Xiphophorus couchianus (Monterrey platyfish): 114146217
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Entry
114146217 CDS
T05908
Name
(RefSeq) transcriptional activator Myb-like isoform X1
KO
K09420
transcriptional activator Myb
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114146217
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
114146217
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Cmyb_C
Myb_DNA-bind_7
SANT_DAMP1_like
SLIDE
Myb_DNA-binding_7
MCM_C
Motif
Other DBs
NCBI-GeneID:
114146217
NCBI-ProteinID:
XP_027875896
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Position
6:30727327..30732827
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AA seq
562 aa
AA seq
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MSSWSHRTSSKSRSRRVKRFSKVSLQKPGWTKEEDELLRRLVKERGASSWSSVALSFRGH
RSEVQCQRRWQQIKNPELVKGPWTQEEDRRVMELVQKYGVKRWSLIAKHLHTRNGKQCRE
RWHNHLNPAVKKSSWTAEEDRVVCQAHRLLGNRWADISKLLPGRTDNSIKNHWNSTLKRK
VEKEGYLHFLQLHGSSSAPRPGTRNHTSRRAQTKADSLSTIKDESSFSSNQSSCRPHGSS
AHLCSTWAPASCSGCKQGASTELMEMQKSCSSQNLEAWSYQEMTSHPSPEAALLREDSPS
VIDLSRSYVPGVKEQLMKTDEGASFMDSSSSWERSSMMEAAVFSPAEVFSLSAAEELSFQ
RPPLTSTPLCSLKHQNVCCVHCSLGSRTEQIRALFPSAPETPTPLKVPDCQDEVAACSRL
MMNLTGGERSSDPDSQQSSCSSEVHGESLLSSILQSPNGTGSASQVQVGSGSGQQKVQGP
SGSAVPSQARFVPTCDEFECFPLDEQLEVWWAQQHAPNQGSPECPANRTNPFEVSGELQV
VMFGRTEDQASLTQQARHYVAP
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctggagccacagaaccagttccaagagtcggtccagacgggtcaaaaggttc
tccaaagtgtctctccagaagcctggatggaccaaagaggaggatgagctcctgcggcgc
ctggtgaaggagcgtggagccagcagctggtcctcggtggcgctgtccttcaggggtcat
aggtcagaggtgcagtgtcagagacgctggcagcagatcaagaacccagagctggtcaaa
ggcccatggacccaggaggaggaccggcgggtcatggagctggtccagaagtacggcgtg
aagcgctggtcgctcatcgccaaacatctgcacactcgcaacgggaagcagtgtcgagag
cgctggcacaaccacctgaacccggcggtgaagaagagcagctggacggccgaggaggac
cgggtggtgtgccaggcccacaggttgctaggcaaccgctgggctgacatctccaagctg
ctacctggcagaacagacaactccataaagaatcactggaactccaccttgaagcggaag
gtggagaaggaaggttacctgcacttcctgcagctgcacggctcaagctccgcccccaga
cctgggactaggaaccacacgtcccgcagagcccagacgaaggccgacagtctgtccacc
atcaaagacgagtccagcttctcctccaatcagagcagctgcagacctcatggaagctcc
gcccacctgtgttccacctgggctcccgcttcctgctcaggctgcaagcagggcgcgtcc
accgagctgatggagatgcagaagtcctgctcgtcccagaacctggaggcttggagctac
caggaaatgacatcacacccatctccagaggcggcgctgctcagagaggactcgccgtcc
gtcatcgacctgagcaggagctacgttccaggtgttaaggagcagctgatgaagacggat
gaaggagcgtccttcatggactcatcctcgtcctgggagaggagcagcatgatggaggcg
gcagtcttctccccagctgaggtcttcagcctgagtgctgcagaggagctgagcttccag
cgcccgccgctcacctccacgccgctctgctccctcaaacaccagaacgtctgctgcgtc
cactgcagcctcggctccaggacggagcagatcagagcgctgttcccctcggctccggag
acgcccacgccgctcaaggtgcccgactgccaggacgaggtggcagcctgctccaggctg
atgatgaacctgacaggaggagagaggagcagtgaccctgacagccagcagtccagctgc
agctctgaggtgcacggggagagcctactgagctccatcctacagagtccgaacgggacc
ggctcggcctcacaggtccaagtcggttccggttcgggccagcagaaggtccagggcccg
tccggttcggcggttccgtctcaggcccgcttcgtcccgacctgcgacgagttcgaatgc
ttcccgctggacgagcagctggaggtgtggtgggcccagcagcacgctcccaaccagggc
tcgcccgagtgtccggccaacagaaccaacccgttcgaggtgagcggcgaactgcaggtg
gtgatgttcgggagaaccgaggaccaggccagtctgacccaacaggcccgccactatgtg
gcgccgtga
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