Xiphophorus couchianus (Monterrey platyfish): 114146470
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Entry
114146470 CDS
T05908
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114146470
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
114146470
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
DALR_1
Motif
Other DBs
NCBI-GeneID:
114146470
NCBI-ProteinID:
XP_027876333
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Position
6:2253892..2341733
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AA seq
1006 aa
AA seq
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MRHRNAGAVHQHHIPDEERGNNEQSREQVAPVFSLPPPPSSHHRVRTPTTAAQRQSLQEL
PCVSQPPWRPVHSGDPLPLASCDSSRRPSQRGGEHSAGQPVHLRQDPIPWAPDGSQQPPQ
LQSEREAVFPSCHCSFSEKEASHPKNQSCPVDFLPTPPFPPLLPPPPTSSSSSLLFSRRS
GRGDRLRRSANNYQQANTVERCRGGGGAGGHQDHRQLQPQQQQQHCHLGLQQRDPSPEGS
RANSQKGHSLDARESNEAKKAFECQIQDLQQQQIPQLRAQQQLLVGSSLPVNYCASGSGE
LCRTHRAPLLQQQERQQLLQHRQQQRLQQQQGAPGLRPQPSQQQQQHCDRERNKCGRIAA
EGGQAQTQSRVTPPATPHAYAGNSSASGSHSSKDSPNYGSSYHLWPESQHKGEERIRIDL
HKTSTEQKKLSHAGSKPSLSESSGRLPQIAMNTCKYNGGVVRPLVGSLASSSRRNLAELD
SETQPLQTLHSSGLEVVVSKGNGGEDPSKASNESLVREGSGRGGGRAPQKKNKDIGYKLG
HRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYTKESSYSFALKCLISLSTVILL
GLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVCAIHPIPGQYVFTWTARLA
FTYTPSVADADVDIILSIPMFLRLYLIGRVMLLHSKLFTDASSRSIGALNKINFNTRFVM
KTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDKQEVTSNFLGAMWLISITFLSIGYG
DMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLCKRVKNT
AANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQAQKLRSVKMEQRKLNDQANTL
VDLAKTQNVMYDLVSELQERSEELDKRIGTLEDKLDSVAGSLQALPCLISQAITQQQQDF
LDGFVHRFRPASLASERSERSDRSWTSTTRRRRSPSTAPHTSSDSG
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggaacgcgggagcggtccatcagcaccacataccagacgaagagcgaggg
aacaacgagcagagccgagagcaagtcgcgcccgttttcagtctgccgcccccgccctct
tctcaccacagagtccgcactccaaccaccgccgctcagcgtcagagcctccaggagctc
ccgtgtgtgagccagcccccttggagacctgttcacagcggcgacccgctgccgctggcg
agctgcgacagcagccggcgaccttcacagcgaggcggagaacacagcgccggtcagccg
gtgcacctgcggcaggatcccattccctgggccccggacggctcgcagcaaccgccgcag
ctgcagtcagagagggaggctgtttttccaagctgccactgcagtttctcggaaaaagaa
gcgagccatcctaaaaatcaatcctgtcctgtagactttctccccaccccgcctttccca
ccacttctgccgccgccaccaacgtcttcctcctcctctctgctcttttcccggagatct
ggaagaggggatcgtctccgaaggagcgccaataattaccaacaggcgaacaccgtggaa
cgctgcaggggaggaggaggcgcaggaggacaccaagaccacaggcagttgcagccacag
cagcagcagcagcactgtcatttaggactccaacagagggacccctcccctgaaggaagc
cgtgcaaactcacaaaaagggcactctttagatgcacgcgagtcaaacgaggctaagaaa
gcgttcgagtgtcagattcaggatctacagcagcaacagatcccacaattgcgagcgcag
caacagctactggtgggaagcagcctgcccgtcaactactgcgcaagcggctccggagag
ctatgtagaactcaccgggctcctctgctgcaacagcaggagcggcagcagctgctgcag
catcggcagcagcagcggctgcagcagcagcaaggcgcgccggggctccgtccccagcct
tcgcagcagcagcagcaacactgtgacagagaacgcaataagtgtggacggatcgccgcg
gagggcggtcaggcgcagacacaaagtcgcgtaaccccccctgcaacaccgcacgcatac
gcggggaactcgtctgcttctggcagccacagcagcaaagacagcccaaactacggctcc
agctatcacctgtggcccgagagccagcataaaggagaggagaggatccgcatcgacctc
cataagacctcaactgagcagaagaagctgagccatgctggatccaagccctccctctct
gagagcagtggccgactccctcagatagccatgaacacctgcaagtacaatggcggagtg
gtaagaccactagtaggcagcctggcgtcctcgtcgcgccgaaaccttgcggagctcgac
tcagaaacgcaacccttgcagacgctgcacagctctggcttggaggtggtggtgtccaag
ggcaacggcggagaggaccccagtaaggcgtccaacgagagcctggtaagggagggtagt
gggcgaggcggcggcagggctccacagaagaagaacaaggacattggctacaagcttggt
caccggagggcgctgttcgagaagcgaaagcgactcagtgactacgcactcatcttcggg
atgtttgggattgttgtcatggtgacggagacagaactttcatggggggtttacactaag
gaatcctcatactcatttgcactgaaatgccttatcagcctttccactgttattttgctt
ggtcttataataatgtaccacgcccgagaaatccagctgttcatggtcgacaatggagca
gatgattggaggatagccatgacatatgagcgaatcttcttcattgtgctggagcttctg
gtgtgtgccattcaccccatcccaggccagtatgtcttcacttggacggcgcggctggcc
tttacctacacaccgtctgtggctgacgccgatgtggacatcatcctctctatacccatg
ttcctgagactctacctgattggcagggtcatgttactccacagcaagctgttcacggac
gcctcgtcccgcagtatcggcgccctcaacaagatcaacttcaacacgcgctttgtcatg
aaaaccctcatgaccatctgtccgggaacagtgttgctggtgttcagtatatcctcctgg
atcattgctgcatggactgtgcgtgtctgtgagaggtatcatgacaaacaggaagtgacc
agtaacttcctgggagccatgtggctcatctcgatcaccttcctttctattggctacggt
gacatggtaccacacacgtactgtgggaaaggcgtgtgtcttcttacagggatcatgggg
gcaggttgcactgcgctggtggtagcagtggttgccaggaagctggagctgaccaaggct
gagaagcatgtccacaacttcatgatggacacacaactctgcaaacgagtaaagaacaca
gctgccaatgtactcagggaaacatggctcatttacaaacacaccaagctggtgaagaag
atcgatcacgctaaggtgcggaaacaccagcgcaagtttctccaagccatccaccaagct
cagaaactgcgcagcgtgaagatggagcagagaaaactcaatgatcaggccaacaccttg
gtggaccttgcaaagacccagaatgtgatgtatgacttggtgtcggagctgcaggagcgc
agcgaggagctggacaagcggatcgggacactggaggacaagctggactcggtggcgggc
agcttgcaggcactgccctgcctcatctcccaagccataacccagcagcagcaggacttc
ctggacggcttcgttcaccgcttccggcctgcctcgctagcgtcggagcgctctgaacgc
tcagacagatcttggacttccaccacccgtaggcggcgctctccctccacagcaccacac
acgtcttctgacagtggataa
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