Xiphophorus couchianus (Monterrey platyfish): 114146558
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Entry
114146558 CDS
T05908
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114146558
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
114146558
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-Di19
Homeodomain
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
114146558
NCBI-ProteinID:
XP_027876537
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Position
6:24927644..24991397
Genome browser
AA seq
1111 aa
AA seq
DB search
MADGPRCKRRKQANPRRSSVTNFNNSLEASSDSDDEDKLHIVEEDSLLENDATETDGATA
LENHDAAITVLPHNGSWNGVKEECVSEEEEDEEVKDTLVDEILQQSDTAIIYPEAPEDEQ
SPAETGDADENGTSDSFSHSHICPYCSRGYKRNASLKEHIKYRHETSEDNYSCSQCSYTF
TYRSQLERHMSHHRGNKEQRHVSQSTAGSGGTGGTRKFKCTECSKAFKYKHHLKEHLRIH
SGEKPYECSNCKKRFSHSGSYSSHISSKKCVGAATQNSVTVTVVKTTSPNTQTKPVAIAP
ARLPVKEKTESKPLQEQLPVTQIKSEPVEYECKPVMAPPATSTGSNGVVNGGAAPPAAAA
PVAAIPQSVAMVVPTVGLMSPVSINLNDLQSVLKVAMDGNVLRQVLGSANGVVAQGKQGI
VVQQPQQQIISLPAFVDHDGTTKIIINYSISPAAGTNAAAAALPTPLVIKNNLPPAPVVT
TTAAAAPTATKTDQLETSEVTDLSLKKNPVAEPIKVTKTEATAEETMKESEPAKAPKSSS
SSTCLLCDDCPDNLEALHLLQHRKAANGEAVDSAALDPSFAALLSEAGVMLEEPPVEDLL
SLLKTYFASNANPGEEELTKISKSVNIPMEVVKKWFIKMNSGKNTSKCHTESSDPLEETK
TTNSSSEETLNNDENGSQEECDRPQSRVSSPSDSLSLSGDLVIVKSEPEDPEDADSQAEP
LDLSLPKHEIPPSEKKATPPPKQQEHPLNLTCLRKDGQTLFVTTSQSTNPVNIVTAAQLP
TLVAIAGQGTVGCLGTINTTTKRTILIPQLTYTYAAATGNAAGAKTVVLNGHKEKRSESN
TDGASSPEEQDSKKRRVENGVYPCDLCSKVFQKGSSLLRHKYEHTGKRPHECTICNKAFK
HKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKDWSILGSGVGSRRG
QLELGSPGGGTLSDSRTTTPQSQMDSDERESEDEDDEAMCVDDIRVVQVDDGECEIYEGN
FDDDEEEEEEEEETEAGQAQGEGQDFFCDVVEVELENEHAENGTSEGKREEKEEPAGAAA
EKQADCEAETDKVMKEESDSTEESQEAAKTK
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaggaggagcagcgta
acaaacttcaacaatagcttggaggccagttcagactcagacgatgaggacaagctacat
attgtggaggaggacagcctgttggagaatgatgccacggaaacggacggggccacagcg
ctggagaaccatgatgccgccataacagtattaccccacaatggctcctggaatggagtg
aaggaggagtgtgtgtcagaggaggaggaggacgaggaggtgaaggacactctagtggac
gagattctccagcagagcgacaccgccatcatttatcctgaagctccagaggacgagcag
agtccggctgagacaggagacgctgatgaaaacggcacatccgacagcttctcccactcg
cacatttgcccgtactgttctcggggctacaaacgcaatgcctcgctgaaggaacacatt
aagtaccgccacgagaccagcgaggacaactacagctgctcgcagtgcagctacaccttc
acctaccgctcgcagctggagaggcacatgagccaccaccgaggcaacaaggagcagcgt
cacgtttcccagtccacagcaggatcaggaggtacaggtggaacccgcaagttcaagtgt
accgaatgttcaaaggccttcaaatataaacaccacctaaaggaacacctgcgcattcac
agcggtgagaagccatatgaatgctcaaattgcaaaaagcgattctcccactctggctcc
tacagctcccacatcagtagcaagaagtgtgtgggagcagcaactcagaacagtgtgact
gtaacggtggtgaagaccacgtctccaaacactcagactaaacctgttgcaatcgctccg
gcacgacttcctgtcaaagaaaagactgaaagcaaaccgctccaggagcagctgcccgtc
acccagatcaaatccgaacctgtggaatacgagtgcaagccggtcatggcgccgccggcg
acttcgaccggcagcaatggagtggtgaacggcggggcagcgccaccagcagcagcagcc
ccagtggcagccatccctcagagcgtagccatggtcgtcccaacggtgggcctcatgtcg
ccggtcagcatcaatctgaacgacctgcagagcgtgctgaaggtggcgatggacggaaac
gtgctcaggcaggtgctgggctcagccaacggcgttgtggcgcaggggaagcagggaatc
gtagtccagcagcctcagcagcagatcatcagcctccccgccttcgtggatcacgacggc
accacaaagattatcatcaactacagcatcagccctgcagccggcaccaacgccgccgcc
gccgccctgcccacgccgctcgtcatcaaaaacaaccttccccctgctcccgttgtcact
accactgccgctgccgcaccgaccgcaacaaaaacggatcagctcgaaacgtccgaggta
acggacctcagtctgaagaaaaatccagtagcagaacccattaaagtcacaaagacggaa
gcaacagcagaagaaaccatgaaggagtcggaaccagctaaagcacccaaatccagcagc
agcagtacgtgtttactgtgcgacgactgtcctgataacctggaggcgctgcatctcctg
cagcatcgcaaagctgccaacggggaggccgtggactcagccgcattggacccgtcgttt
gcagctctgctaagtgaggccggcgtgatgctggaggagccgccagtggaagacctcctc
tcgctcctcaagacttacttcgcctccaacgccaaccccggtgaagaggagctgacgaag
atctccaagtctgtcaatattcccatggaagtggtcaagaagtggttcatcaagatgaat
tctgggaaaaacacgagtaaatgtcacactgagtcgtcagatcctctagaagagactaaa
accacaaactccagctcagaggagactttgaataacgatgaaaatggcagccaggaggaa
tgtgacagacctcagtcccgtgtcagctcgccgtcagactcgctgtctctcagcggggat
ctggtgattgtcaaaagcgagccagaagacccagaggacgcagactcgcaagcagaacct
ctggacctgtctcttcccaaacatgagatcccaccatcagaaaagaaagccacgcctccc
ccaaagcagcaggagcatcctctgaacttgacctgcctgaggaaggacggccagacgctc
ttcgtcaccacgtctcagagcaccaaccccgtcaacatcgtcaccgccgcccagctgccc
acactagtggccatcgccggtcaggggacggtgggctgcctcggcaccatcaacaccacc
acaaaacgcaccatcctcatcccccagctcacctacacctacgcagccgccaccggcaac
gccgccggagccaagactgtcgtcctcaacggtcataaggagaaacgttcagagagcaac
actgacggggcttcctctccagaggagcaggacagcaagaagcggcgggtggaaaatggc
gtctatccctgtgatctttgctccaaggtcttccagaagggcagttcgctgctcagacac
aaatatgaacacacaggaaaacggccccatgaatgcaccatttgcaataaagctttcaaa
cacaagcatcacctgatcgaacactccaggctgcactccggcgagaaaccctaccagtgc
gacaaatgtgggaagcgcttctcccattcgggctcgtactcgcagcacatgaaccaccgc
tactcctactgcaagaaggactggtccatcctgggctccggcgtggggtcacgcaggggt
cagttggagctgggcagccccggcggcggcacgctgtcggacagccggaccactacgccg
cagtcccaaatggactcggacgagcgggagagcgaggacgaggacgacgaggccatgtgt
gtggacgacatccgggtggtgcaggtggacgacggcgagtgcgagatctacgaaggcaac
ttcgacgatgacgaggaagaggaggaggaggaagaagagacggaggctgggcaggcgcag
ggggagggacaggattttttttgcgacgtggtggaagtggagctggagaacgaacacgcg
gagaacggcacttcggaggggaaacgcgaagaaaaggaggaaccggcgggcgcagcagcg
gagaaacaggcggactgcgaagcagaaacagacaaagtcatgaaggaggaatcggacagc
actgaggagtcacaggaagctgcgaaaacgaaatga
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