Xiphophorus couchianus (Monterrey platyfish): 114146524
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Entry
114146524 CDS
T05908
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04020
Calcium signaling pathway
xco04148
Efferocytosis
xco04218
Cellular senescence
xco04310
Wnt signaling pathway
xco04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
114146524 (nfatc4)
04020 Calcium signaling pathway
114146524 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114146524 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
114146524 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
114146524 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114146524 (nfatc4)
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
114146524 (nfatc4)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
114146524
NCBI-ProteinID:
XP_027876463
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All DBs
Position
6:23889265..23916314
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AA seq
888 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPPQRQIQGPSPARTAEPESSVGGEEEGDGALLRLDSS
NLDNHLAIAHAGHSINIPSPPPSSNQRAGMHSPPPRRAAVREFSGTYESLPARSVQVSES
CVVECPSIQITTISPEDDPAPPVPSYWDMGSGGGWDRERLYLPLLDPFSYRDRFPGSLSP
SPASSPSSRGWLSPASSCDSLLVEEEELNEANVGFGLSPSSRPTSPGGKKRRNSPLASPC
ISRRSSYSEDLQGCNLEGGESASQSQALPGSCELNIPQKTRKTSLEQLSPREVDQESGLG
RSSPCPLPETQQPRREPPSLGMDYLPVPPALAWGRTRASAHSPLFRSNALPPLDWPLPSQ
FDQYELRIEVQPRPHHRAHYETEGSRGAVKAAPTGHPVVKLCGYAERKPLSLQVFVGTAD
DRSIRPHPFYQIHRVTGKMVGTASHESVQAGTKLLDIPLNPENNMTALIDCAGILKLRNS
DIELRKGETDVGRKNTRVRLVFRTHLPVAPPVGPPGRVLALQVASLPIECSQRSAQELPV
IESVSVTSCSVEGGEELLLSGTNFLPISRVLFMERGTDGKLQWEEEAHVDQDNSNECLLC
VRVPAYSDLSVSRPVSVSLYVSNGKRKRSSTHCFKYLPVMFKEEDPLLSRPSVPPLDGGT
VGPPRMDRGFHVSDDRGLGFHLPPYPSTYSPPCPAMSYQEEYCPKPDSAVEEPVGSRAPL
SERNPSFENLELGFTELLPPLYPRGPQPPSPSPSPWLDSPYLSSSPSPSHSSSLSPFPTE
SPLANSPLPPIPTSPFPQYSTYPQELCPSPPSNPYQDTCPAPYSHYEGWEPQGRMLGTSH
GGEGDAKNQECPLEFTSSASMHHITFEEVSEFIGEDIQAYQSGSHMNN
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctcgggctgggaggagggcgagttcgagttcaagctggtgttt
gaggaggacccgcctcagcggcagatccaggggccgtccccggcgcgcacagccgagccg
gagagctccgtcggcggggaagaggaaggtgatggcgccctgttgcggttggactccagc
aacctcgacaaccacttagccatcgctcatgcaggacactcaatcaacatccccagcccg
ccgccctcgtccaatcagagggcagggatgcattcgccacctccccgacgggccgccgtc
agagagttcagcggcacctatgagagcctgccggctcgctccgttcaggtgtcggagtcc
tgtgtggttgagtgccccagcattcagatcaccaccatttccccggaggatgacccggcg
ccgcccgtccccagctactgggacatgggcagcggcggcggctgggacagggagcgcctc
tacctccccctgctggaccctttctcctaccgcgaccggttccccggctccctcagcccc
agccccgcctccagcccgtcgtcccgcggctggctcagccccgcgtccagctgcgactcc
ctgctggtggaggaagaggagctcaatgaggccaatgttggtttcggactctccccgtcc
tccaggcccacttccccaggaggaaagaagcgcaggaactctcctctggcgtctccctgc
atctcgcggaggagcagctactcggaggacctgcagggatgcaacctggagggcggagag
tccgcctcgcagtcgcaggcgctgcccggcagctgtgagctcaacatcccgcagaaaacc
aggaagacgtccctggagcagttgtctcccagagaagtggaccaggagtcgggtctgggc
cgaagctccccctgtccgctgccggagacccagcagcccaggagagagcccccgtctctg
ggaatggactacctccctgttccccctgccctggcctggggcagaaccagagccagcgcc
cacagtcctctcttcaggtctaatgctttgcctccacttgactggccgctcccatcccag
tttgaccagtatgagctgcgcatcgaggtgcagccccggccacaccatcgagcccactac
gagacggagggcagcagaggcgccgtcaaagccgcaccaacaggacatcctgttgtcaag
ctgtgcggttacgcagagaggaagccgctgtcgctgcaggttttcgtcggaacggctgac
gaccgctcaatcaggcctcatcctttctaccagatacacagggtgaccgggaagatggtc
ggcaccgccagccatgaaagcgtccaggcagggaccaaactgttggacatccccctcaac
cccgagaacaacatgaccgccctcatcgactgcgctgggattctgaaactgagaaactcc
gacatcgagctgcgaaaaggcgaaacggacgtcgggaggaaaaacacccgcgtgcgtctg
gtgtttcgtactcacctccctgtagcgccccctgtgggccctcccgggcgcgtcctggct
ctgcaggtcgcctctttgcccattgaatgctctcagcggtcggcccaggagcttcctgtc
atcgagtccgtcagcgtcacgtcctgctcggtggagggaggcgaggagctgctgctgagc
ggcaccaacttcctgccgatctccagagtcctcttcatggagagaggcaccgatgggaaa
ctacagtgggaggaggaggcgcatgtggaccaggacaacagcaacgagtgtttgctgtgt
gtgagggttcctgcctacagcgacctctccgtcagtcggcctgtgtctgtcagtctgtat
gtctccaacgggaagaggaagcggagcagcacgcactgcttcaagtaccttcctgttatg
tttaaagaagaggatcctttgctgtcccgtccctctgttccccctctggacgggggaact
gtgggtccgcctagaatggacagaggcttccacgtgtccgacgaccgcggcctcggcttc
caccttcccccctacccctccacctactcccctccctgcccggccatgagctaccaagag
gagtactgccccaaacctgacagcgccgtggaggagccagtcgggtccagggcgccactg
tccgagcgtaaccccagctttgagaacctggagctgggcttcactgaactgctcccccct
ttgtatccccgcggtcctcagcctccgtccccgtctccttccccatggctggactccccc
tacctgtcctcttcaccctctccgtcccactcctcctctctcagcccgttccccactgaa
agccccctcgccaactccccgctgcccccaatccccacatcgcctttcccgcagtactcc
acttatcctcaggagctgtgtccctcgcctccgtccaacccttaccaggacacctgtccg
gcgccgtactcccactacgagggctgggaacctcagggaaggatgctgggtacgagtcat
gggggagagggggacgccaagaaccaggagtgtccactggagtttaccagctcggcctct
atgcaccacattaccttcgaagaagtgtcagagttcatcggggaggacatccaggcctac
cagtcaggctcgcacatgaacaactag
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