Xiphophorus couchianus (Monterrey platyfish): 114146386
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Entry
114146386 CDS
T05908
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114146386 (fubp1)
03041 Spliceosome [BR:
xco03041
]
114146386 (fubp1)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
114146386 (fubp1)
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
114146386 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Secretin_N
Motif
Other DBs
NCBI-GeneID:
114146386
NCBI-ProteinID:
XP_027876161
LinkDB
All DBs
Position
6:23042503..23056417
Genome browser
AA seq
687 aa
AA seq
DB search
MADYSSVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGDGVVAPPTNEFGYGGQKRPLED
AGGYFPMPNLNIEQPETKKVATNDAFSAMGGMGGPPRSTSEEFKVPDGMVGFIIGRGGEQ
ISRIQQESGCKIQIAPDSGGMPDRSVTLTGAPESIQAAKRLLTEIVEKGRPAPAFHHNDG
PGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGDPF
KVQQAKEMVMELIREQGFREQRGEYGSRVGGGGDSLDVPVPRFAVGIVIGRNGEMIKKIQ
NDTGVRIQFKPDDGTTPDRIAQIMGPPDQAQHAAEIISDLLRSVQAGGPPGHGGGRGRGR
GQGNWNMGPPGGLQEFSFTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNADPN
IKMFTVRGNPQQIDYARQLVEEKIGGPVTPMGGPHGPPGPHGGPGPHGPPGPPGPPGAPM
GPYNPGPYNQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPNLPCTALIDQVRRAEPLCD
DKAAADANAAAWAAYYAQYGQQPQASMTPTSGAPGTAQPNGQGDPQAAGQSGQTDYTKAW
EEYYKKMGQQNQPPQDYTKAWEEYYKKQGQAAPQAAPAAAPAAAQPGGQPDYSAAWAEYY
RQQAAYYGTGNPQAMGAAPQAPQVHRE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcagactacagcagcgtggctccaccgtcctctaacgctggtggggggatgaacgat
gcttttaaagacgctttacagcgagcgagacagatcgcagccaagatcggcggagatggc
gttgtggctccaccaacgaacgagtttggctacggaggccagaaaaggcccctggaggac
gctggtgggtattttcccatgcctaacctgaatatcgaacaaccagaaacaaagaaagta
gctacaaatgacgccttctcagccatgggagggatgggcggccctccaagatcaacatca
gaagaattcaaggttccagatggaatggttggatttattattggaagaggaggtgaacaa
atatcccgcatccagcaggaatctgggtgtaaaatacagattgctcctgacagcggaggg
atgcctgacaggtcggtgacattaacgggggcaccagaatcaatccaggccgcaaagaga
cttcttactgagatcgtggagaagggacgtccggctcctgctttccaccacaacgacggt
ccgggaatgacggtccaggaaattatggtgcctgcttccaaagctggcctcgtcattggg
aagggaggagagaccatcaaaagccttcaggaacgagccggtgtgaagatggtcatgatc
caagacgggcctcagaacacgggtgcagacaagccactccgcatttccggagacccattt
aaagtccagcaagccaaagagatggtgatggagctgatcagagagcagggcttcagggag
cagcggggcgagtacgggtccagggtcggaggaggaggagacagcttagatgttccagtc
ccgcggtttgcagttgggattgtcatcggcagaaatggagagatgataaagaaaatacag
aacgacacaggagtcagaattcagttcaaaccagatgacggcaccacgcctgacaggata
gcacagatcatgggccctccggaccaggcccagcatgcagcagagatcatctcggacctg
ctgaggagcgtccaggctggaggccctccggggcacggagggggcaggggacgtggtcgt
gggcagggcaactggaacatggggccccctggtggcctgcaggagttctcctttacagtc
ccaaccatgaagaccgggctgatcattggaaaagggggcgagacgatcaaaggcatcagc
cagcagtcaggagccaggattgagctgcagaggaaccctccacccaacgccgaccccaac
ataaagatgttcaccgtcagaggaaaccctcagcagatcgactatgccaggcagctggtg
gaggagaagattgggggtccagtcactccaatgggaggcccacatggtcccccaggtcca
catggtggaccaggtccgcatggtcctccgggaccaccaggaccccctggcgctccaatg
ggaccttacaaccctggaccttacaaccaaggccctccaggaccacatggccctcctgct
ccttatcagcctcaaggatgggggaacggttatcctcactggcagcagggccagccggat
ccaaatctgccttgcactgcattgatagatcaagtaaggagggcggaacctttgtgtgac
gataaagcagcagctgatgccaacgcagcagcgtgggcagcgtactacgctcagtacggc
cagcagccccaggcctccatgactccaaccagcggggctccaggcacagctcaacccaac
ggtcaaggtgacccacaggctgcaggtcagagtggacagacagattacaccaaggcctgg
gaggaatattacaagaaaatgggtcaacagaaccagccacctcaggactacacaaaagcc
tgggaggagtattacaagaaacaaggtcaagctgcaccgcaggccgctccagcggcggcg
ccggcggccgctcagcctggaggccagccggactacagcgccgcctgggctgaatattac
cgccagcaggccgcctactacggcactggaaaccctcaggcgatgggtgcagcgccacaa
gcccctcaggtacaccgcgaataa
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