Xiphophorus couchianus (Monterrey platyfish): 114147741
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Entry
114147741 CDS
T05908
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114147741 (stxbp5l)
Membrane trafficking [BR:
xco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
114147741 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
114147741 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
EIF3I
Lgl_C
Beta-prop_DCAF4
Synaptobrevin
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
114147741
NCBI-ProteinID:
XP_027878115
LinkDB
All DBs
Position
7:29690276..29834348
Genome browser
AA seq
1268 aa
AA seq
DB search
MKKFRKVLDGLTTSSPGGTMGSPSCGSAAGTPTAAPTPKEIDVQETLVSENFQLCKTVRH
GFPYQPTSLAFDPVQKILAIGSRSGGVRILGRPGVDCYCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAVLHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
ILSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFEGGTIVQWDLRAKKADFRI
YYDEAIHSVSWHHEGKQFMCSHSDGSLTLWTLRNTTKPFQVTFPHGKIQKDGRKESCKPI
LKVEYKTSRSSEPFVIFSGGLSYDKAGRRPALTIMHGKAITVLEMDYPIVEFMVLCETPY
NNEVQDPYAVVVLLEKDLIVVDLTQSNFPVFENPYPMDIHESPVTCTAYFADCPPDIIPI
LYSIGAKNKKTGYSHKEWPIGGGTWTLGSHTYPEIIITGHADGSIKFWDASAFTLQMLYK
LKTSKVFEKPKPGEGRAAELGEEDPFAVQMVSWCPHSRIFCVVGISAHIILYRFSKYDAN
TQIVSLEVRLQCEPEDIITPSENENNPCFSEPGSHSPQPHHQHPLSPGSRTPDGAKDSIP
CLKVKDKMVRVPPGYQSDLVIQLLWVDGEPPQQITSLDLNSAYGLLAFGNCNGLAVVDYL
QKTVILCISTLDLYGATDPYQRLTRSPRRNRQSTSEHCMRGLSNFYSDSKKRIRTSYQSL
TELTDNQQSIDMERSKSPTSVHYPTSLHNDPRILPEPVASLRASHCSPVFYLLDNVKGPG
RKLSLPTDLKTDLDHVNGHCTSPTSQPCSAGKPRIPMGPEGPRLTRRGPGRPPFRKAQSA
ACMEISLPVSHTEGHASRRAMLQQLHGVTMYSHDEHHTTAAYCWNERESRENSFSRSRSS
SVSSIDRDTKEAITTLQFGESYGRKSDALPTPCLWVGTSLGVGILIPLSIPTDQEERMED
PVTVGPSGAVQMLKGSVLRFGFLDCNGALIQSPYEVWRDLNAPEDPDRPRRRKLVHFSPS
SSQDAFGEGHLAIVCSERQAKVFLMPSQSCLFVHNITESSFVLRADVVSLCNSVCLACFC
ANGHVMTLSLPSLRPLMDVNYLPLTDMRIARTFCFTNEGQALYLSSPTEIQRITYSQEMC
DNLQEMLGELFTPIETPEAQNRGFLKGFFGGNAHTFDREELFGEAAAGKASRSLAQHIPG
QGGVEGMKVAASGAVGELARARIALDERGQRLGELEERTALMMTSAETFSKHAHELMLKC
KDKKWYQF
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcggaaggtgctggacggtttgaccacctcctctccgggggggactatg
gggtccccatcgtgcggcagcgcggctgggactcccaccgcggcgccgactcccaaggaa
atcgacgtccaggagacgctggtgtcggaaaactttcagctgtgtaagacggttcggcat
ggattcccataccaacccacgtccttggcctttgaccccgtgcagaagatcctggccatt
ggttcaagatcaggtggtgtacgaatactgggccgaccaggggtggactgctactgtcaa
catgagagcggagcagctgttcttcaacttcagttcctcatcaatgagggggcgctggtt
acagcctgtgcagatgacacactacacctgtggaatctgcgccagagacgaccagcagtc
ttgcattcactcaaattcaacagagagaggatcaccttttgccacctgccctttcagagt
aaatggctgtacgtggggacggagcgtggaaacacacacatcgtcaacattgagtctttt
attttgtctggatatgttatcatgtggaacaaggccatagaactgtcaactaaaactcac
ccaggtcctgtagttcatctgagtgacagcccaaaggacgaaggcaagttgcttatagga
tttgagggtggaaccattgtgcagtgggacctccgggccaagaaggctgacttcagaatc
tactatgatgaggctatccattcagtcagttggcatcatgaagggaagcagtttatgtgc
agtcactcggatggcagcctgacactatggaccctcagaaacactaccaagccattccag
gtcacctttcctcatggaaagatacagaaggatgggagaaaggagtcatgcaaacctata
ctcaaagtagagtacaagacctcaaggagcagtgagccttttgttattttctctggtggt
ctttcatacgacaaagcaggacggcgaccagctttaaccatcatgcatggcaaggccatc
acggttctagaaatggactatcctattgtagagttcatggtcctctgcgaaactccatac
aacaacgaagtccaggacccttatgcagtggtggtactgttggagaaggacttgattgtg
gtggatctgacacagagcaactttcctgtgtttgaaaacccatatcccatggatatccat
gagtctcctgttacctgcacagcttattttgcagattgtccaccagacattatccccatt
ctttactcaataggagctaaaaacaagaagactggctatagtcacaaggaatggccaatt
ggtggtggaacatggacattaggctctcacacttatccagaaatcatcatcacaggacat
gctgatgggtcaataaaattttgggatgcatctgcattcacactgcagatgttgtacaag
ctgaagacctccaaagtgtttgagaagccaaagccaggtgagggccgggctgctgagctg
ggggaggaagacccttttgctgttcagatggttagctggtgccctcatagtcgcatcttc
tgtgtggtcggcatctcggctcacattattctgtatcgcttcagcaaatatgatgccaac
actcagatagtgtccttagaagtacgcttgcagtgtgagccggaggatattatcactcca
tctgagaatgaaaacaatccctgcttctcagagccaggctcccactcaccccaaccccac
caccaacacccgcttagccctggcagcagaacaccagacggtgctaaagacagcatcccc
tgcctcaaagtaaaggacaagatggtccgggtccctcctggctatcagtcagacttggtc
atacagctgctgtgggtggatggtgaacccccacagcaaatcaccagtctggacctcaat
tctgcatatgggctattggcgtttgggaactgtaatggtcttgcagtggttgactactta
caaaaaactgttatattgtgtatttcgacactggatctatatggagccactgatccctat
cagcgccttactcgttccccccgtaggaacaggcagtccacctcagagcattgcatgcgc
ggcctgtctaacttttattcagattcaaagaaaaggatccgtacatcctatcagagcctt
actgaactcactgacaaccagcagtccatagacatggaaagaagcaagtctcccacttca
gttcattacccaacctcccttcacaatgatccacgcatcctgccagagcctgtggccagt
ctgagagccagccactgcagtccagtcttttacttactggacaatgtaaagggacccggc
agaaagttaagtctgcccacagatcttaagactgatcttgatcatgtcaatggacattgc
actagtcccacctctcagccctgctcggcggggaagcctcgcattccaatgggtcccgaa
gggccacggctaacccgcagaggccctggccgaccacccttccgaaaggcccagtctgct
gcttgcatggagatctctttgcctgtgtcccacactgaagggcatgcatcaaggagggca
atgcttcagcagttacacggagtcactatgtactcccatgacgagcaccacaccactgcc
gcgtactgctggaacgagagagagagtcgtgaaaactccttcagccgctctcgcagttcc
agcgtgtctagcattgacagggacaccaaagaagctatcaccacactgcagtttggagag
tcctatggacgcaagagtgatgccctgcccactccatgtctgtgggtagggactagctta
ggagtgggcatccttatcccactatcgatccccactgaccaagaggagaggatggaggac
cctgtcactgttggccctagtggagcagtccaaatgttaaaaggctctgtgcttcgcttt
ggtttcttggactgcaatggagccctaattcagagcccatatgaggtttggcgggacctg
aatgccccagaggatcctgacagaccacggaggcgcaagctggtccacttttccccgtcc
tcttcccaggatgcctttggagagggacatttggccatagtttgctctgagaggcaggcc
aaagtcttcttgatgccctcacagtcttgcctctttgtccacaacatcacagagtcgtcc
tttgtgcttcgagctgatgtggtatctctgtgcaacagtgtgtgcctggcctgcttctgt
gctaacgggcatgtcatgacactcagtttgcccagcttaagaccgctgatggatgtcaat
tacctgcctctgacagacatgcgcatagcaagaaccttttgtttcaccaatgaggggcag
gcactgtatctcagctccccaacagaaatccagagaattacatacagccaggaaatgtgt
gacaacctgcaggaaatgcttggggaactgtttactccaatagaaacaccagaagctcaa
aacagaggatttttaaagggcttctttggaggaaacgcccatactttcgacagagaggag
ctttttggtgaggcggcagctgggaaggcttctcggagtctggcacagcacatccccggt
cagggaggcgtagaaggcatgaaggtggcagcgagtggagcagtgggggagctggcacgg
gctcgtattgctctggatgagagaggccagaggcttggagagctggaggagcggaccgct
ctgatgatgaccagtgcagaaactttctccaaacatgctcatgagctgatgctgaagtgt
aaggacaagaagtggtaccagttctaa
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