggccattcctgatcatcgctcctctctccaccatccctaactgggag
agagagttcaggacctggacggagctcaatgtggtggtctaccatggcagccaggccagc
cggaaaaccatccaggcctatgagatgtactacagagacgcacagggtaagataataaaa
ggtgtgtatcggttccatgctgtcatcacaacatttgagatgatccttgccgactgtccg
gagctgcgcagcatcccatggcgctgcgtggtgatcgacgaagcccaccgcctcaaaaac
cgaaactgcaagctgctggaggggctcaaaatgatggatatggagcacaaagtcctgttg
acaggaactcctcttcagaacacagtggaggagctcttcagcttactcaacttcctggaa
ccagagagattcccgtctgaacagactttcatgactgaatttggagacttgaagactgaa
gaacaggtccaaaaacttcaaggtattttgaagcccatgatgcttagaagactgaaggag
gatgtggagaagaacctggcccccaaagaagaaaccattatagaggtggagttgaccaac
atccagaagaaatactatcgggccattctggagaaaaacttctccttcctgtccaaagga
ggcgcaggaggaagtggatcagctagtgtgcccaacctcctcaacaccatgatggagctg
aggaaatgctgcaaccacccctacctcataaatggagcggaggagaagatcatcgaggag
ttcagggattcccacggcggcaggattgatgtgcctgaaatggccctccaagctatgatc
caggcagctgggaagctagtgctcatcgacaagctgctgcccaaactaaaagccggagga
cacagggtgttgattttcagtcagatggtccgctgcctggacattctggaggactacctc
atccagagacgctatccatatgaacggatagacggccgcgttcgggggaacctgcgacag
gcggccatcgacaggttttccagaccagattcggaccgatttgtcttccttctctgtacc
agagccggtgggcttggcatcaacttaaccgcagcggatacatgcatcatcttcgactct
gactggaaccctcagaatgaccttcaggctcaggcgagatgtcatcgtatcggccagtcc
aagtcggtgaagatctaccgcctgatcaccaggaacagctacgagcgggagatgtttgac
aaggccagtctgaagctcgggctcgacaaggccgtcctccagagcatgagtggccgagag
aacgccaacagcggggttcagcagttgtctaagaaagagattgaagacctactgagaaaa
ggtgcctatggcgctttgatggacgaagaagacgaaggctcgaaattctgcgaggaagac
atcgaccagatcctccagagacgaacccacaccatcactatcgagtcggaggggaaaggc
tccacgtttgctaaggccagttttgttgcaacaggaaaccgaacagacatttctctggag
gatccagacttctggcagaaatgggccaagaaagcagagctggacatggacgccatcaac
ggccggaacactctggtgatcgacacgcccagggtgaggaagcagacgcggcactacagc
agcgtgaaagaggacgaaatgctcgagttctctgagctggagagcgacgacgacgagcct
agcaagccgtcttccaaacaacgacggcctcaagacaaaacccagggatatccccggtcc
gagtgcttcagggtggagaagaacctgctcgtctacggttggggtaggtggagtgacatc
ctcgctcacggccgcttcaagcgtcccctgaaggaggcggacgtggagacgatctgcagg
gctctcctggcctactgtctgctgcattaccgtggcgacgagaacatcaagagcttcatc
tgggacctgatcactccaagtgaagatggcaccaccaggacgctgacgaatcactctggt
ctctctacccccgttcccaggggcaggaaggggaagaagggcaagatgactactcctcct
cctcagacgccacgagctgattggctggccacctgcaaccctgaccatttactgcaggag
gacagctacaagaggcacttgaaacatcactgtaacaaggttctgctgagagtccggatg
ttgtattatctgcgacaggaagtcatcggtgaccaagctgagcgcattctggaaggagcc
gactccagcgtgttggatatctggatccctcagccgttccacgctgaggtcccagctgac
tggtgggacacggaggctgacaagtccctgctcatcggcgtcttcaaacatggctatgag
aagtacaactccatgcgtgccgaccctgccctgtgcttcttggagcgagtgggcatgcca
gacgccaaagcgatcgccgctgaacagaggggctctgacatgatggcagatggcattgag
ggtgaggatgaggatccagagtataaaccgatacgtatgccatttaaagacgacctggac
gatttcaccaactctcccctggatgacaaagatgatgcagttgaaggcgagactgaagtt
aaatcaggtgagaatggccaaaacgtgccgtctgtgggcggagcttctggctccagcgag
cgactgtattggccagcagcctcggccctgacggccaggcttcgccgtctgatcacggcc
taccagcgctccaaccgcagagagcagctccgtcaggaggcactcaacagacccgacggt
cgccgacgacgacgcagggagttcctgccttccatccccatggttcctgaaacggggggc
gctaccacatacatccaggatggcacgggggtgttcatgacagacggaagcccatatttg
gctaaaggaagagcttattttgccaaaggtggtcagtttctgccagaggcttcgccagtg
atgacggccaactccctgatgtctgatggatccctgtattatagagagaggagacaaagg
tggacgcgtcgtgaggaggcagacttctaccgcgttgtgtccacctttggagtcgtgttt
gatacgcagcgtcaaaagtttgattggacccagttcagagcgtttgcccggctggacaaa
aaaacagatgagagtttggagaaatattactactcattcattgccatgtgcaaacgggta
tgcaggatgcaggtcaagaccgagacagaactcccagacccgaccctgatcatcgaccca
atcaccgaggagcgcgcctctcgcaccctataccgcatcgagctgctgcgccgcatccga
gagcaggtcctccctcacccgctgctgtctgagcgcctcaagttctgccagccgtctccc
gacctgcccgagtggtgggagtgcgggcgccacgaccgtgacctcctcctgggggcctcg
aagcacggcgtcagccgtacggattatcacatcctcaacgaccccaccttgggcttcctg
gaggcccaccagcgcttcaccagtcagcgaggcgccgtcggcatcggctctcttggagaa
ctcggcaaagtcgggatggggatcgcagaagcggcctctgcgccacttctcacgactgca
gagctggagagtgccgcagccgctgccgaaatggccgtggacgcagctgaagaggaggaa
gaagggaaggctgtaaaaatggaagaagagaaaacagaagtggaagtaaaaatggaaaca
gaggaggaagattccagcaacattccatgtatgaagactgaaccccttgagcaaaagaga
aaccaggacaatgctgatgaagggaaagaagaggcagctgcttcactcatgaaggtcaca
gctgaagacgttttgccagaggttgagaaagacgatgatgaagcgaaaccagaaagccag
acgacaaataaccaagatcacgacatgacagaagaaaagatcagcacaagccctgaatat
tacctaagcaatgagatagacgttggcgctgagctcccagaatcctctgctgaagcacaa
cttggccccaagactgcagaggaggaagatggcgaggagaaggagacttctgaatgtctt
aaatctccaaagtctgctgaaaccgagaaaagccctgaggaagaggaggaggaggagagg
ctggatgaagatgacaaatcggagaagtcctctcaggctgaagcgagcgcagggcagaag
aacttcgacgaggagagcatcgcttctctgagcacatccgtacgggacgagacccgagac
gagttctgtcccgacgacctgcaggaaacgtctgtgctgcacaccctgcaggaccgtgcc
tacgccttctctttctggcctaaggaccgcgtgatgatcaacaggctggataacatctgc
gaggctgtcctgaagggcaagtggcccgtcaacagacggcacgtcttcgacttccctggc
aacctcttgcccggtcacggctccgcggcaaccgcagccgccgtagccatggtgagcgag
agcccgctgcagagacggagccttgccgagctgacgatggccggcatccacacgccgtac
agcgggagcgaagacaaaacgctgtctccgcaggttcatgacgacgctctgagcctgacg
gtgcctcgacagaggaggaggagaaggaaaaagattgagatcgaggcagagagagcggcg
aagaggcggaacctgatggagatggttgctcagctaagggaaagccacgccgccgcagag
tctcagaaccaggccattgacctcactaagggcgtgcaccaccactacaaagcttctccg
tcattggccggcttccccagtgccttgatgacgaacccttccctcaaggcccagatggat
ttgcttcagcaagtcccgccttccggacacagagccaacggttcgttggacgccgacctg
cccatcacgaagaggaggcggggccgcaggaaaaatgtggagggcctggagctgctgttc
atgggcaacaagagagcagccggggatgattccgatgggacaaagatttcaggagtggag
gcggtccaggaagcgccccagccccacagaccgatcagcgtcccagagcagagccccaac
gcccgctctctggcctcaggcagcctggaggaggaggagacgcccgtctccagcaaagac
ctgggagagtggctgagacagcatcccacatacaccatggacatgactggattcacacca
aagagcgaggagttgctgttatctcagttctccaagcccaagcagaagcgccatcgctgt
cgaaaccccaacaagatcgacataaacacgctgaccggagacgagagagtccctgtggtc
aacagacggaatggacgcaagatgggtggggccatggctccaccaatgaaggagctcccc
aggtggttattggagaaccccgagttctccatcgctcctgattggacagacatcgtcaaa
cagtcgggtttcctcccggaagccatgtttgaccgccttttgaccggccctgttgtcaga
gaggaaggcgttcgtcgtcgagggcggcgacccaaatcggaaatagtgaaggcggccgcc
gccgctcaggccgcggcggcagcgcaggctgcacaggcgtcgctggcgtcagccgcttcc
tctgcagggggaatcaacccgctgctgctcagcagcctgttcggagggatggacctgtcg
tctctccagagccttcagtcgctccagttggctgctggtctgatggccttcccgccacct
gctgaccccaaacagtccaccgccaacgccgccgccgcctccatgctgcccctcatgatc
cccagcatgggagggcttcccaatatggccgccgccattcccaacatgttcagccttgga
ggaatatttggaggtaacctggctgccaccgctgcttccggaaacaccaacgggacgctg
gagggagacggaggcaacggggaggagacggcaaagagggagaaggaggcgagagaagac
ggagacgagatgggagaggaagatgatgaagaagaggagacggcggagggagaggaggag
ggcgtgaaaaagaccaagaagaggaagatggaggaagaggttgaaaaaaaggagaaacct
gtcggcgatgcgtccggtgctcccaagatggcggccgccgaggctccagcagaggtttcc
atcaatggggacacagccgccctcctggccgccgccggtatgtcggccaactccctggcg
ttcaaccctttcctgctgtccactatggcgcccagcctcctctacccctccatgttcctc
ccgccgggcctggccggcctcagcctgcccggcttccccaccgcctccctcgccgagctg
cagagcgccatggccggggcgctgggcgacagcgcctccaccccgaacccgccgagagac
gccgagggggagaagagggacgacgggaaggctgtggacgacgaggaggaagaggaagag
gaggagggagaggagacggactcggcggagcagaaagaggaaggagtgacgggcggagga
atgccggaggagtcggcggcgtctccccagaacggaacgagtgactga
DBGET
integrated database retrieval system
