Xiphophorus couchianus (Monterrey platyfish): 114147770
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Entry
114147770 CDS
T05908
Symbol
rnf17
Name
(RefSeq) RING finger protein 17 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114147770 (rnf17)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Gene silencing
piRNA pathway
114147770 (rnf17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-C3HC4_4
DUF6909
phiKZ_IP
zf_RING_Vps8
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
114147770
NCBI-ProteinID:
XP_027878178
LinkDB
All DBs
Position
7:complement(6538093..6561798)
Genome browser
AA seq
1591 aa
AA seq
DB search
MMEKGDSPSAAICKLCGNAFKLPEDETDGNLPRILACGHIFCTNCLVSIQCEGAIRCPDC
EFFATLPEGGVNGLQEESRIIGLIYTAEMNQIKSLRCNGPKVCQKNRSSPRATTISNSDV
VKQAADIKKIEKTVDESLVQAAENLAQLENIYETLTADLAEQVKRERSRLEMEITQASNK
AVHAIQKWKATQLNQLKKMETRFPSSQAVVSHVQERIKALEIAMQMAREIRRVPFLEQYC
ILDKVLETLQTPVDQMAIDLKCITDGTGMSCVFQSENVSRCLMLSLKMEACGSNAVTKQL
VGSHQSNISIKSSSRKHFKHRNGCSNLPSSKPEKWEPESQGASRSSAQGTHLVPQPGPKI
SLSPHSSFSDLGSPDVIIEEFFDDNPEPVTPTGPEMANNEWRTQKRRKCHLLRDKKCKEV
THWVVVTHVVNPSHFYVRYVAEKKESEVLSRNINKLCFGEGCQFTLGDTMERGSMVFVKW
KEVVWCRATVVEVFQKSCVKAVKACPVTQLASLRVFFPDYGFTKSITIQSEEAAAESLLK
AVNNHLRKVAESVNVELKNFAPQAVRCSLKDLVPYNLTEGWSEEAKAEFCCVVGSAAVEM
RPLGQDRDSLLVDLRKAPLEQSTDVPISVREYLVFIEVARFYSPVTLGRKPLMYYSPVYP
EASTELDAVVSHINNLSDFYIQLVDNMESLLLSAKLQDYYNALKDEEFRVYCPAIGQACV
ARFEDKLWYRAQVISHPGGRKVEVRYVDFGNKQVLSVSDLRKIKDEFFALPAMAVHCCLA
DVTPLDGESWSEACSKRFISLAHQQLVTVMAKGKVPKTEPLPLGVFVGGVNQPKTSIAEL
LVKENLVSFKESKQSTKSKKPSRPESTVWDPPLELGAGAVKAESSGHVTIEEQIDDPVEL
QAQLKLPDQRKDLQVMVTHVNSPSSFYVRLTNSDPQLKRICELVKQECALMEPQEVVWKA
DMYCAANINGVWERGRICSDVTSNNIAEVRRCDHGNKVKIHVSNLYPLPSSLIGSLAIEC
TVNDIRPTGGRSTWTDTACDLISYYLTGASALMTIKEETEEHPLPVTLSCSNRMGEYISI
ADFLVDEGLAFRERKPKATAVQKPKVTDTQTPATDPESCEKEKSTSPPSVSPFPSTQSAS
IPPKPFPRSIITAEKVKTSMYNPPELPCPGHILINVSAIGDDGVIYARTQSAEYQIEQLK
EGIQKSIKTLPRQKPYTWKLVQGCAVIGPDMLWYRGQVLELLGGHVKVQYVDYGLVENIP
VVHVYPMLLCVEVPQLCMPCQLFGINPVGGKWQRDGVALMREVLLNRSVGMQVVALPAEP
RGAVTVEIFLDGMSLSRILCHNEHASMDGALSTEKSLVVMPPASLLDIWDINTESLMGPE
EPVLGSFVSPNLPLEGEHFEVRVTHLWTPNELFLWPLKDMAGSEMMDDSLDEALTRINAN
ITSLPRLTSFPYGGPCLAEYSDGKYYRARLMKFTSIEPLVILVQHVDFGSDDSLPTSKLR
QMPSELLLFPTRAIKVKVAGFKAPSVERRGDVLPYCPAWSVKAVMEMTDLLHNNITATVV
SREPELKVQLYNEDRELVHLPLVNSGLAELD
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaaaggagacagtcccagtgctgcaatttgcaaattatgtgggaatgcgttt
aaacttccggaggatgaaaccgatggtaatctgccccgtatacttgcatgcggccacatc
ttctgcacaaactgccttgtgtctattcagtgtgaaggtgccataagatgtccagattgt
gagttttttgcaacccttccagaagggggggttaacggcctgcaggaagaaagcagaatc
ataggtctgatttacactgctgagatgaaccagatcaaaagcctccgctgcaatggacca
aaggtgtgccagaagaacagatcatcacctcgtgcaaccactatttccaacagtgacgtt
gtgaagcaggcagcagacattaagaagattgagaagacagtagatgagtcattggtccag
gctgcagaaaatcttgcccagttggaaaacatctatgagaccctgacagctgacctggca
gagcaggtgaagagagagagatcccgactggagatggagatcacccaggcctcaaataaa
gctgtgcacgcgattcagaaatggaaagctacacagttgaaccagctaaaaaaaatggag
acacggtttccctccagccaggcagtggtgtcccatgtccaggagaggattaaagctttg
gagatcgccatgcagatggccagagaaatacgccgggttcccttcttggagcagtactgc
atcctagataaggttttagaaacactgcagacaccggtggatcagatggccattgatttg
aaatgcatcactgatggaactggaatgagctgtgtttttcagtcagagaacgtgagccgg
tgtttgatgttgtctctgaaaatggaggcctgcggctcaaacgctgtaaccaagcagcta
gtgggaagccaccaatcaaacatctccatcaaaagctcttcaaggaaacatttcaagcac
agaaacggctgctccaatctacccagtagcaagccagaaaaatgggagccagagagccaa
ggggccagtagatcatcagctcaagggacccatctggtcccacaacctggccctaagatc
agcctttccccccacagctcgttctcagaccttggaagcccagatgtgattattgaggaa
tttttcgacgataacccagagcctgtgactccaactggacctgaaatggccaacaacgag
tggagaacccaaaagagacgaaaatgtcacctgctccgtgacaaaaagtgtaaggaagtt
actcactgggtggtggtgacccatgtggtgaatccaagtcacttctacgtccgctatgtg
gctgagaagaaggaaagtgaggttctgtcaaggaatattaacaaactctgctttggagaa
ggttgccagtttacactgggagacaccatggagagaggctccatggtctttgtgaagtgg
aaggaggtggtgtggtgccgcgccacagtggttgaagtctttcagaaaagctgtgttaag
gctgtgaaggcctgtcccgtcacccagctggccagtttgcgggtcttcttcccagattat
gggttcactaaaagcatcaccatccagtccgaggaggcggctgccgagtctttacttaaa
gctgtgaacaaccacctgaggaaagtggctgaatctgtgaacgtagaactgaaaaacttt
gctcctcaggccgtaagatgttcactgaaagacctggtcccatataacctgacagagggc
tggagcgaagaggcaaaggctgagttctgctgtgtggttggatctgctgctgtggagatg
cgacctttgggtcaggacagagactctttgttggtggatctaagaaaagctcccttggag
caatccactgatgttcccatctctgtcagggagtacctcgttttcatcgaggtggctagg
ttttactccccagtgacactgggcaggaagcctctgatgtactactcgcctgtgtatccg
gaagccagtacagagctcgatgctgtggtcagccacatcaacaacctctctgacttctac
atccagctggttgacaacatggagtccctgttgctgtcagccaagcttcaggattactac
aatgcactgaaagacgaggagttccgggtctactgccctgcaataggacaggcttgcgtt
gctcgttttgaagacaagttgtggtacagagctcaagtcataagccatcccggtggacga
aaggtggaagttcgatatgttgactttggcaataagcaagttttgtcagtcagtgacttg
aggaagatcaaagatgagttctttgctcttcctgccatggcagttcactgctgtttggca
gacgtgactcctttagacggagagagttggagtgaagcctgcagcaaaagattcatcagc
cttgctcaccaacaactggtcactgttatggcaaaaggaaaagtacctaagactgagcct
ttgccccttggagtgtttgtgggtggagtgaaccagccaaaaaccagcatagctgagctg
ctggtgaaagaaaatttggtctcctttaaagagagcaaacagagcaccaaaagcaaaaag
ccttctcgtcccgaatccactgtctgggatcctccgctcgagctgggcgcaggtgcggtg
aaagccgaatcttcgggtcatgtcactattgaggagcaaatcgacgaccctgtggagctg
caggcgcagttgaagctgccggatcagcgcaaagacctccaagtcatggtcactcacgtc
aactcaccaagcagcttctacgtccgactcaccaattctgaccctcagcttaaaagaata
tgcgaactggtgaagcaggagtgtgccctaatggagccgcaagaagttgtgtggaaggcg
gacatgtactgcgctgccaacattaatggagtctgggagagaggacggatctgcagcgac
gtcacatcaaacaacattgcagaagtcagacggtgtgaccatggcaacaaagtgaagatc
cacgtcagtaacctgtacccacttccgtcctctttgatcggctccctggcaatagagtgt
actgtgaatgacatcaggccaacaggcggccgatccacctggacagacacagcctgtgac
ctgatctcctactacctgacaggagcttcagctttaatgacaatcaaggaggagacagag
gagcatccgttgcccgtcacgttgtcctgctccaacagaatgggagagtacatcagcatc
gccgacttcctggtcgacgaaggcctcgccttccgggaaagaaagccaaaggccacagct
gtccaaaagcccaaagtaactgatacccagactccagccactgacccagaaagttgtgaa
aaagaaaaaagcacctcccctccatctgtttctcctttcccttccacccaatctgcttcc
attcctccaaaaccattccctcgctcaattataacagctgaaaaggtgaagacttcaatg
tacaaccctccagagctgccgtgtcctggtcacatcctcatcaatgtttctgctattgga
gacgatggtgtcatttatgccagaacacagagtgcagagtatcaaattgaacaactgaag
gaagggattcagaagagcatcaagacgttacccagacagaagccctacacctggaagttg
gtccagggctgtgccgtcatcggaccagacatgttgtggtaccgaggacaggtgctggag
ctgctgggaggtcacgttaaggtacaatatgtggactacggtctggttgagaacatccca
gtggttcatgtgtatcccatgctactgtgtgtggaggttcctcagctctgcatgccctgc
cagctctttggcatcaaccctgttggtgggaaatggcaacgagacggagtagctttgatg
agggaggtgttactgaaccgatccgtgggcatgcaagttgtggcgctgccggctgagccc
cggggagccgtcaccgtggagatcttcctggatgggatgagtctcagcaggattctgtgt
cacaacgaacacgcctccatggacggcgctctctcaacagaaaagagtctggtagtgatg
cctcctgcctccctgctggatatctgggatatcaacactgagagtctaatgggcccagaa
gagccagtgttggggtcctttgttagcccaaacctgccactagagggagaacactttgaa
gtcagggtcacacatttgtggacccccaatgagctgttcctgtggcccctgaaggacatg
gctggctcagagatgatggacgattctttggacgaagctttgactagaatcaatgcgaac
atcacctctttgccccgactgaccagctttccatatggtggtccatgtttggcagagtac
agcgatggcaagtactaccgggccaggctgatgaagttcaccagcatagagcctctcgtg
atcttggttcaacatgtagatttcggatctgacgactctctgccaactagcaagctgcga
caaatgccatctgagctgctgctgtttccgacacgcgcaataaaagtcaaagtcgctggc
ttcaaggcgccgagcgtggagcggcgcggagacgttctgccgtactgccctgcgtggagc
gtgaaggctgtgatggaaatgacagatctgctgcacaacaacatcacagcaactgttgtt
tcacgagagccagagctcaaagttcagctgtacaacgaggacagagagctggtccatctg
cctctggtgaacagcggattggctgagctcgactaa
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