KEGG   Xiphophorus couchianus (Monterrey platyfish): 114147064
Entry
114147064         CDS       T05908                                 
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04115  p53 signaling pathway
xco04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    114147064 (cop1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    114147064 (cop1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xco04121]
    114147064 (cop1)
Enzymes [BR:xco01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     114147064 (cop1)
Ubiquitin system [BR:xco04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    114147064 (cop1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     114147064 (cop1)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_RIG_2nd zf-C3HC4_2 EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd zf-RING_2 Beta-prop_EML Beta-prop_DCAF4 zf-RING_UBOX zf-C3HC4_4 Beta-prop_WDR90_POC16_2nd zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 WD40_RFWD3 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 zf-rbx1 WDR90_beta-prop_4th zf-RING_10 Beta-prop_SPT8 UvrD-helicase zf_C2H2_10 Sina_RING
Other DBs
NCBI-GeneID: 114147064
NCBI-ProteinID: XP_027877400
LinkDB
Position
6:complement(9023683..9037116)
AA seq 694 aa
MSGSRPQQSAGGASSVPGTSSSSSSSSSTGGSGSNAVTSNGPATGNAVPSRTLGATNEAG
SFASLTSRPSASSGSRKKSLHQAPLYNGLLNSYEDKSNDFVCPICFEMIEEAHMTKCGHS
FCFKCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLVNELILKQKQRSEEKRLKLDHPNWPR
WQVFQDILSPDQENLDLANVNLMLELLVQKKKQLEAESQAAQRQILMEFLKEARRNKREQ
LDQLQKELNFLEEDIKRVEDVSGISSPTMEAECTVPNVEAPSPAPSSIIEPPDYNQTPGF
GATTPVKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNKMSRITDEGRNLNQLEDFMECLS
KFTRYNTVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDA
VDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCW
SVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPTSRYHLAFGCAD
HCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKPHCLRSFK
GHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKEDDTN
EFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq 2085 nt   +upstreamnt  +downstreamnt
atgtctggcagccggccgcagcagagcgctggtggggcaagttcagtgcctggcaccagc
agtagtagcagcagcagcagcagcactggaggcagtggaagcaatgccgttacgagcaat
gggcccgctactgggaatgctgtgccgtcccggactctgggtgcaacaaacgaggcaggc
agcttcgcttccctaacaagcagaccttcagcgtcctcaggcagcagaaagaagtccctc
catcaggcacctctatacaacggcctcttgaactcatacgaagataaaagcaacgacttt
gtgtgtccaatttgcttcgaaatgatagaggaggctcacatgacaaagtgtggacacagt
ttttgtttcaaatgtattcgtcagagcttggaagacagcaacagatgtcccaagtgtaac
tatattgttgataatgtggatcagctgtaccctaactttcttgtaaatgaactgatcctt
aaacagaaacaaaggtctgaggaaaaaagactaaagttagatcatcctaactggccgcgg
tggcaggtcttccaggatattctgagtcctgatcaagaaaacttggacctcgcaaatgtc
aatctgatgttggagcttttggttcagaagaaaaagcagctggaggcagaatcccaagca
gctcagaggcagatcctcatggagtttcttaaggaagcaagaagaaacaagagagagcaa
ctagatcagctacagaaagagctaaacttccttgaagaagacattaagcgtgttgaggat
gtaagtgggatttcctccccgacgatggaggcagagtgcacagtgcctaatgttgaggct
ccttctccagcccccagcagtatcattgaacctccagattacaaccaaacgccaggattt
ggtgcaacaactccagtgaagcgacagacttggtataacagcacactggcatctagaaga
aagaggctgactgctcattttgaggatctggagcagtgctacttctccaacaaaatgtca
cgcatcacagatgagggcagaaacctgaatcagctggaggattttatggagtgtttgtcc
aaattcactcgctacaacactgtgcggccgctggccaccctctcctacgccagtgacctc
tataacggctccagtattgtctctagtattgagtttgaccgtgactgtgactatttcgcc
atcgctggtgtgaccaaaaagatcaaggtttttgagtatggaactgtgatccaggatgca
gtggacatccactatcccgtcaatgaaatgacctgcaattccaaaatcagctgtatcagc
tggagcagttatcacaagaaccttctggccagcagcgactatgagggcaccgtcattttg
tgggacggattcaccggccagaggtccaaagtctaccaggaacatgaaaaaagatgctgg
agtgtcgacttcaatctgatggaccccaagcttttagcctccggttctgatgacgctaaa
gtaaagttgtggtcaaccaatcttgacaactctgtggctagcatcgaggctaaagctaac
gtgtgctgtgttaaattcagtccaacctcccgatatcacctggccttcggctgtgcagat
cactgtgtgcattactatgatctacgcaacactaagcagccaatcatggtgtttaaaggc
cacaggaaagcagtgtcctatgccaagtttgtaaatggagaggagatagtttctgcgtcg
acagacagtcagctgaagttatggaatgtcaacaaacctcactgcctgcgctccttcaag
ggtcacatcaacgagaagaactttgttggcttggcatccaatggagactatgttgcctgt
ggcagcgaaaacaactctttgtatctgtactacaaaggactttccaagacgctgttaaca
ttcaagtttgacacagttaagagcgtcctggacaaggacaagaaggaagacgacaccaat
gagtttgtcagtgccgtctgctggagggcgctgccagatggagaatcaaatgttctaatt
gctgcaaacagccaaggaacaatcaaggtgcttgagctcgtctga

DBGET integrated database retrieval system