Xiphophorus couchianus (Monterrey platyfish): 114147705
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Entry
114147705 CDS
T05908
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114147705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114147705
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
114147705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
DUF3450
Motif
Other DBs
NCBI-GeneID:
114147705
NCBI-ProteinID:
XP_027878065
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Position
7:9021080..9039623
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AA seq
1174 aa
AA seq
DB search
MIPEPSAASRSSGKNANSQAEATSSGAVSPSEEESGNENRQKSVRRRRRACSVSENVKSK
RARASGSSVRRARGKRAKEKQVEAVTLFEVITMGKSAIQAVIDDWIEAYVTDRDASLLDL
ISFFIQCCGCKGAVTAEMCQSKEDKQVKSKMVEELDEAVGLQYKRFLAFPWILTVTWPMD
ADSAEYPLVQSGPSGRWFHSEFCDFVSVLVAQCQHSVLFDSYLMNSVISLLTELSNSYVR
AFRHTCTLAAVKLLSSLLSVALSLSVGIENSQKLYNVQRTKTVRQKTQQLERTQKKISEL
QEKRAEVESMMDVIFKGVFLKRYRDMLPEIRAVCMEELGLWMKLYSSSFLNDSYLKYMGW
MMHDKVPDVRQKCVLALQGLFGDPVLPKLDLFISRFKNRLISMVLDKDNEVAVQTMKLLV
LISRATDDVLTSEDYKQLLQVVYSSHRPLAATAGELLYSRILSAVAPTSDNQDERSEEDE
RRRQMFDRLKALLRFYQESELHKHVVYLVDSLWDCGGSLLKDWPTLTAALLQNSSGFTPA
EQAVIVEILVASVRQATDGPALVGRSGAKKIMSNREKKIQADDCLTLTEHLFSVLPKLLS
KFSCSGDTVASLMRIPQYFHPDSQEAKNTQSVSSLMTEMAAALDLHSGPAVLEAAARTYL
SLCGDGAAWAAAAGASRDSLVQRWVDRLTETMGASLRRGCFSAEEDETRQIVATLKKLRA
FHNCHDLSRWGVFDLLSPLLTEDGRLGGPPPEVLEEALQCMSFAMLWSLSTSSQTLTCRE
KAVAQRLQLRLFCERSYRCLSHCNHSVKNQAFLGVCDVLTAHSYQMQVWDPTCFGPLLYT
PSPKLQRALLTFVCMNVFVVPDSDNQSRVSESSEVERLEELHRRRNLLAAYCKLIVHGVL
EMSTAAGIYTHYMKHYSDFGDIIKETIYRTRQTDKIESTRTLVLCLQQLFVQLKREQESG
GRAHSGVQTFTCIKELARRFALTFGDLVKFRECLVMIHRNGMEFVFQEFRQTPDNATPLY
LNYLTLLSEFSNKLLKPDKKAVLSYLQKLTAEHIIDLREECWQPLIYYRASLLAVAEMED
AVSYVSSDRRPCLHSRSPVSKQKPEGYKSLSQGRPAEQVTKVNKPSISHSSQVNPGDTDP
FSVPPELHGRSFNMAATVLCNNSESDDGSVDIEL
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgataccagaaccttctgctgcatccaggtcttcagggaaaaatgcaaactctcaggct
gaggcgacctcctctggagccgtcagtccctctgaggaagagtcagggaacgagaaccga
cagaagagtgtgagacgacgaagaagagcgtgcagcgtctcggaaaatgtcaagagcaaa
agagccagagccagcggcagcagtgttcgaagggcacggggcaaacgcgccaaagagaag
caagtggaggcagtgaccttgtttgaggtgatcaccatgggcaagagcgccatacaggca
gtgatagatgattggattgaggcatacgtgacggacagagacgcctctctactcgacctc
atcagcttctttatccagtgctgtggctgcaaaggcgcggtcacagcagagatgtgccag
agtaaagaggacaagcaagtgaaaagtaaaatggtcgaggagctggatgaggctgttggt
ctgcagtataagcgattcctagcttttccttggattctgaccgtcacgtggcccatggat
gcagatagtgcagagtatccactcgtgcagtccgggccgtccggtcgctggtttcactca
gagttctgcgactttgtgtcggtgctggtggctcagtgtcagcacagcgtcctttttgat
agctacctgatgaacagcgtcatctcgctgctcactgagctgtccaactcatacgtaagg
gcgttcagacacacatgcacgcttgcggcggtgaagttgctgagctctctgctgagcgtg
gctctgagcctgagcgtcgggatcgaaaacagtcagaagctgtacaacgtgcagaggacg
aagacggtgagacagaagacccagcaactggagaggacgcagaagaagatctcggagttg
caggaaaagagggcggaggtagagagcatgatggacgtcatcttcaaaggggtttttctc
aaaagatatcgggatatgcttccagaaattcgcgcagtctgcatggaggagttgggcttg
tggatgaagctctacagttcatcattcctcaatgatagttacctcaaatacatgggctgg
atgatgcacgataaggtaccggatgtgcgtcagaagtgtgtgttagctctgcagggtctg
ttcggtgatcctgttctccctaaactagatctattcatcagtcgcttcaagaatcgtctg
atctccatggtgctagataaggacaatgaggtggcagtacagaccatgaaactattggtg
ctaatctccagagccacagacgatgtgctgacatctgaagactacaagcagctccttcag
gttgtttactcctctcatcggcctctcgcggccactgcaggggagctgctctactcaagg
attctcagtgctgtagctccaacctccgataatcaggatgaaaggagcgaagaggacgag
cgaagaagacagatgtttgacagacttaaagctttactgcggttttatcaggagtctgag
ctccacaagcatgttgtttacctggtggacagcctttgggactgtggtgggtctctgctg
aaagactggcccacactcacagctgcactgctgcagaacagctcaggttttactccggca
gaacaagctgtgattgtggagatcctggttgcgtcggtgcgtcaggccacagacgggcca
gctctggtagggaggagcggggccaagaagatcatgagcaatagagaaaagaaaattcaa
gctgacgactgtctaacgctcactgaacatctgttttctgtgcttcccaagttactctcc
aagttttcatgtagtggcgacactgttgcttccctgatgcggattcctcagtacttccac
ccagacagtcaggaagctaaaaacacacagtcagtttcaagcctgatgacagagatggca
gctgctttggaccttcactcgggtcctgcggttctggaagcggcggctcgaacatacctc
agtctgtgtggcgatggcgcagcctgggccgcggcggccggagcctcacgagactctctg
gtccagcgctgggtggaccgactgacagagacgatgggggcgtcgctcaggcgtggctgt
ttttctgctgaggaagacgagacgagacaaattgtagcgacactgaagaaactcagagct
ttccacaactgtcatgacctcagtcgatggggcgtgtttgacctgctgtctcctctcctg
acggaggacggcagactgggaggaccaccgccagaggtgctggaggaggcactgcagtgc
atgtcgtttgccatgctgtggtccctcagtacgagcagccaaactctaacttgcagggag
aaagctgtggcccagaggctccagctgcgtctcttctgtgagaggagctatcggtgtctc
tcccactgcaaccacagtgtgaagaatcaggccttcctgggtgtgtgcgatgtcctgacg
gctcactcataccagatgcaggtgtgggatcccacctgcttcgggcctctgctctacact
cccagtcccaaactgcagagggcgctgcttacctttgtatgcatgaacgtgtttgtcgtc
ccagacagcgacaaccagagcagagtcagcgagagctctgaagtggagaggctggaggag
cttcacaggagaaggaatctgctggcggcctactgcaagctgatcgtacacggagtgctg
gagatgagcacggcggcgggaatctacacgcactacatgaagcattacagcgactttggc
gacatcatcaaggaaacgatttacaggaccagacagacggataaaatcgagagcactcgt
actctggtgctctgcttgcagcagctgtttgtgcagcttaagcgggaacaagagagcggt
ggcagggctcactcgggcgtgcagactttcacctgcattaaggagctggccaggcgcttc
gccctcacgttcggagacctcgtcaagtttcgcgagtgtctcgtcatgatccacaggaac
ggcatggagtttgtgttccaagaattcagacagactccagacaacgcaacaccgctgtac
ctcaactacctgaccctccttagcgagttctccaacaaactgctcaagccagacaagaag
gcagtgctctcctacctgcaaaaactcaccgcagagcacataattgacctcagggaggag
tgctggcagccgctcatctactatcgtgcgtctttattggccgtggcagaaatggaggac
gccgtgtcgtatgtgagctcagacaggaggccctgccttcacagtcgctctcctgtctcc
aaacaaaaaccggaaggatacaagtccctaagtcaaggtcgcccagctgaacaagtcact
aaggttaacaaacccagcatcagccacagctctcaggtgaacccgggtgacacggatccg
ttctccgtccctccggagctccacggaagaagcttcaacatggctgccactgtcctctgc
aacaacagcgagtcagatgacggcagcgtggacatcgagctgtga
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