Xiphophorus couchianus (Monterrey platyfish): 114147506
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Entry
114147506 CDS
T05908
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114147506
04121 Ubiquitin system [BR:
xco04121
]
114147506
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
114147506
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
114147506
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
hAT-like_RNase-H
HP1454-like_C
Motif
Other DBs
NCBI-GeneID:
114147506
NCBI-ProteinID:
XP_027877762
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Position
7:24263770..24267077
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AA seq
438 aa
AA seq
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MIVKDTQPFTIVDDVGFRTFVSKLDPNYVLPTRQALKAMVEAKYESAKEHTKAKVEKVAA
VSLTSDMWTSINMDAYLAVTCHFVEENEKLSLVLLGVQTFPQSHTAENIACVKASLMEEW
GISGKVTCMVTDGAPNMVACVRELKLHHHICVAHTLNLVVKRALDQHPVLSGLRAKARKL
VGYFRSSTTTKVCSFLLFQYIMLIVCLYSYCSDLMAYSSVSLKEKLTQVQLQLGMQATKL
MQEAETRWNSTYLMLQCLVELREPVGAALAGLHTDIPFFTASEFDIVVACLSLLSPFYDA
TTELSAEEDGDKVIPLLKMIEKALQEEDTKSAPAVAVEIGEQLIRQLREKLHMLQSMSIL
SLATLLDPRFKLIAFFSNTKAAEAVKRLTSECATIIRRNTEENTHEIPQASTSQEFTGGA
QASEESFSLNTLQRKRQR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgaaggatacccagcctttcactattgtggatgacgttggattcaggacattt
gtgtctaagctggatcccaattatgttctccctacaaggcaggctctgaaggccatggtg
gaggccaaatatgagtctgctaaggagcacactaaggctaaagtagagaaggtggctgct
gttagccttacatcagatatgtggacatccatcaacatggatgcctacctggcagtgaca
tgccactttgtggaggagaacgaaaagctgagcttggtgttgttgggagtgcagacattc
ccccagtctcacactgctgaaaatattgcttgtgtgaaagcctccctgatggaggaatgg
ggaatctcaggcaaggtgacatgcatggtcaccgatggtgctcctaatatggtggcatgc
gtgagagagctgaagcttcaccaccacatttgtgttgctcacaccctcaatcttgttgtg
aagagggcgcttgaccagcaccctgtgctctctggcctccgggccaaagcaaggaagctg
gttggttactttagaagcagcaccactactaaggtatgctcttttcttttattccaatat
ataatgttaatagtttgtctgtactcctactgcagtgacttaatggcctactcttctgta
tctttaaaggagaagcttacacaagtgcagcttcagctgggcatgcaagcaaccaagctg
atgcaggaggcggaaacaagatggaacagcacctacttgatgctgcaatgtctggtggag
ttgagggagccagtaggagcggcattggctggattacacactgacattccctttttcact
gccagtgagtttgacattgttgtagcgtgcctttctttactctctcctttctatgacgcc
accacggagctctctgcagaagaggacggggataaagttatccccctcctgaagatgata
gagaaagcccttcaggaggaagacaccaagtcggcacccgcagtagcagtggaaatagga
gagcagctcatcagacagctcagggagaagctgcacatgctccagtcaatgagcatcttg
tcgttggctacactcctggacccacgatttaaacttatagcatttttcagcaacacaaaa
gctgctgaagcagtgaagcgcttgacttcagagtgtgccaccatcatccgacggaacaca
gaagagaacactcacgagattccccaggcttccacctctcaagaattcactggaggtgct
caggcctctgaggaatcttttagcctgaacactctgcagaggaagagacagaggtaa
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