Xiphophorus couchianus (Monterrey platyfish): 114146608
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Entry
114146608 CDS
T05908
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114146608
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
114146608
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
114146608
NCBI-ProteinID:
XP_027876649
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All DBs
Position
6:complement(10317337..10331637)
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AA seq
523 aa
AA seq
DB search
MDGDVAVGVKRGSDELNMYSSSPNSMTANGSDSKKQRLDESPPSRVLHIRKLPNEVTETE
VIALGLPFGKVTNILMLKGKNQAFLELGTEEAAITMVNYYTAVTPQVRNTPVFIQYSNHK
ELKTDSALNQRAQAVLQAVSAVQDGSSPSSDQGVLELAPPPSPVLRIIIDNMFYPVTLDV
LQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSK
LVNLNVKYNNDKSRDYTRPDLPTGDGESTNKDHSLLGTPSGALASYSSGGGYSSSLSLSQ
GGGAISPLSAAAAAAAAAGRVALSGSGVSGVLLASNLNEEMVTPQSLFTLFGVYGDVQRV
KILYNKKDSALIQLSDGNQAQLAMSHLNGQKVFGKVMRVTLSKHQTVALPREGLDDQLLT
KDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIRDGVGEDDLRRLFSNSGGTVKAFKFF
QDRKMALIQMSSVEEAIQALIDLHNYDMGGNHHLKVSFSKSTI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatgttgcagttggtgtgaagagaggctcagatgagctgaacatgtatagt
agcagccccaactcaatgacagcaaacggtagtgacagtaagaaacagcgcctagacgag
tcccctccctccagagtgctccacatccgaaaacttcccaacgaagtgacagagacagag
gtcattgctctcggcctgccctttggaaaggtcaccaacattctgatgctgaagggaaaa
aaccaggcatttctagagttgggtacagaggaagcagccatcactatggtgaactactac
acagctgtaacaccacaggtcagaaatactcctgtcttcatccaatattctaaccataaa
gaactgaaaacagattcagctctgaaccagagagcccaggcagtcctgcaggcggtatca
gctgtccaggatggcagctctccatcctctgaccagggcgtattggagctcgctccgccc
cccagccctgtgctgcgaattattatcgacaacatgttttatcctgtaacactggatgtt
ttacaacagattttcagcaagtttgggacagttatgaagattataaccttcactaagaac
aaccagtttcaggctcttctgcagttcagtgacccagtcaatgctcaacaagctaaactg
tcgttggatggacagaacatctataattcgtgctgcactctgcggatagacttcagtaaa
ctggtcaacctcaatgttaaatacaacaatgataaaagtcgtgattacaccagacccgac
cttccgacaggagatggagagtcaaccaacaaggatcattctttactgggtaccccatct
ggagctctagcttcctactctagtggaggaggttactcatcatctctctccctctcacag
ggtggaggagccatcagtcccctgagcgctgcagcggcggcggcagctgcggcaggtcgc
gtcgctctctctggatccggagtgtcaggtgtcctgttggcgtccaacctgaatgaagag
atggtcacgcctcaaagtctctttaccctcttcggcgtctatggtgatgtccagagggtg
aagatcctctacaacaaaaaggacagcgctctgattcagctttctgatggcaaccaggct
caacttgcaatgagccacctgaatggtcagaaggtgtttggtaaagtgatgagagtgact
ctgtcgaaacatcagacggtagctttgcccagagaaggactggacgaccagttactcacc
aaagatttttctggctcccccctccatcgctttaagaaaccaggatctaaaaacttccag
aacatctttcctccatctgcaacacttcacctctccaacatcagggatggagtcggagag
gacgatctacgccgcctgttttccaacagcggaggaaccgtcaaggcctttaagtttttt
caggaccgtaagatggcgttgatccagatgtcgtcagtggaggaggcgattcaggctctg
attgaccttcacaactatgacatgggaggaaatcaccatcttaaagtttccttttcaaag
tccaccatctaa
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