Xiphophorus couchianus (Monterrey platyfish): 114147062
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Entry
114147062 CDS
T05908
Symbol
aire
Name
(RefSeq) autoimmune regulator
KO
K10603
autoimmune regulator
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114147062 (aire)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114147062 (aire)
04121 Ubiquitin system [BR:
xco04121
]
114147062 (aire)
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
114147062 (aire)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114147062 (aire)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSR
PHD
PHD-1st_NSD
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
114147062
NCBI-ProteinID:
XP_027877399
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All DBs
Position
6:complement(14392516..14397174)
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AA seq
500 aa
AA seq
DB search
MSRVEVFRDANLRSLLRELRTDIAMAVDDPFPIVYGLADKNIITEQQLQDTLKKEGSEGI
HKAMYSLLSWLLEQSRSTLQAFWSNLSKDYNMDSYPKLKALLANLNTRPDAPRSKAENKS
YGGVKASHSKKRSHEDKGANVQHSEYHAKTSDGTVSKVKLYRVKSEARALQLPSGNTLQV
VSSSVQRGVALSSSSSSSSSDLPFSQDKKENTQIKQERTALDGSVRKCIKGAEGFHSYSL
AEKSHEKSKSASARFTHQGEANPIIIHSNDDECALCKDGGELICCDGCPRAFHLTCLNPP
LTSIPSGSWQCEWCYGLRVKQENALQLVQVLPTQPQQTSINNTNSILDNSFYPTLSSSVT
SVTASIKASNGKNQCSGGEMVALREVCGVCHLGGDLTHCLQCLKHFHAHCHFSKGRSVCL
SCSRPWGSSAEKETEPRGMQLAPSVQNSFSQDQSTSFSEPVVNKDELDSILEDQNSIDGL
LQWAFHNISRPFPDSQGCYK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagtggaggtgtttagggacgccaaccttcgctctctgctgcgcgagttgcgt
actgacatagcgatggcggtggatgacccttttcctattgtgtatggcttggcagacaaa
aacataatcacagaacaacagctgcaggatactcttaagaaggaagggagcgaggggatt
cacaaagccatgtactccctcctttcgtggctgttggagcagagcagatcaactctccag
gctttctggagcaacctatccaaggactacaacatggacagctaccccaagctaaaggca
cttctcgctaacctgaataccagaccggatgctccgcggtccaaagctgaaaacaaatct
tatggaggagttaaagcttctcacagcaagaagaggagccatgaagacaagggagcaaat
gttcagcattcagagtatcatgctaagacaagcgatggaacagtgagtaaagtcaagttg
tacagagtgaagagtgaagcgcgagcactgcaactaccatctggaaacactctgcaggtg
gtatcttcctctgttcagagaggcgtagccctttcctcttcttcatcttcctcctcttca
gatcttcctttcagccaggacaaaaaagaaaacacacaaatcaaacaggagcgtactgca
ctggatggctccgtcagaaagtgcatcaaaggtgctgaaggttttcactcgtacagttta
gcagagaagtcccacgaaaagtccaaatctgcgagtgccaggtttacccaccagggggag
gcaaacccaataataatacactctaatgatgatgagtgtgcgctgtgtaaggatggaggg
gagttgatttgctgtgacggctgtcctcgagcctttcatctgacctgcctcaacccccca
ctcacttccataccgagtggctcttggcagtgtgagtggtgctatgggcttagagtgaaa
caagaaaatgctctacagcttgtccaggttctccccactcagcctcagcaaaccagcata
aacaacactaactccatcttagacaactctttctaccccactttatcatcctccgtcacg
agtgtcacagcctctatcaaagcatcgaatggcaaaaaccagtgctcaggcggagagatg
gtcgccctgagggaggtgtgtggtgtttgtcaccttgggggagatctgactcactgcctt
cagtgtttaaagcattttcatgcacattgccacttttccaagggaagatctgtctgcttg
tcctgttctagaccatggggcagctctgcagagaaagaaaccgagcccagaggcatgcag
cttgcaccttcagtccagaactcattcagtcaagatcagagcacttccttctctgaacca
gtcgtcaataaggacgaactggactccatcttggaagatcagaactcaattgacggcctg
ttgcagtgggccttccacaacatctccaggccttttccagactctcagggatgctacaag
tga
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