Xiphophorus couchianus (Monterrey platyfish): 114146488
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Entry
114146488 CDS
T05908
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein C-like
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114146488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114146488
Spliceosome [BR:
xco03041
]
Common components
Common spliceosomal components
hnRNP proteins
114146488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CDC27
Drc1-Sld2
Nup35_RRM_2
UPF0688
RRM_5
PPP4R2
Motif
Other DBs
NCBI-GeneID:
114146488
NCBI-ProteinID:
XP_027876383
LinkDB
All DBs
Position
6:23684626..23693606
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AA seq
322 aa
AA seq
DB search
MERSSSTSSLMASSNVTNKTDPRSLNSRVFIGNLNTLLVTKADVEAIFAKYGKIVGCSVH
KGYAFVQYANERNARAAVTGEDGRMIVGQVLDCNLAGEPKPHRSKTSKRSAGDMYSSSSF
DLDYDFQRDYYDRMYSYPSRVPAPPPLSRAVIPSKRPRVSLSGGSSRRTKSSFSSSSKSS
QRTSSSRTMRVDELQIIKRELSQIKSKVDDLLESLERMEKDHSKKSAKSIKPEPGEVTSP
PHSSSKKNDGIKRERESQDMNNSDEEEEDDDDEEEEEDGDLLEEEEVKSQEREEEEEEEE
EEGEHVEGDEDDGDSVNGDDDS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggaacgttcatcctccacttccagcctcatggccagcagcaacgtcaccaacaagacc
gacccgcgctccctcaactcccgggtcttcatcggcaacctcaacaccctgctggtcacc
aaggcggacgtggaggccatcttcgccaagtatgggaagattgtcggctgctccgtccac
aagggctacgccttcgttcagtacgccaacgagaggaacgcccgggccgccgtcactggc
gaggacgggaggatgatcgtcgggcaagttctcgactgtaacctcgccggagaacccaaa
ccacaccggtcaaaaacctccaaacgctcggcgggagacatgtacagtagctcctcgttt
gaccttgactatgattttcaaagagactactatgacagaatgtactcgtacccgtctcgc
gtccctgcgccgccgccgctgtcgcgggccgtcatcccgtccaaacgcccgcgggtcagc
ctgagcggagggagcagccggcggaccaagagcagcttctcctcttcatcaaagagcagc
cagaggacttcatcgtccagaacgatgagggtggacgagctgcagatcatcaagcgtgaa
ctgtcgcagattaaaagcaaagtggacgacctgctggaaagcctggagcgaatggagaag
gaccacagcaagaagtctgcaaagagcataaagccagagccgggcgaggtgacctcaccg
ccgcactccagcagcaagaagaacgacggcataaagagagagagggagagccaggacatg
aacaactcggatgaggaggaagaggacgacgatgacgaggaggaggaagaggatggagac
ctcctggaggaggaagaggtcaagagtcaggagagggaggaagaagaagaagaggaagag
gaggaaggcgaacacgtggaaggagacgaagatgacggcgacagcgtgaacggtgacgac
gactcgtag
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