Xiphophorus couchianus (Monterrey platyfish): 114147026
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Entry
114147026 CDS
T05908
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xco03032
]
114147026 (pif1)
03029 Mitochondrial biogenesis [BR:
xco03029
]
114147026 (pif1)
Enzymes [BR:
xco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
114147026 (pif1)
DNA replication proteins [BR:
xco03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
114147026 (pif1)
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
114147026 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
AAA_30
Pif1_2B_dom
AAA_19
AAA_22
DEAD
UvrD_C_2
Herpes_Helicase
Mg_chelatase
RsgA_GTPase
AAA_7
AAA_16
PhoH
AAA_5
ABC_tran
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
114147026
NCBI-ProteinID:
XP_027877356
LinkDB
All DBs
Position
6:2666863..2679034
Genome browser
AA seq
629 aa
AA seq
DB search
MLAGEDGAQLQCCVAVEKLDSCGQATRRQLIRKASVILGRNEFQELILRVHDGKLSHSYL
LKEFRLFTKFASDGKCTVKLLPENTQVLLSNCPPDRLKLFLKTLGVKHQVWQSGKPLTDR
EKLQAGLPRSFEAISPLQQKDIQKVNELRSRAAPSGLTDRINKGPAAGTGQQVKRSRSDA
SCSPVKGNPSKRSILSLPIRKLSKEQAAVLNAVLSGKNVFFTGSAGTGKSFLLKRILGSL
PPKSTFATASTGVAACHIGGTTLHSFAGIGSGSAPLEQCVELAQRPAVLQHWTSCRHLII
DEVSMVEAQFFDKLESIARSVRRSTQPFGGIQLIVCGDFLQLPPVPKGKEKASFCFQARS
WRKVIQVNMELTEVRRQTDQNFISLLQAVRVGRVSEEVTATLLKSAYHQIERDGILATRL
CTHKDDVELTNQNKLQQLPGSSRAFEALDSDPELVRTIDAHSPVSRLIQLKVGAQVMLTK
NLDVARGLVNGARGVVLSFDSGKQGFPCVRFLCGITEVLKPERWVFKSAGGIHLSRQQLP
LKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDPHVVRADP
DVLLFYKKLRKERLLMQASMDDFYNKENA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgctagccggagaggatggcgctcagctgcagtgctgtgtagcggtggagaagctggac
agctgcggccaggccacccggagacagctcatccgcaaagcctccgttatcctgggccgc
aacgagttccaggagctcatcctgcgtgtgcacgacgggaaactatcccacagttacctc
ctgaaagagttcaggctcttcaccaagttcgccagcgatgggaaatgcaccgtcaaactg
ctccccgaaaacacccaggtgcttctctccaactgccctcccgaccgcctgaagctgttc
ctgaaaacactcggcgtcaagcaccaggtctggcagagcggcaagcctctgaccgaccga
gaaaagctgcaggccggcctgccccgcagcttcgaggccatcagccctctgcagcagaaa
gacatccagaaggtgaatgagctgcggagcagagcggctccctccggcctgacagaccgc
atcaacaaggggccagctgcgggtacaggtcagcaggtcaaacggtcccgaagtgatgcc
agctgcagcccggtgaagggaaaccccagtaagagatccatcttgtctctcccgatacgg
aagctcagcaaagagcaggctgctgttctcaatgcggtgctgagcggcaagaacgtcttc
ttcactggaagtgctggtacggggaaatccttcctgctgaagagaatcctgggatctctc
ccaccgaagagcacctttgctacggccagcacaggagtggctgcgtgtcacattggagga
acaacactgcacagcttcgctggtattggctcaggctccgcccccttggagcagtgtgtg
gagctggcccagcggcccgctgtgctgcagcactggaccagctgtcgccacctcatcatt
gatgaggtctccatggtggaggcccagttctttgacaagctggagtccatagccaggtcg
gtgagaagatccacacagccgtttggaggcatccagctcatcgtttgtggggatttcctc
cagctacctccagttcctaaaggaaaggaaaaggccagcttctgcttccaggccaggagt
tggaggaaggtcatccaggtcaacatggagctaacagaagtgaggaggcaaaccgaccag
aacttcatctccctcctgcaggcagtgagggtgggcagggtgtcggaggaagtcacagcc
acgctgctgaagagcgcctaccatcagatagagcgggatgggattctggccaccaggctg
tgtacgcacaaggacgacgtggagctcaccaatcagaacaaactccagcagctgccaggg
tcgtcgcgggcgtttgaagctctagacagcgacccagagctggtgaggaccatagatgct
cacagcccagtcagcaggctgatccagctaaaagtgggagcccaggtcatgctgaccaaa
aacctggatgtagctcgaggtctggtgaacggcgccaggggagtggtgctctcattcgac
tcaggaaaacaaggattcccatgcgtgcgcttcctgtgtgggatcacggaggtgctgaag
ccggagcgctgggtgtttaaatccgccggtgggatccatttgagccgacagcagctgccg
ctgaaactggcctgggccatttccatccacaagagccagggaatgactctggactgcgtg
gagatctccctggctcgggtgtttgagagcggccaggcctacgtggctctgtctcgagct
cgaagccttgagggcctcagggtcatggactttgacccccacgttgtccgggcggatcca
gatgttctcctcttctacaagaagctgaggaaggagcggctgctcatgcaggcctccatg
gatgatttctacaataaagaaaatgcttga
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