KEGG   Xiphophorus couchianus (Monterrey platyfish): 114147124
Entry
114147124         CDS       T05908                                 
Symbol
wdr48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    114147124 (wdr48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xco03400]
    114147124 (wdr48)
DNA repair and recombination proteins [BR:xco03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     114147124 (wdr48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_DCAF4 WD_LRWD1 Beta-prop_Vps41 Beta-prop_IP5PC_F WDR54 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 RAWUL WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 114147124
NCBI-ProteinID: XP_027877483
LinkDB
Position
6:complement(8801098..8812322)
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVY
QQKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVSTTKSSVNKWSLKGMHNFRSSGEYDNDCTTPLTPLCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKGEDLGKVEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWPRTRIN
PMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSANDKPGEQEKEEDMAMLAEEKIELMCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggccacgcatcacaggcaaaatgctgctgggcggaggaaagtacaggtttcctatgtg
attagagacgaggtggagaagtacaatcgcaatggagtgaatgctctccagttagaccct
gctctgaaccggctcttcaccgcggggagagactcgatcatccgaatatggagcgtctac
caacaaaaacaggacccatatattgcatctatggagcaccacactgactgggttaatgat
atagttctttgctgcaatggaaaaacattgatatcagcttcatcagatactacggtgaaa
gtgtggaatgctcataaaggattttgcatgtcgacgttacggacgcacaaggactacgta
aaagctttagcgtacgctaaggacaaggaacttgtggcgtccgccggtctggaccggcag
atcttcctgtgggatgtgaacacactgacggcgctcacagcctccaacaacacggtcacc
acttcgtcgctgagtgggaacaaggactccatctatagtctggctatgaaccagatggga
acagttatagtctccggctctactgaaaaggttttgagagtgtgggaccctcgaacgtgt
gcaaagcttatgaagctaaaaggtcacacagacaacgtcaagtcgttgctcctgaatcgc
gatggcactcagtgcctgtcggggagctcggacgggaccatccgcttgtggtcactcggc
cagcagaggtgcatcgccacgtacagggtacacgacgaaggcgtctgggccctgcaggtc
aacgaggccttcacacacgtatactctggaggcagggacaagaagatttactgcacggac
ctgagaaacccggacatccgtgtgctcatctgcgaggaaaaggctccggtgctcaaaatg
gagctggacagatctgctgacccacctccagcgatctgggtttccaccaccaagtcatct
gtgaataaatggtctctaaagggaatgcacaacttcagatcatcaggggagtacgataac
gactgcaccacccctctgactccactgtgcactcaaccagaacaagttattaagggaggt
gccagtattatacagtgccacattttgaacgacaagagacacatactcaccaaagacacc
aacaacaatgtggcatactgggatgtgctcaaggcttgcaaaggagaagacttgggcaaa
gtggaatttgatgaggagattaaaaagcgattcaagatggtgtacgtgccaaactggttc
tctgttgatctgaaaaccggaatgctcacaattactctggatgagagcgattgctttgct
gcttgggtgtctgcaaaggacgctgggttttcaagttctgatggatctgatccgaagttg
aacttgggcggcttgttgctccaagctctgctggagttctggcccagaacgcgcatcaac
cccatggacgaggaagaaaacgaggtgaaccacgtgaacggcgagcaggagaacagggtg
cagaaaggaaacggatattttcaggtcccgcctcacacgcccgtcatcttcggagaagca
ggaggaagaactctatttaggctgctatgtagggattcaggcggcgagactgaatccatg
ctgctgaatgagacagtcccacagtgggtcattgatataacagtagataaaaatatgcct
aaattcaacaaaatcccattctacctccagccccattcttcttctggtgcaaaaactcta
aaaaaggatcgtctctcggccagcgatatgctccaggtgaggaaggtgatggagcacgtt
tacgagaagatcataaacctggacaacgagtcgcagaccaccagctcctcggccaacgat
aaacccggagagcaggagaaggaagaagacatggcgatgctcgccgaggagaagattgag
ctaatgtgtcaagaccaggttctagaccccaacatggacctgcggacagttaaacatttt
atctggaagagtggaggggacttgacacttcactataggcagaagtcgacatga

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