Xiphophorus couchianus (Monterrey platyfish): 114147160
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Entry
114147160 CDS
T05908
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xco01009
]
114147160 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114147160 (rpap2)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
114147160 (rpap2)
Protein phosphatases and associated proteins [BR:
xco01009
]
HAD phosphatases
Fcp/Scp phosphatases
114147160 (rpap2)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
114147160 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
S-antigen
Motif
Other DBs
NCBI-GeneID:
114147160
NCBI-ProteinID:
XP_027877536
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Position
6:complement(2953408..2963493)
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AA seq
579 aa
AA seq
DB search
METEERRRRGGSAKSSKKGGKCVKVRTAEEEARRREEVKERLREKLELERRALKVVERLL
EDSVAEDFLIDCAKLITPANYKDTVEERFIAKLCGYPVCPNKLGKIPNQRFKISTKTNRV
YDITERKCFCSNFCYKASKHYELQISKTPLWLRQHESPPEVRLLKKGDGGSSGEEVLLSE
RCLKEEDIEDPLAAPPQDPPGSERSAAGSDLSQSSDSEQEQDFVSSVVPHRRKVQVSWAD
LPKHTDGDGKQSEQRHIDDPEEAGRAGGDDASPENRPVEEATAKLNECSVSERVHPNSDL
LEAGSKQAPNLAALSITQVGMSQRGAAGLRDLLNTHTGEANPDTVRLNLLACLKRTLKEW
CTDDTLSFLYGADHSLGSPFSNVKETQKEELDEDDLEDDDVTEPGAEEQDRGQSAAAPDY
KTLWKETDRLQLRVTEFYRGTWILPEEGITPSKETESKDPVLPLIDSQAQNLIQKRITVE
KLSSCLRNIVGPVGLTMSDLSTDLNNLVRTFRFSNTNIIHKTPEWTLIAVVLLHLLSFVS
PVVRDALEVSASVQYLNSLMEELGLQQHDLLSLVELFKT
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaagagaggaggaggagaggaggttctgctaaaagctccaaaaaaggtggg
aaatgcgtcaaagtacggaccgctgaagaagaagcgaggaggagagaggaggtgaaggag
aggctgagggagaagctggagctggagaggagagccctgaaggtagtggagcgcctccta
gaggacagcgtggctgaagacttcctgattgactgtgccaagctcataactcctgctaac
tacaaagacactgtggaggagagattcattgccaaactctgtggttatcctgtatgtcca
aacaaactgggcaagatcccaaaccaacggtttaaaatatctaccaaaacaaaccgggtt
tatgacatcacagagcggaagtgtttttgcagcaacttctgctacaaagcttccaaacac
tatgagctgcagatatcgaagacgcctctttggctcaggcagcatgaaagtcccccagag
gtgaggttgctgaagaaaggagatggtgggagctctggtgaggaggtgctgctgtccgag
aggtgcctcaaagaggaggacatcgaggaccccctggctgccccgcctcaggaccctcct
ggctctgagcgcagcgccgcaggaagtgacctcagtcaaagcagcgacagcgaacaggag
caggacttcgtctccagcgtggtcccccaccgccggaaagtccaggtgagctgggctgac
ctgcccaaacacacagacggagacgggaagcagagcgagcagcgacatatcgacgaccca
gaggaggcggggagagcaggaggagatgatgcgtctcctgagaacagacctgtggaggag
gccacagcaaagctgaacgagtgtagcgtgtcagagagagtccatcccaactctgacctg
ctggaagctggaagcaaacaggctccaaacctggcggctctcagcatcacccaggtgggg
atgagccagagaggagcagctgggctgcgggatctcctgaacacccacactggagaagcc
aatcctgacacggtgcggctcaatctgctggcgtgcctgaagaggacgctaaaggagtgg
tgcacagacgacacgctgagcttcctgtacggagccgaccattctctgggatccccattc
tccaacgtaaaggaaacgcagaaagaggagctggacgaagatgacctcgaggacgacgac
gtgacggagccaggcgccgaagagcaggacagggggcagtcggctgcagctccggactac
aagacgctgtggaaggagactgaccggctgcagctcagagtcacagagttttacagaggg
acgtggattctgcctgaggaggggataacgcccagcaaggagacagaatcaaaggatcca
gttttgccgctgattgattcccaggctcagaacctcatccagaaacggattacagtggag
aaactcagcagctgtctcaggaacatcgtaggtccggtgggcctcaccatgagtgacctc
tccacggacctgaacaacctggtcaggactttcaggttcagcaacaccaacatcatccac
aaaaccccagagtggacgctgatagccgtggtgcttctgcatctgctgtccttcgtgtct
ccggtggtgcgggacgccctggaggtgtcggcatcagtgcagtatttgaactctctgatg
gaggagctcggcctgcagcagcacgaccttctcagcctggttgagctctttaaaacctga
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