Xiphophorus couchianus (Monterrey platyfish): 114146557
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Entry
114146557 CDS
T05908
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114146557
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
114146557
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
Motif
Other DBs
NCBI-GeneID:
114146557
NCBI-ProteinID:
XP_027876536
LinkDB
All DBs
Position
6:complement(24998468..25110291)
Genome browser
AA seq
1310 aa
AA seq
DB search
MESKRVAGIIPRVARLLLLLGLFGTTAEEECDSPLVSNLLPSSFRSSSQLSSSHAPGFAK
LNRRDGAGGWSPLTSDRHQWLEVNLGERTKITAVATQGRYGSSDWLTSYQLMFSDTGHNW
KQYRQEDSIGSFPGNSNADSVVQYKLQQPVVARFLRLIPLDWNPNGRIGLRLETYGCPYT
SDVVTLDGSSSLVYRLNPGSRRAQRDVIALKLKTLRNSGMLLQAEGREGLGLRLELDRGK
LLLLFRRGRTLSAEPQRLAALGSLLDDQHWHHVAVELHGLHLNLTVDKHTLRVKIPPQFH
HLDIQELSVGAVQALGSHKPFHSKRNFHGCLENLLFNGLNLIELAKVKDHKVSLVGNVTF
SCAEPVPVAVTFPGLQSFLQLPWTTPSSSGSVSIGFQFRTWNKAGLLLSFELPQQGGVAW
LFLIEAKLRLQIQKGGRVLLELSAGSALSDGQWHSVALTSGRSHLSVCVDKDEGGSAQAS
LSFPVAVESHVFFGGCPAGDAPGCRNHFSSFQGCMRLLSLDGSIMDLIAVQQLGNYSNLQ
IDMCGIIDRCSPSRCEHGGYCSQTWTVFHCNCSDSGYSGATCHSSVYEESCEAYKHSGNT
SGYFYIDVDGSGPIKPQLVYCNMTESDTWMIIQHNNTELTRLRPVSGVDQQSLHFSYSSE
EEQLLGSIGQSEHCEQELSYHCRKSRLLNTPEGSPFSWWLGGRAPGHEQTYWGGAHPGSQ
QCGCGLRGDCVDPQHYCNCDADRLEWTEDSGLVTHKESLPVRSLVLGDLQRPGSEAAYRV
GPLRCYGDKNFWNAAFFDKETSYLHFPTFHGELSADISFFFKTTSSSGVFLENLGIKDFI
RIELSTSTRVVFSFDVGNGPLEVKVESTVPLNDNRWHRVRAERNIKEASLRLDDLPVATQ
EAPADGHVHLQLNSQLFIGGTASRQRGFRGCIRALQLNGVTLDLEERAEMTPGVRPGCPG
HCSSYGSLCQNQGRCVERAAGFHCDCSLSAYTGVFCQTELSASFKPGTSVRYTFKEPYEL
TRNSSALPSSIYSDTTLRGENVSMSFRTAQSPALLLYVGSYYREYMAVLINKHDKLEVRY
KLEGNRDAEVLRSSSTRNLANGQLHSVTIRRLTHTVSVQVDQNAREDFNLTSDGEFNAIK
SLVLGKVHESGDLDSHLVRLASLGFTGCLSVVQFNSINPLKAALLHPDTSPIIITGPLVR
SNCGSAASANPYAAENIHHISDRSGSVGSGQPLVNAIRTDSALIGGIIAVVIFVVLTGLA
VAARYLYRRKDTYRNQEGNAVKQEDSPDFPFNNQTDSQNLSSENPTEYFI
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggagtctaaaagagtcgctgggattattcctcgggttgcccggcttcttctccttctt
ggcttgttcgggacaaccgcagaagaagagtgtgacagccctttggtgtccaacctgctg
ccttcatccttcaggagctcctcccagctgtccagcagccacgcaccgggattcgctaaa
ctcaaccggagagacggagctggaggctggtcccccctcacctcagaccggcatcagtgg
ctggaggtgaacctgggcgagcggaccaagattacagctgtcgccacacagggccgctac
ggcagctctgattggctgacgtcttaccagctgatgttcagcgacacgggacacaactgg
aagcagtacagacaggaggacagcatagggtcttttccaggtaactctaatgcagacagc
gtggttcagtacaaactgcagcagccggtcgtggcccgcttcctgcgcctcattcctctg
gactggaatcccaacgggcggatcggactgcgcctggagacctacggatgtccgtacacc
tctgatgtggtgactttggatggcagcagcagtttggtgtacagactaaatcctgggtca
aggcgggctcagagagatgtcatcgcattgaagctcaaaaccttgagaaactcagggatg
ctgctgcaggcggagggaagggaaggacttggcctccgtctggagttagacagaggaaag
ctgctgctgctgttcagacgaggtaggactttatctgctgaacctcaacgtcttgcagct
cttggaagccttttggatgatcagcattggcaccatgtggcagtggagctacacggcctt
cacctcaacctcacagtggataaacacacactgagggttaaaatcccgccacagttccac
cacctcgacatacaagagctgagcgtgggggcagttcaggctctcgggtctcacaagcca
tttcactccaagaggaacttccatggctgcctggaaaatctgctgttcaacggtctcaac
ctgatcgaactcgctaaagtcaaggaccacaaagtttctctagtgggcaatgtgaccttt
tcctgtgccgagccagttcctgttgccgtgacgtttcccggcctccagagcttcctccag
ttgccatggacaacgccatcgtcttcggggagcgtgtcgattgggtttcagtttcggacc
tggaacaaggcggggcttctgctcagctttgagctccctcaacagggaggcgtggcctgg
ttatttctgattgaggcgaaactccgcctccagatccagaaaggaggacgggttctgctg
gagctcagtgcaggttctgcactcagtgacggccagtggcattcagtggcactgacctcc
ggtcgaagtcatctgagtgtctgtgtggataaagatgaaggcggcagcgctcaggccagc
ctgtcatttcctgtcgcagtagaaagtcacgtcttcttcggtggttgtcctgctggagat
gctccaggatgtagaaatcacttcagttccttccagggctgcatgcgtttactcagtctg
gacggcagcattatggacctgatcgcggtgcaacagctgggaaattacagcaacctgcag
attgacatgtgtggaataattgacaggtgctctccgagtcgctgtgaacatggcggctac
tgcagtcagacctggaccgtcttccactgcaactgctccgacagcggctacagcggcgcc
acctgccacagctctgtgtatgaggagtcctgtgaagcgtacaaacacagcggcaacacg
tcgggatatttttacattgacgtggacggcagcggacccatcaaaccacagctggtctac
tgcaacatgacagaaagcgacacatggatgattatccagcacaacaacactgagctgacc
agactgcgaccggtttctggtgtggaccaacagtcgctccacttcagctactcatctgaa
gaggagcagcttttaggctccatcggccaatcagagcactgtgaacaggaactatcctac
cactgcaggaagtcccgccttctcaacaccccagaggggtctccgttcagctggtggctc
ggcggccgcgcccccggccatgagcagacgtactggggaggagctcatccaggcagccag
cagtgtggctgcggcctgcggggcgactgcgtggatccacaacactactgcaactgtgac
gcagacagattggagtggactgaggactcaggcctggttacccataaggaaagcctccca
gtcagatctctggtattgggtgacctccagaggccggggtcagaggcagcgtacagggtg
ggaccactccgttgctacggagacaagaacttctggaacgctgcattttttgacaaggag
acatcgtacctccacttccccaccttccacggtgagctgagcgcagacatctccttcttt
tttaagaccacttcttcctctggagtattcctggaaaatcttggcattaaggacttcatc
cggatcgaactaagcacgtctactcgggtggttttctccttcgatgttggtaacggccca
ctggaagttaaagtcgagtcgacggtcccgttgaatgacaaccgatggcatcgagtccga
gccgagcggaacatcaaggaggcgtcgctgcgactggacgacctgcctgtggcgacgcag
gaggcgccggctgacggacacgtccacctgcagctcaacagccagctgttcattggaggc
acggcgtccaggcagaggggtttcagaggctgcatccgcgctctgcagctgaacggtgtt
actctggacctggaggaaagggcagagatgacgcctggcgttcggcccggctgcccgggt
cactgcagcagctacggctcattgtgccagaaccagggccgctgtgtggagagagctgct
gggttccattgcgactgcagcctgtcggcttacactggagtcttctgccagactgagctg
tcagccagtttcaaacctggaacgtcggtcagatacaccttcaaggagccgtatgagttg
actagaaacagcagcgctctgccgtcctccatctactccgacacaacgctgagaggagaa
aatgtctccatgagtttcaggacggctcagagtccggctctgctgctttacgtcggctct
tactacagagagtacatggccgtgctcatcaacaagcacgataagctggaggtgagatac
aagctggagggcaaccgagacgctgaagtgttgaggagcagcagcacgaggaacctggcc
aatggacagctgcacagcgttaccatcaggagactgacacacacggtgtctgtgcaggtt
gaccaaaatgccagagaagacttcaacctcacgtctgacggagagtttaatgccatcaag
tcgctggtgttgggcaaagtgcatgagtctggtgatttggactctcatctggtacggcta
gcgtctctgggtttcaccggctgcctgtcagtagttcagttcaactccatcaatcctctg
aaagctgctctgctccacccagacaccagccccatcatcatcaccggacctttggttcgg
tccaactgtggctctgcagcctcagccaatccctatgcagctgaaaacattcaccatata
tcagaccggtccggctcagtgggctcaggtcaacctttagtcaatgccatcaggaccgac
tcggctctgattggaggtatcatagcggtcgtcatcttcgtggttctgaccggtttggcc
gtcgccgcgcggtacctctaccggaggaaggacacgtatcgaaaccaggaggggaacgca
gtcaaacaggaagacagtccagatttccctttcaacaaccagactgactcccagaacctg
tcctctgaaaacccaacggagtattttatctaa
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