Xiphophorus couchianus (Monterrey platyfish): 114146382
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Entry
114146382 CDS
T05908
Name
(RefSeq) macrophage mannose receptor 1-like isoform X1
KO
K06560
mannose receptor, C type
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114146382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114146382
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xco04054
]
114146382
04090 CD molecules [BR:
xco04090
]
114146382
04091 Lectins [BR:
xco04091
]
114146382
Membrane trafficking [BR:
xco04131
]
Endocytosis
Phagocytosis
C-lectin receptors
114146382
Pattern recognition receptors [BR:
xco04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
114146382
CD molecules [BR:
xco04090
]
Proteins
114146382
Lectins [BR:
xco04091
]
C-Type lectins
Others
114146382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
UL45
Chordopox_A33R
CysR_MRC2_N
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
114146382
NCBI-ProteinID:
XP_027876152
LinkDB
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Position
6:18668973..18687974
Genome browser
AA seq
1448 aa
AA seq
DB search
MSSACNAGMMSAALGLRRMSPKRIALAALVLLMLALQGSTTLTNDSPFILMNKATGFCLA
KRGTRCTEIRWTTGNRLFVVSTKKCLGAQGKSVGSEVSQYDCDEKSDLQKWVCQNGTLLN
LKEQPFYIEVRADESIVLSKTVGPNNQLTIVGTSSGACTRTHREYYTIGGNAFGKICMFP
FMYKDRWYGDCTTYDSKTKRSWCATETKYQHEQQGYCPTSSTEHWNRNFVTGAYYQVNMQ
AALTWAQADASCKQQAAFLVSIVDPVEKAFLTGLTGTGRHKLWIGLSLGSEHGWQWTDEK
PFRYINWDAGHPLPNPGHNCAVLDTSGQFLWQSSTCTKKLGYICYKGGIPPAPPRFEEGF
CSNNWTPYNGHCFYLYRTPKSWPNALTECRKEGSELVNIRNIEDQSFVISQLGYVPSDEL
WIGLNDRTTEGLFDWSDHTTVTFTSWEPGEPTVSTVEEDCVLIKGENGNWADRYCDEKHG
YICMKQNAIEITGDEVELQLDVGCKLGWRRHGSFCYFVGTETKTFEEANEDCKSAASYLA
DVSNGVDNAFLVSLVGLRPEKHFWIGLTNQNNHDVFTWTNTAFVRFTHWNGGMPGNLQGC
VAMASGVSAGLWDILPCTNKEKYICKYMAEGVVSTVPPQTQTPPKCPDGWNRVGTRNVCA
KFFTGPRSEEKTWFEARDYCRAIGGDLLSIHSSSELLVASRGGKAWIGLHFENPNGYVWT
DGSALNFQHWQEGEPSNANNDETCTEFVLYNWDEQGSWNELNCESYNDWLCQIRAGATLK
PPPNNTAPEFNTTLDGWLIWKGKQYFLNRMSKSMEEARDFCKRRHGDLLVINNKEENIFI
WKQISRGYGLWYIGLSVDLDGSFWWLDDTPVSYQRWDENQPNSNAFDENCVTMGYHKGYW
RTSNCGREAQSICERSTSPPVNTTAAPTISLKGGCPQTWKKFGSKCYKIVSDRKVTWEGA
RTQCVNFEAKLVSIPTRQVQAFLITKMLTATNTDLWIGLNCIRQDGFFWSDGKTRQYTNW
GYSKNQRRPGSFYQRWNEEECVLMSSSSAFGVGKWLIKSCNDTNGYICHKDINPTISDNS
DPISPTTYESLRNDSIKAVTQNLTWAEAKKLCENDKANLASLRTEWTNAYVELLALTLKT
PLWIGLNKDETQGYFRFIDGWHLSSTNWAEFEPSRNKPCVYIDVDGKWRTAFCNQTMNSV
CMMSTDVPPTESTVFPGRCPEDTSVEYQDSYTWLPYKGNCYLFVTDEIEWADAASSCVRH
GGVLTSIEDPLEQAFLKSNIEVFQDSHTSFWIGIFKTHKGSWAWLDKTVLDYINWGEDEP
DSDFGAITTKDGTWSSGRRWHDRAYICKTPKVMMTDTDTKPQPHAGDDPRSRVHTSLVVV
MLIAIISTMIVVAFWLYKRSPRPFPTFENPLYFNGEKSQPDVVDTNKLIENAEVSEVSPE
NPEPIFIL
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgcttgcaatgcagggatgatgtctgctgctttgggacttagaagaatgtca
cctaaaaggattgctcttgcagcccttgtgctcctcatgctagcattgcagggatcgaca
acattaacaaatgattccccatttatcctgatgaacaaggccactgggttttgtttggct
aaaagaggtactcgctgcactgaaattcgctggacaaccggtaaccggctttttgtggtt
tcgaccaagaaatgtctgggtgctcagggcaaaagtgtagggagtgaggtgagccagtac
gactgcgacgaaaagagtgacctgcagaagtgggtttgccaaaacggaaccctgcttaat
ctgaaagaacagccgttctacattgaagtcagagcagatgaatcaatcgttctgtccaaa
actgttgggccaaacaaccaactgaccattgtggggacatctagtggggcctgtacaaga
acacacagagaatattacacaattggaggcaatgcgtttggcaaaatctgcatgtttccc
ttcatgtacaaagaccgatggtatggagactgcaccacatatgactccaaaacaaagcgc
agctggtgtgcaactgaaaccaagtatcagcatgaacagcaaggatactgcccaacttct
tccacagaacactggaacagaaactttgttacaggagcttattaccaggtgaacatgcag
gcagctctgacctgggctcaggctgacgccagctgcaaacagcaggctgcgtttctggtt
agcattgtcgatcctgtcgagaaggccttcctcacaggactaacaggaacaggaagacac
aagctttggattggattgagtttgggctcagaacatggctggcagtggactgatgaaaag
cccttccgttacataaactgggatgccgggcacccacttcctaatcccggacacaactgt
gcagttcttgacacctctgggcagttcttgtggcaaagttccacttgcacaaagaaactt
ggctacatctgctacaaaggtggaatcccaccagctccgccacgatttgaagaaggattt
tgctcaaataactggaccccttacaatggacactgtttttacctttaccgcacaccaaag
tcatggcccaatgctctgacagagtgtcgcaaagagggaagtgaactcgttaacatacgc
aacattgaggaccaaagcttcgtcatctctcagcttggatatgtaccctctgatgagctc
tggataggactgaatgacagaaccacagaagggttgtttgactggagtgaccacacaacc
gtcaccttcaccagctgggaacctggagaacccacagtgtccactgttgaagaagattgc
gttctcattaaaggagagaatggaaattgggcggaccgttactgcgatgaaaagcacgga
tatatttgtatgaagcaaaatgccattgaaataactggagatgaagtggagttacagttg
gatgtcggctgcaaacttggctggagaagacatggctctttttgttactttgtgggtact
gagaccaaaacctttgaagaagctaatgaagactgcaagagcgcagcttcctacttagcc
gatgtctcaaatggggtggataatgccttccttgtgagtctggtaggactgagaccggag
aaacacttctggatcggtctcactaatcagaataaccatgatgtctttacctggaccaat
acagcgtttgtgagatttactcactggaatggtggaatgccaggtaacctacaaggttgt
gttgctatggcgagtggggtttcggctggactctgggacatactgccctgcaccaacaag
gagaaatacatctgcaaatacatggcagagggggtagtttcaacggtaccgccccaaact
caaactcctcccaagtgtccagacggttggaatcgagtgggaacaagaaatgtttgcgcg
aagtttttcacaggaccacgttcagaggagaagacctggtttgaagccagagattattgc
agggctatcggaggagacctgttaagcatccacagctcttctgaactattggttgcaagc
agaggtggcaaagcttggattggacttcactttgaaaatccaaacggttatgtatggact
gacggaagtgcgttaaacttccagcactggcaggaaggagaaccaagcaacgcaaacaac
gatgaaacctgtactgaatttgtgttgtataactgggatgagcaaggctcctggaacgag
ctgaattgtgaaagctacaatgactggttgtgtcagattcgagcaggagcaactctaaaa
ccacctcccaacaatacagcaccagaatttaacaccacattagacggttggcttatatgg
aaagggaaacaatatttcctgaacagaatgtctaaatctatggaagaggctcgtgacttc
tgcaaaaggagacatggtgacttgctagtaatcaacaataaagaggaaaacattttcata
tggaaacagatttcaagaggctatgggttatggtacataggcttatcagtggatcttgat
gggtcattttggtggttggatgatactccagtgtcttatcaaagatgggatgaaaatcag
cccaattccaatgcctttgatgagaactgtgttactatgggttatcataagggatattgg
cgtacttctaactgcggaagagaggctcagtccatttgtgaaagatcaacctcaccacct
gtcaacaccactgcagccccaacaatatctctcaaaggtggatgtccacaaacatggaaa
aaatttggttcaaagtgttacaaaatagtaagtgaccgcaaggtgacttgggaaggtgca
agaacacagtgtgtcaattttgaagccaaattagtttccattcctacaagacaagttcaa
gcattcttgatcactaaaatgcttactgcaacaaatacggatctatggataggattaaac
tgtataaggcaagatggatttttctggagtgatggaaaaacaaggcaatacaccaactgg
ggttattctaaaaatcagagacgtcctggatcattttatcaaagatggaatgaggaggag
tgtgtgctgatgtccagcagttcagctttcggggttggtaaatggctgataaagtcgtgc
aatgacacaaacggatatatctgtcataaagatatcaatccgactatctcagataactca
gatccaatcagtcctaccacttatgagagtctgagaaatgacagcatcaaggctgtgact
caaaatctaacatgggccgaagccaagaaattgtgtgaaaatgataaggccaacctggct
agcctacgaaccgagtggacaaatgcctatgttgagttactggctttgactctcaaaact
cctctgtggattggacttaacaaagatgagactcaaggttattttaggttcattgatggc
tggcacttgagctccaccaactgggccgaatttgaaccaagcaggaataaaccttgtgtg
tatatcgatgtggatggaaaatggcggacagctttctgcaaccagactatgaacagcgtc
tgcatgatgtcaacagatgttccacctacagagtccactgtatttcctggacgctgccct
gaagacaccagtgtggagtaccaggatagttacacctggttgccatataaaggcaactgc
tatctgtttgtcacagatgaaattgaatgggcagatgcagctagcagttgtgtaagacat
ggtggtgtcctgacaagtattgaagatcccttggagcaagcatttcttaaaagcaacata
gaagtatttcaagacagccacacctctttttggattggtatatttaagacacacaaaggg
tcgtgggcatggcttgataaaactgtcctcgactatatcaactggggtgaagatgaacct
gattctgattttggagccataacaactaaagatgggacatggagttcagggcgcagatgg
cacgacagagcgtatatctgtaaaacacccaaagttatgatgacagatacagatacaaaa
ccccagcctcatgcaggagacgatccacgcagtcgtgtccacacaagtttggtggttgtg
atgcttattgccatcatctcgacaatgattgttgtcgctttctggctctacaagagatct
cctcgtcccttccccacctttgagaatccattgtacttcaatggcgaaaaatctcagcct
gatgtggtcgacaccaataaattgatcgagaatgctgaagtctccgaagtctccccagaa
aatccagagcccattttcattctgtga
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integrated database retrieval system
