Xiphophorus couchianus (Monterrey platyfish): 114146240
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Entry
114146240 CDS
T05908
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
114146240 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114146240 (depdc5)
Membrane trafficking [BR:
xco04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
114146240 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
114146240
NCBI-ProteinID:
XP_027875942
LinkDB
All DBs
Position
6:complement(1685702..1727955)
Genome browser
AA seq
1584 aa
AA seq
DB search
MKTNKSYKLVLHKKGFGGSDDELVVNPKIFPQVNLGDIIEIAHPTDDYSPLLLQVKSLKE
DLQKETISVDQSVAQAFKLRAYQDVIVNIVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISENTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVSGFLSDLFTKWKEKNCSHEVTVVLFSRTFYNAKTLEEFPENLRG
SVRQNHEGHYYEDFYRVVAQNERRDEWTSLLVTIKKLFIQYPFLVRLKETAGFPVGYNST
AVQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNKHTPGDSRVGDDYNLPHWINHSFYTSKSQNSCSSFT
PRIKLADRKPHAEIQKSNKDHSLCSPKDSDNSLPIQVDYDAYDAQVFRLPGPSRIQRSSN
FKIGRDKEMSGRKSWGSVDISTGIGTSSPVRSGGTEEQTSLASDDSLGPVSNMLLIPRGP
PAQYEVSSSLGYTSTRELLEKMMDSQRDSSAPGRFTVGSAESTLHIRPGGYTPQRALINP
FTPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSQQKDPTHTSAELLE
LAYHEATGRRTTSRQAGENGLYICGGTEEFTGSPGSNNSCGPLSNRSASFQDFSSGADPT
LLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQTLQNDYTEGCYDLLPHSDLE
RREDEAPVMTASQVFEEFICQRLMQGYQIIVQTNNRKPPPAVATPLGSSPLYTRGLVSLR
RAEEEETVYWLSMGRTFHKVCLRDKIITVTRYLPKYPYESAQIQYSYSLCPPHSDAQFVP
CWVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVADGEGH
WDVYGEGAGTGMGGCGDWVLLDGFIRFVEGLNRIRRRHRSDRIIRQKGTPMKGLQVTSPI
PPYPPEPVAPPQGKRGTSALTALLEMEQNQKTLEEQQQQSKATPAVSDLSSIAMAPTYVD
SPRKDAAFILDFIRSPRSSYIYHSQLPVETSEPAEKGAQAGAAAGAATPAGEAANSSTDS
SGQSAAGALCLSSSSTLMEILEAIKHPTTGVQLLPEQKGLPLNCFISAEVVHWLVNNVEG
VATQGMAVDIMQKMLDEGVVAHASGDAMRTFIYGFYFYRIVGEKEGLNSQLQAAGGWSTA
AVEDFALFQRKWFEVAFVLEERRPCDLPAFLLPWLPSRPASYASRHSSFSRSFGGRSQAA
ALLAATVPEQKTVTLDVDINNRSDRTEWCSCYYHGNFSLNAAFEIKLHWMAVTAAVLFEM
VQGWHRKAASCGFLLVPVLEFPFALTSYLYGDPLRVQLFIPLHIQCLLKNGSDNLFEGFE
PETYWDRMQLFQEAILYRFGFVHDKFSPSSFNFPAENKPQYIHVTGTVFLQLPYSKRKYS
GGQTRRRRNSTTSNSQAPFGGEERVGYYWAYNTMLTKAWRTGVLGDERLADRLLRDLTDF
CSNKDNRLQILWDSCQEKMNASAP
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaataagtcttataaactcgtactgcacaagaaaggttttggcggaagtgat
gatgagctggttgtcaacccaaaaatcttccctcaagtcaacctgggagacataattgag
attgctcaccctacagatgactacagtcctcttctgcttcaggtgaaaagcttaaaagag
gatcttcagaaagagaccatcagtgtggaccagagcgtagcacaggctttcaagcttcgt
gcctatcaggatgttattgttaatatagttgaccctaaggatgtaacactcgatctggtg
gaactgacgttcaaagatcagtacattggccgaggagacatgtggaggctaaagaagagt
ctggtgagcacttgtgcttatgtgactcagaaagtggagttcgcaggaatcagagcccag
gccagtgaattatgggtgaaaggagaaaaagtgacctgtggctacattagcgagaatacc
agagtggtttttagatcaacgtctgctatggtttacatcttcatccagatgagctgtgag
atgtgggattttgacatatatggggatctgtactttgagaaggcggtcagtggtttcctg
tctgacctgttcactaaatggaaggagaagaactgtagtcatgaagtgaccgttgtactg
ttttcacgcacattttacaacgccaaaactttggaggagtttcctgagaatctaagagga
tccgtcagacagaatcatgagggacattattatgaagacttctacagggttgtggctcag
aatgagagacgggatgagtggacgtcactactggtcaccatcaagaaactcttcattcag
tacccttttctggttcgacttaaagaaacagctggttttcctgttggttataattccact
gccgtgcagggaaactacctggaggccattaatctttcttttaatgtgtttgacaagcac
tacatcaaccgtaactttgaccgcactggccagatgtccgtggtcatcactccgggagta
ggagtgtttgaagttgaccgtctgcttatgatactgactaaacagcgaatgattgataat
ggtatcggtgtagacttggtgtgtatgggtgagcagccactgcacgctgttccgttgttt
aagctgcacaacaaacacacacctggggactcacgtgtaggagacgactacaaccttccc
cactggatcaaccacagcttctacacctccaaaagccagaattcctgcagctcattcact
cctcggatcaaactggctgatcgcaagcctcatgctgagatccagaagagcaacaaagac
cactctctttgttctccaaaggactcagacaacagcctgcctatacaggtagattacgat
gcctatgatgctcaggtgttccggcttccaggtccatcacgaattcagaggagctccaac
ttcaagattggtcgagacaaagagatgagtgggaggaaaagctggggctctgtggacatc
agcaccggcattgggacgtcttctcctgtccgttcagggggaacagaggagcagacgagc
ctggcctccgatgacagcctgggtcctgtgtccaacatgctgctgatcccccggggtcct
ccagcgcagtatgaagtcagcagctctctgggatacaccagcaccagagagttattggag
aaaatgatggactctcagcgggactccagcgcccctggcaggttcacagtgggcagtgct
gagtccaccctgcatatccgtcctggaggctacactcctcagagagcgctcataaacccc
ttcacaccatccaggatgcccatgaagctgacctccaaccggcgccgctggatgcacact
ttccctgttggtccttctggagaggcaatccagatccatcaccagaccaggcagaacatg
gcagagctacagggcagccagcagaaagatccaactcacacatctgctgagctactggag
ctggcttatcatgaagccacaggacggcgaacaacctccaggcaagcaggcgagaacggc
ctttacatttgtggaggaacggaagagttcactgggagtccagggagcaacaacagctgt
ggacctctgagcaaccgaagcgcctccttccaggacttctccagcggtgctgatccgacc
ctgctgctgtctgcacccccgacagtgcccagcttctgctgcacggtgggggtggactgg
aagtccctgactaccccagcctgcctccccctcaccaccgactacttccctgatcgtcag
acgctgcagaatgactacactgaaggctgctatgacctcttgccacacagtgatctagaa
agacgcgaagatgaagctccagtgatgacggcgtctcaggtgtttgaagagtttatctgt
cagaggttaatgcagggatatcaaataatagttcaaacaaacaacagaaaacctcctcct
gcggtggccacgccccttggcagcagtcctctgtacactagaggtctggtgtctttgcgt
cgagcggaggaagaagagacggtttactggctcagcatgggccgcaccttccataaggtt
tgcctcagagacaagatcatcactgtcactcgctacctgccgaagtatccatatgaatca
gctcagatccagtacagctacagcctgtgtcctccacactcagatgctcagtttgtgccc
tgttgggtggagtttggacatgagcggctggaggaatacaagtggaactacctggaccag
tacatctgctcagctggctctgaggacttcagcctgatcgactcactgaagttctggcgg
acccgctttctgctgctgccagccggaggggctcggcgggtggcggacggggagggccac
tgggacgtgtatggagagggggcgggtactgggatgggtggctgtggggactgggtcctg
ctggacggcttcattcgctttgtggagggcctcaaccgcatacggcgacggcatcgctct
gacaggatcatcaggcagaagggcacacccatgaaaggactgcaggtcaccagtcctatc
ccaccctacccacctgagcctgtggcacctccacaaggaaagaggggcacttcagctctg
acagctttgctggagatggagcagaaccagaagaccctggaggagcaacagcagcagtcc
aaggctacccctgctgtgagcgatctgtctagcatcgccatggctcctacatatgtagac
agtccccgtaaggacgctgcctttattttggattttatacgtagccctcgctcctcctac
atctatcactctcagctgcctgtggaaacctctgagccagcagagaaaggagcccaggca
ggggcggcagctggagcagcgacccctgcaggagaagctgcaaacagcagcacagactcc
agtggccaatcagcagccggggctctctgtctgtcctcctcatcaacgctgatggagatt
ctggaggccatcaaacatcccacgaccggtgtgcagctgctcccagagcagaaaggcctc
ccactcaactgctttataagtgctgaagttgttcattggctggtcaacaacgtggagggc
gtggccacacaaggcatggctgtggacatcatgcagaaaatgctggatgaaggagtggtg
gcccacgcctctggagacgccatgcgcaccttcatctatggcttctacttctacaggata
gttggagaaaaagaaggcctcaattcccagctgcaggctgctggcggctggtccactgca
gccgtggaggattttgcccttttccagagaaagtggtttgaagtggcatttgtgttggag
gagcggcggccctgcgacctgcccgccttcctcttgccctggctgcccagccggcccgcc
tcatacgcaagtaggcacagctccttcagccgcagctttgggggacgcagccaggccgct
gcactgctagctgctaccgtcccagagcagaaaaccgtcacactggacgtggacatcaat
aaccgcagcgaccgaactgaatggtgcagctgctattaccatggcaacttctctcttaat
gctgcctttgaaatcaagctccactggatggctgtcacggctgcagtgctttttgagatg
gttcaaggttggcacaggaaagcagcttcctgtggtttcctgctggttcctgttctggag
ttcccctttgcgctgacatcctatctgtatggagacccactgagggtccagctcttcatc
ccgctccacatccagtgtctgctgaagaacggcagtgacaacctgttcgaagggtttgaa
ccagagacgtactgggacagaatgcagctctttcaggaagccatcctctacaggtttggc
ttcgtacacgacaagttttcaccatcatcttttaatttccctgctgagaacaagcctcag
tacatccatgttacaggcaccgtgttcctgcagctgccgtactccaagaggaagtattct
ggcgggcagacgcggcgccgcaggaactccaccacctccaacagccaggcaccgtttggc
ggcgaggagagggtgggctactactgggcttacaacaccatgctgaccaaagcctggagg
acgggggtgttgggtgatgaacggctggctgaccgcctgctcagggacttgaccgacttc
tgttctaacaaggacaacagactacaaatcctctgggacagctgccaggagaaaatgaat
gccagcgccccctaa
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