Xiphophorus couchianus (Monterrey platyfish): 114146545
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Entry
114146545 CDS
T05908
Name
(RefSeq) myomesin-1-like isoform X1
KO
K24495
myomesin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114146545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114146545
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
114146545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
C2-set_2
Ig_CD22
C2-set_3
Motif
Other DBs
NCBI-GeneID:
114146545
NCBI-ProteinID:
XP_027876513
LinkDB
All DBs
Position
6:complement(19039873..19062013)
Genome browser
AA seq
1507 aa
AA seq
DB search
MSGSVQVTQKQQQKLQLHQQLEEKQHYESSYYLSTRSSVSKQAFSTHKTSSHRLKTSVKT
DKGQQVVKLSPLPKRAKRTYLAMDKDKEVIGYVIPMFRANHDVVRGLMEAQEDDVTEEGI
NYVAMRNLFVREAREAMEVKVEKKTRSKHVRESAERMEFDRALEEWSEFRKKMHPDRLTH
PPEFIVKPRGQTVWEGKTVRLHCTVAGWPKPRIAWYKNNVLIDAKAHPEKYTAESTYNMH
SLEIKNCDFLDTAQYYVSALNVKGEASSAATVVVKRFQDREEGPFDPKPHGFCPEHGVTF
HTSIIDKFEVAFGCEGETLSLGCTVIIFPTVKKYQPEVVWYRNSVPLKPSKWVHTHWSGE
RATLTLTHLNKEDEGMYTLRVNTKSGFDSYSAYVFVKDADVELEGVPVAPLDVCCHDANK
DYVVVTWKQPAVEGSSPILGYYIDRCEVGTHHWAQCNDAPVKYARFPVTGLVEGRSYVFR
VRAFNNVGVSRPSRISDPVVAMDPSDRARLRAGPLAPWTGVIKFTEEEPTVGVIPGEPTD
VVVTEATKSYVVLAWKPPEQRGHEGVMYYIEKCIQGTDTWQRVNTGMPVKSPRFAIFDLA
EGKSYNFRVRCCNSAGVGEPSVPTGDTIVGDKLDLPSAPGNPVATRNTDTSVVVTWGASK
DVKHLVGYYIESSVTGTDVWMPCNNKPVKQTRFVCHGLTTGSNYVFRVKAVNAAGYSQNS
SNSDAVLVQAAISVPASPTNVNLLEAVKDYMVLGWTAPTDNGGADIRGYFVDYRTVKGNI
YGKWHEMNQKALTTTSYKAENLKENVFYQFQVRAMNMAGVSKPSLPTASLECKEWTITIP
GPPVGLYVMEVRDTSVVVLWEPPVFDGRSPVNGYYLDIKDASAGEEGWKAVHEKTNKGKF
MKVTGLTAGTAYVFRVRSQNLVGVGKPSQDLGPILAQTRPGTKEIYVDVDDNGVISMIFE
CSEMKEGSQFVWFKNYQEITDTSRLTIATQGGKSRAIFNSLSMEDLGTFSCMVTNTEGIS
SSYILTEEALLRLLDLSHEHKFPVIPFKNEMAMELLEKGCVRFWAQMEKFTSACQVEYVF
NDVIIEQGKKYTMKFDKSSGLIELFMDSLEVTDEGTFTFNLVDGKAKGTTSLVLIGDEFR
ELQRKSEFERAEWVRKQGPHFVEYLGFTVTQECDVLLKCKLGNIKPVTEIIWSKDSIEIA
EDDEDAVKIEKKDCDLTFNIGKWVIKQEQKKGRKKPSAKDVLLPPRPKISKQDAGIYEVF
LRDERGKDKSAFNLTEAGYQAVMNELFRVIANSSSDIQIQSSENGIILYSNVTYYDEDLR
VGWLHKDAKIAASERVKSGVTGEQLWLKINEPTEKDKGKYTMDIFDGKDGVKRVLDLTGK
AWQDAFEEFQRLKAAAIAERNRARVVGGLPDVVAIQEGKSLNLTGNVWGEPAPEVCWVKN
DKELVSDDHYKLKFEHGKFASITIAAVTTADSGKYALVVKNKYGKEAGEFTVSVYNPDEE
SREDKKD
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatcagtgcaagtgactcagaagcagcagcagaagctgcagctgcatcaacag
ctggaggagaagcagcactatgagagcagctattacctgagcaccaggtcatctgttagc
aagcaggccttctcaactcacaagaccagcagccatcgcctgaagacctctgtgaagaca
gacaaggggcagcaggtggttaaactgagcccgctacccaaaagagccaaacgtacctac
ctggccatggacaaggacaaagaagtaataggctacgtcattcctatgtttagagcaaac
catgacgtcgtacggggactgatggaggctcaggaggatgatgttacagaggagggtatt
aactatgtggcaatgaggaacctgtttgtcagggaggccagggaggccatggaggtaaag
gttgaaaagaaaacaagatcaaagcatgtcagggaatcagcagagcgcatggaatttgac
agagcgttggaggagtggtcagagtttcgtaagaaaatgcacccagataggctgacgcac
cctccggagtttattgtcaagccccgtggacagactgtgtgggagggcaaaacagtcagg
ctgcactgcaccgtggccggatggccaaaaccaaggattgcttggtataagaacaatgtg
ctgatcgatgccaaggcccatcctgagaagtacacagccgaaagcacttacaacatgcac
tccttggagatcaagaattgcgatttcttggacactgctcagtattatgtctccgctctc
aatgtgaaaggggaagcttcctctgcagctactgttgttgtcaaaaggttccaagataga
gaagaaggtccatttgatcccaaaccacatggtttttgccctgagcatggggttactttt
catacaagcattattgacaaatttgaagtggcctttggttgtgagggggaaacactgagt
ctgggctgcactgtcatcatttttcccactgtgaaaaagtaccagcctgaagttgtgtgg
tacagaaactctgtacctttgaagccctccaagtgggtgcacacacactggtctggagaa
cgcgccactctcactctaacccaccttaacaaggaagatgagggcatgtacaccttgcgc
gtcaacacaaaatccggctttgactcctactcagcctatgtatttgtcaaagatgctgat
gtggagcttgagggggttcccgtggcccccctggatgtgtgttgtcacgatgccaacaag
gactatgtggtggtaacctggaagcagccagcagtggagggcagcagccccatcctcgga
tactacatcgacaggtgtgaagtgggcacccatcactgggctcagtgtaatgatgcccca
gtcaagtacgcccggttccctgttacagggctggtggaggggcgttcttatgtctttagg
gtgcgtgcctttaacaacgtgggagtcagtcgtccatcccgcatctctgatcctgtggtt
gccatggatccttcagaccgagctcgactcagagctggaccactggcaccttggactggg
gtgatcaagttcacagaagaggaacccactgtgggtgtgattcctggagaacctactgat
gttgtggtcactgaggccaccaagagttatgtggtgcttgcctggaagcccccagagcaa
aggggtcatgagggagtcatgtattacattgagaaatgtattcaagggacagacacctgg
cagagggtgaacactgggatgccagtgaagtcccctcgctttgcgatttttgacctggca
gagggtaaatcatacaacttccgtgtgcgatgctgcaactccgctggcgtgggcgagccc
tccgtacccactggagacaccatagttggtgacaaacttgatcttccctctgccccaggc
aatccagtggccaccaggaacacagatacctcagtggttgtcacctggggggcatctaag
gatgtaaagcacttggttggctattacattgaatctagtgtgacgggaactgatgtgtgg
atgccttgcaacaataaacctgtcaagcagaccaggtttgtgtgccacggcctcaccaca
gggtccaactacgtgttcagagtaaaggcggtgaacgctgctggatatagccagaactcc
tccaattctgatgccgtgcttgtacaggctgctatctctgtacctgcaagccccaccaat
gtgaacctactggaagccgtgaaggactacatggttctgggttggactgcacccactgac
aacggaggagccgacattagaggatactttgtggattacagaacagtgaaggggaacatt
tatggaaaatggcatgaaatgaaccaaaaggctctaaccacaacttcctataaggccgag
aacctgaaggaaaacgtcttctatcagttccaagtccgtgcaatgaacatggcaggtgtg
agtaaaccctctctgcccactgcaagtttggagtgcaaggaatggaccattactattcca
ggaccccctgttggtctctatgtgatggaggttcgtgacacctctgttgtggtcttgtgg
gaacctcctgtgtttgatggacgcagccccgtcaacggctactacctggacatcaaggac
gcgtctgcaggcgaggaaggctggaaggctgtgcatgagaagaccaacaagggaaagttc
atgaaggtgactgggctgacagcaggaacagcctacgtcttccgtgtgcgttctcagaat
cttgttggagttggaaaaccctcccaagatttgggtccaattctggcccagactcgccct
ggcaccaaggagatttatgtggatgttgatgacaacggtgtcatttctatgatttttgaa
tgctctgagatgaaagaaggctcacagtttgtctggttcaagaactaccaggaaatcaca
gacacatctcgtctcactattgccacccagggcggcaaatccagagctatctttaacagt
ctctctatggaggatctgggcaccttctcctgtatggtcaccaacaccgaaggcatctcc
tctagctacattctcactgaggaggccctcctgcgtctcctggaccttagccatgaacac
aagttccctgttattcccttcaagaatgaaatggccatggagctgcttgagaaaggctgt
gtgcggttttgggctcagatggagaaattcacttctgcctgccaagtggagtatgttttc
aatgatgtcatcattgaacaaggaaagaaatacacgatgaagttcgacaagtccagcggc
cttatagaactatttatggactctctggaagtcactgatgaaggaacatttacctttaac
ctggtggatggcaaggctaagggcactacaagtctagtgctaattggagatgaatttagg
gagctacaaaggaaatctgagtttgagagagcagaatgggtcaggaaacaaggtcctcac
tttgttgagtaccttggctttactgtcactcaagaatgtgatgtgctgctaaaatgcaag
cttggaaatatcaaaccagtgactgagatcatatggtctaaggacagcattgagattgca
gaggatgatgaggatgctgtgaaaatcgagaaaaaggactgcgacctgacctttaatatt
ggaaagtgggttattaagcaagagcaaaagaaaggaaggaaaaaaccatctgcaaaggac
gttctcctgccaccaaggcctaaaatctccaagcaagacgcaggtatctacgaggtcttc
ctgagagacgagagaggaaaagataagagcgccttcaatcttacagaagcaggataccaa
gctgtaatgaatgagctcttcagagttattgccaattcttccagtgacattcaaattcag
agttctgaaaatggcatcatcctctactccaatgtgacatattatgatgaggacctgcgt
gtcggctggcttcacaaagatgccaagattgcagcttcagagagagttaagtccggcgtc
acaggggagcagctttggcttaagatcaatgaacccacagagaaggacaagggcaaatac
accatggatatctttgatggcaaggatggagtaaagagagtcttggatctgactggcaag
gcatggcaggatgcatttgaagaattccaaaggctcaaagcagcagcaattgcagaaaga
aaccgcgctcgtgttgttggaggcctgccagatgtggttgcaatccaggagggcaagtcc
ctgaacttgactggcaacgtgtggggcgagccggcgcctgaggtgtgctgggtgaagaac
gacaaggagctggtgtcggatgaccactacaagctgaagtttgagcatggcaagtttgcc
agcatcacaatcgcagctgtcaccacggccgactctggcaaatacgccctcgtggtgaag
aacaagtacggcaaggaggccggcgagttcactgtcagcgtgtacaaccctgacgaggag
agcagagaggacaagaaagactaa
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