Xiphophorus couchianus (Monterrey platyfish): 114146216
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Entry
114146216 CDS
T05908
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04145
Phagosome
xco04814
Motor proteins
xco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114146216
09142 Cell motility
04814 Motor proteins
114146216
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114146216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114146216
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114146216
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
114146216
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
114146216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Nbas_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
114146216
NCBI-ProteinID:
XP_027875891
LinkDB
All DBs
Position
6:10845300..10854780
Genome browser
AA seq
648 aa
AA seq
DB search
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDVESKRSAEGGPAGAEDSDLERKRR
EAEALLQSVGITPDVPHAQPLRIVTEDTCLFHYLVPAPMSPSNKSVGSDAGSQDSGDGNA
GPRTLHWDPDPSTLQLHSDSELMGRGTVRLGMSKLIQVDFVPKEMVSYCKETQTPTEALA
HTDQKADEEEDEEISAPPLTDDTQDEKNEQSEQQEEDTPKELTEEEKLQVLHSDEFLSFF
ERGSRIVERALAEQVDVCFDYSGRDLEDKEGDLQAGAKLVQNRQFADERWTKNRVVTCLD
WSPQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKATPEYIFHCQSEVMSAGFAKFHPN
LVVGGTYSGQIVLWDNRSNKRTPVQRTPLSASAHTHPVYCVNVVGTQNAHNLISISTDGK
MCSWSLDMLSQPQDSLELVFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACRHGSKA
GITEVFEGHHGPVTGLSCHSAAGPVDFSHLFISSSFDWTVKLWSTKSTRPLYSFEDSSDY
VYDSMWSPAHPALFACVDLSGRLDLWNLNNDTEVPTASVCVEGSSALNRVRWSHSGKEIA
TGDSDGQVQVYDVGEQICVPKADEWTRFVRTLAEINENRDEAEELANV
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagcgagctgaaggctgagctggagaggaagaagcaacggatcgcccag
atccgcgaggaaaagaagaggaaagaagaggagaaaaaaaagaaggatgtagaatccaaa
cgtagcgcggagggagggccggctggcgccgaagactcggatctggagaggaagaggaga
gaagccgaggctcttctccagagcgttggcatcacccccgacgtcccgcatgctcagccc
ctgaggatagtaacagaagatacgtgtctgtttcactacctagtccccgcccccatgtct
ccctccaacaaatcagtgggcagcgatgctggaagccaagattctggggatggaaacgca
ggaccaaggactttgcattgggatcctgacccctccactctgcaactccactccgactct
gagctgatgggacgtggaacggtaagacttgggatgtccaaactcatccaggtggatttt
gtcccgaaggaaatggtgtcctactgtaaggagacgcagacacccacagaggcgttggct
cacacggatcagaaagcggatgaagaagaggatgaggagataagtgctcccccgctgaca
gacgatacccaggatgagaaaaacgagcagagtgaacagcaggaggaagacactcccaag
gagctgacagaggaagagaagctgcaggtccttcattctgacgagttcttgtcgtttttc
gagcgtggcagcagaatcgtggagcgcgctctggccgagcaggtggacgtctgcttcgac
tacagcgggagggatctggaggataaggaaggcgacttgcaggcaggagcaaaactggtt
cagaacagacagtttgcagatgagcgctggaccaagaaccgagtggtgacctgcctcgac
tggtctcctcagtacccagagttgctggttgcctcgtataacaacaacgaggacgctcca
catgagccagatggcgtggctctagtctggaacatgaagtacaagaaggccacccctgag
tacatcttccactgccagtctgaggtgatgtcggctggcttcgcaaagtttcaccctaac
ctggtggtgggcgggacttattccggacagatagtcctgtgggacaacaggagcaacaaa
cgcacgcctgttcaaagaactcccctgtccgcgtcggcgcacacgcacccggtctactgc
gtgaacgtcgtcggaacccagaacgctcacaacctgatcagcatttccactgacggcaag
atgtgctcctggagtctggacatgctctcccagccgcaggacagcctggagctggtgttc
aaacagagcaaggcggtggccgtgacatccatggcgtttcctctgggggatgtaaataac
tttgtggtgggcagcgaggatggctcggtctacaccgcctgtcgtcacggcagtaaggcg
ggcattacagaggtgtttgaaggccaccatggtcctgtgactggactgagctgccacagt
gctgcaggacctgttgatttctctcacctcttcatctcctcctcttttgactggaccgtc
aaactgtggagcacgaagagcacccgtcctttgtattcattcgaggacagctccgactat
gtttatgactcgatgtggtctccagcgcatcctgctctgttcgcctgtgtggacctgtcc
ggacggctggatctgtggaacctcaacaacgacaccgaagttccaactgcgagtgtgtgt
gtggaaggatcttcagccctgaaccgtgtgagatggtctcactctggaaaggagatcgcc
actggagactcagacggacaggtgcaggtgtacgacgtaggggagcaaatctgcgttccc
aaagccgacgagtggacgcgtttcgtcaggactctggctgagatcaatgaaaacagagac
gaagctgaggaactggctaacgtctga
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integrated database retrieval system
