Xiphophorus couchianus (Monterrey platyfish): 114147555
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Entry
114147555 CDS
T05908
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D-like
KO
K22038
volume-regulated anion channel
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114147555
Ion channels [BR:
xco04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
114147555
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_14
LRR_4
LRR_8
LRR_1
LRR_R13L1-DRL21
LRR_LRWD1
LRR_EndoS
LRR_9
Motif
Other DBs
NCBI-GeneID:
114147555
NCBI-ProteinID:
XP_027877837
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Position
7:28493057..28508845
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AA seq
957 aa
AA seq
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MEGPGPELEFSAAYSPSLWQHLKSRRVGQLSRSLFFTAEPERSGLNSLQSGRGGRAVELL
KSFTKLWSKFSARHPSDWTMFSLSELAPVDPQQNTWKLLKPWWEVFMDYLVVLMLMTSVL
ACTVQLSRDRVVCIPSEPPFNASDGVHPPVGSDAVLASSEAPLHVPHSIGPNLQSPAQGR
RTHLVYQQYIYVSQVCYHEALPFCSRFFPYMALLQSLLLAASGSFWLHFPHTSSRIEQFL
SILAKCCESPWTSQALSQAARQENIRDLERPPRHAAASAAWFSIAPARTGHSSTDSGTDS
PLLKKSAYPPSPCPSTVSSNSTMSSVSLGSETHLCSSEPPVNSERPGQVLSLDKSDGEQA
RALFERVRKFRSHCESSAVIYKVYLAQTIFKLLMVTLIMSYTVPFLGSLSFSHVCQPAEQ
TLVGYTTFECVHSLSSLLRKLLVTYLILLGIYALLNFYTLSWSFRSCLRKYSFHSLKDIP
DLMNDLAFLIHMLEQYDPLLVQRLSVFLSPVSESRLLEQSLERHWGEEKLQALTSVDAEG
CSTLQLVALPRLPPALFTLSQLQALKLELIADARFTSQVANMTSLRELHLYHCPTAADPG
ALAVLQERLEILHITFAQASQIPSWVLSLRNLHELHLSGRLGSEGGVGHGWALGSLRQLR
HLRVLVIHGMLQRVPSELCEVAGSLVKLEIHNEGARLLVLTGLKRMPDLTELWLQDCQLD
RLPSALLALTRLQTLDLQHNNLRTLEELLGLVHLQCLSCLKLAYNHVLALPPTVGVLRGL
ELLDLSNNQLKSLPPGLFTLHRLRRLLLAGNLIPELPSEVKALGLLAELDLSGNRLESLT
SDLFSCSELRVLNVSRNSIGSLPGGISALSHLYRLDLRSNSLEELPAELGCCLGLCGGGL
LVERWLFLSLPPHVRDFLSRSYPTSKGYLEDHSRPESDTFPYSPAQWSFSAALESQI
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgggcctgaactggaattctcagcagcatattctccgtctctatggcaa
cacttgaaaagccggcgtgtcggccagctcagtaggagtttgtttttcaccgcagaaccg
gagcgctccggcctcaactctctgcaaagtggcagaggaggaagagcagtggagttgcta
aaaagttttacaaagttgtggagcaagttttcagccagacatccttcagactggaccatg
ttctccctgtcggaactggcgcctgtggatccgcagcagaacacgtggaagctgctgaag
ccctggtgggaggtcttcatggactacctggtggtcctgatgctgatgacgtccgtcctg
gcttgtactgtgcagctgtccagagacagggtggtgtgcattccttctgaaccgcctttc
aacgcaagcgacggtgttcatccaccagttggcagcgacgcagtcctcgcgtcttctgaa
gcccctctgcatgttcctcacagcatcggcccgaatctccagtcacctgcacagggacgc
cgcacacatctggtctaccagcagtacatttatgttagccaggtgtgctaccacgaagct
ttacccttctgttcacgcttcttcccctacatggccctgctgcagtctctgctactggcc
gccagcggctccttctggctgcacttccctcacacctcttcccgcatagaacaattcctg
tccattttggcaaaatgctgcgagtccccctggacgtcccaggccctgtcccaagctgca
cgccaggaaaacatccgagatctggagagaccaccccgccacgccgccgcgtccgcagct
tggttttcgattgcgccggcccgtacgggccactcaagcacagactctggcacagacagc
ccgcttttgaagaagtcggcctacccaccttctccttgcccttccacggtctcctctaat
tccaccatgtcgtctgtgtccctcggctctgagacgcacttgtgctcttccgagcctcca
gtgaacagtgaacgccccgggcaggtattgagtctggataaaagtgatggagaacaggcc
agggccctgtttgaaagagtcaggaagtttcggtctcactgcgaaagctccgctgtcatt
tataaggtttacttggctcagacgatatttaagctgctgatggtaacgctgatcatgagc
tacaccgtcccattcctcggctccctctccttcagccacgtctgtcagcctgcagagcag
acgctagtgggctacacaaccttcgaatgcgtccactcgctctcatccctcctgcgcaag
ctgcttgtgacctacctaatccttctagggatttatgcacttcttaatttttacaccctc
agctggagttttcgcagctgtcttcgaaaatattccttccactccctgaaagacattccc
gatctgatgaatgacctggccttcctcatccacatgctggagcagtacgacccgctgctg
gtgcagcgcctctccgtgtttctgtcgccggtcagcgagagccgactcctggagcagagc
ctggagaggcactggggagaagagaagctccaggctctgaccagcgtggacgcagagggc
tgcagcaccctgcagctcgtcgccctgcctcgcctccctccggctctgttcaccctcagc
cagcttcaggccctcaaactggagctcatcgctgacgccaggtttacgtcgcaggtggca
aacatgacttcactcagggagctccacctttaccactgccccacggctgcggatcccggt
gcgctcgccgtcctccaggaacgccttgagattctccacatcaccttcgctcaggcgtca
cagatccccagctgggtcctctccctccgcaacctgcatgaactccacctttcgggtcgc
ttgggcagcgagggcggcgtcggtcacggctgggctctggggagcctgcggcagctccgg
cacctccgggttctggtgatccacgggatgctgcagagggttccgtcagagctgtgcgag
gtggcaggaagcttggtgaagctggagatacacaatgaaggcgcaaggttgcttgtgctg
acgggactcaagcgaatgccggacctgacagaactctggctgcaggactgccagctggac
cgcctgccctcggccttgctcgcgttgactcgcctccagacgctcgacttgcagcacaac
aacttgagaaccctggaggaactgctcggtctggtccacctgcagtgtctttcttgcctc
aaactcgcctacaatcatgtgttggcgctgccgcccaccgtcggcgtccttcgaggcttg
gagcttttggatctgtccaacaaccagttgaagagtctgcccccggggctcttcacgctc
caccggcttcgtcggctgctgctagctggcaacctgatacctgagctgccctctgaggtc
aaggcattggggctgctggcagaactagacctgagtggaaacaggttagagagcctaacc
tctgacctcttcagctgctcagaactccgcgtcctaaatgtgtctcgcaactcaatcggt
tcactgcctgggggaatttcagcattgagccacctgtacaggttggatttgcgcagcaat
agtctggaagagctgcctgctgagctgggctgctgtttggggctctgtggaggtgggctg
ctggtagagaggtggctcttcctctccttgcctccacacgtcagggacttcctgagccgt
tcttaccccaccagcaagggatacttagaggatcactccaggccagagtcggacactttc
ccgtactctcccgctcagtggagcttctctgcagctctagagtcacagatataa
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