Xiphophorus couchianus (Monterrey platyfish): 114146416
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Entry
114146416 CDS
T05908
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00061
Fatty acid biosynthesis
xco00071
Fatty acid degradation
xco01100
Metabolic pathways
xco01212
Fatty acid metabolism
xco03320
PPAR signaling pathway
xco04146
Peroxisome
xco04216
Ferroptosis
xco04920
Adipocytokine signaling pathway
Module
xco_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
114146416
00071 Fatty acid degradation
114146416
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
114146416
09143 Cell growth and death
04216 Ferroptosis
114146416
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
114146416
03320 PPAR signaling pathway
114146416
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xco01004
]
114146416
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114146416
Enzymes [BR:
xco01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
114146416
Lipid biosynthesis proteins [BR:
xco01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
114146416
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of breast milk
114146416
Exosomal proteins of breast cancer cells
114146416
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
114146416
NCBI-ProteinID:
XP_027876224
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All DBs
Position
6:complement(13027223..13039717)
Genome browser
AA seq
709 aa
AA seq
DB search
MKLKEDINPLLLQVFRSVVWVYSVITFLPWYFFSGAGTNLERARRIKACSISGHPAGPYR
AINSREKLMALVQPGVDTLDKMFEFAARRFPNRDCLGTREVLSEEDELQPNGKVFKKVIL
GNYNWLTYEEAYNAAKCFGSGLAALNQKPHHNIAIFCETRAEWVIAAQACFMYNFPLVTL
YATLGPKAIAHGLNETEVTHIITSKDLLQSRLKAILCDVPRLQYIIVVDIKPTSWSDMPR
GITVYNMEGVKELGSKPVHMDRRQPESSDIAVIMYTSGSTGIPKGVMISHGNLIAGIAGM
AERIPNLNETDTYIGYLPLAHVLELSAELVCISHGCRIGYSSPQTLADQSSKIKKGSKGD
TSMLKPTLMASVPEIMDRIYKNVMTKVDEMSKFQKTLFVLAYNYKIEQISKGYSTPLCDR
IVFNRVRSLLGGNTRVLLSGGAPLSAATQRFMNVCMCCPVGQGYGLTETCGAGTISEMWD
YSTGRVGAPLVCSEITLKDWEEGGYHSTDKPNPRGEILIGGPNVTMGYYKSEGRNHEDFF
VDAKGQRWFCTGDIGEFHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAVLKNCPLIDNIC
AYANSEESYVISFVVPNHKHLMALAEQVQIKGTWEELCNNPKMEKEVLRIITEAAVSGKL
EKFEIPKKIRLSSEPWTPETGLVTDAFKLKRKELKTHYQEDIERMYGGK
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaaggaggatataaaccccctgctcctgcaggttttccgctctgtcgtctgg
gtctattctgtcataaccttcctaccctggtacttcttttccggggccggaaccaatttg
gagcgagcgcgtcggattaaggcctgctctatcagcggacacccagcgggaccctacagg
gccatcaatagccgagaaaagctgatggcattggtgcagccaggagtggacacactggac
aaaatgttcgagtttgcagcgaggaggtttccaaacagggactgcctgggtaccagggag
gtgctgagtgaggaggatgaactccagccaaatggaaaagtctttaaaaaggtgattctg
gggaactacaactggctcacgtatgaggaagcctacaatgcagcaaagtgctttggtagt
ggtctggcagctcttaatcagaagcctcaccataacatcgctattttctgtgagaccaga
gcggagtgggtcatagcagcgcaggcctgcttcatgtacaatttcccactcgtgacactg
tatgccacactcgggcccaaagccatagctcatgggctgaatgagacagaggtcactcac
atcatcacaagcaaggacttacttcagagccgccttaaggccattttgtgcgatgtgccg
cggctccagtatatcatcgttgtggacattaaacccacaagctggtcagacatgcccaga
ggcatcacagtctacaacatggagggtgtgaaggagctgggatccaagcccgttcacatg
gaccgtagacagccggagtcctcggacatcgctgtcatcatgtacaccagtggttccact
ggcatccccaagggtgtgatgatctcccatggcaacctcatcgccggcatcgcaggcatg
gccgagcggatccctaacctcaatgagactgacacctacattggctacctaccactggcc
cacgttttagagctcagcgcagagctggtttgcatctcccacggatgtcgcatcggatat
tcctctcctcagactcttgccgatcagtcctccaagatcaagaagggcagtaaaggggat
accagcatgctaaagccgactctcatggcatctgtgcccgagatcatggatcgaatttac
aaaaatgtcatgaccaaagtggacgagatgagtaagtttcagaagacgctctttgtgttg
gcttataactacaagattgagcagatctccaagggctacagtacgcctctctgtgacaga
atagttttcaacagagtacggtctctgttgggaggaaacactcgagtgctactctctggt
ggagctccactctctgcggcaacgcagcgcttcatgaatgtctgcatgtgctgcccggtg
ggacaaggctacggcctgacagagacatgtggcgctggcaccatcagtgagatgtgggat
tacagtacaggacgggttggcgctccactggtttgctcagagatcactctgaaggactgg
gaagagggtggctatcacagcactgacaagcccaacccaaggggggaaattttgattgga
ggtccaaatgtaacaatgggttactacaaaagtgaaggcaggaaccatgaagacttcttc
gtggatgcgaagggccagagatggttctgtacgggagacatcggagaattccatcctgat
ggatgcctgaagattatcgaccgtaagaaagacttggtgaaactccaggcaggcgaatat
gtctctctcggaaaagtagaagcggttttgaagaactgcccactcatagacaatatctgt
gcctacgctaacagtgaagagtcatatgtgatcagctttgtggttcccaaccacaaacac
ctcatggcattggcggagcaggttcaaataaagggcacgtgggaagagctctgcaacaat
cccaagatggagaaggaggttctccgcatcattactgaggcggccgtctcaggaaaactg
gagaagttcgagattcccaaaaaaatccgcctgagttccgagccatggacaccggagacc
ggcttggtcaccgacgcattcaaattgaaacgcaaggagctcaaaacacactaccaagag
gacattgagaggatgtatggtgggaaataa
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