Xiphophorus couchianus (Monterrey platyfish): 114147772
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Entry
114147772 CDS
T05908
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2 isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114147772 (ttf2)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114147772 (ttf2)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Zn_ribbon_GRF
ResIII
DEAD
Thioredox_PDIA6_C
Motif
Other DBs
NCBI-GeneID:
114147772
NCBI-ProteinID:
XP_027878183
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All DBs
Position
7:complement(6512640..6524608)
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AA seq
1129 aa
AA seq
DB search
MEIVKCDSHGSVCMLKTGVKEGPNKGKSFYICIDKQGCDFTQQASIAPSHCLHHEESVVE
LQALSYSQQQQSHRLYYRCAVGKREGQRWCGNVPWTAQEKERRTPLTDSQLQPSCLPRVR
NPFKAPDKTDKSSERRRMQSGGCEEKEGEKKTGRASHNAEGRQRSQKENTEALGAEERKS
SAPETYQGKLLPAGMKVKKRISSEESKSKADGVDRTAVRTQDKAGKSSAEEGESEKTIST
RDIEKISQMCPDLLKNIPQEATNSQTSSLSQNEPTAEKSVAESVPGRSSQSSRGADCAAS
AAVKTKTHQEEEDDDDVVLVSVKPAARQTPPASSTVQKTITSFPGFQSAAQVGDPKGMHC
LLSAQLQQKKATLSSVNVAALPDKGERLRLQVKQLEDALESLSLAAATQPEPAEESGSGG
SAAGSARPVVNPFSRPGGTVLLSSAPVPGPVRHQASGSSVGTQLSQGNAQTFGADLQMHP
YYGGRMTNERLLEVKNATCEAIDHLHKSLESCPDPEDEASDPRGIKVPLLAHQRRALAWL
LWREAQNPCGGILADDMGLGKTLTMIALMLRKKMEAKKEGEKKEEKKLNSWISKSDSSIV
SSKGTLVICPASLIHHWKKEIERHVKTGRMSVYLYHGSSRERSARALADYDVVVTTYSLV
SKEIPVEKEDAYNPGKDPDHVPSRSGPLLRVTWARVILDEAHNIKNPKVQTSMAVCQLRA
RARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEYKLWKTQVDNGSSRGRERLNILTKTLLL
RRTKDQLDSMGKPLVSLPKRTCEVHQLKLSEDEQAVYDVVFAQSRSTLQNYLKRHEEKDL
DKGNTSSVNPFDKVAQEFGVSQADPARSGSRQASSTVHILSLLLRLRQCCCHISLLKKTL
DSSELQGDGIVLSLEEQLNALSLSSTPSPSGPDPKDTVALNGTRFPSQLFEETSESTKIS
AITSELMAIKEKSDDQKSVIVSQWTSMLNIIAVHLRRMGLTYGVIDGTVNPKRRMDLVEE
FNTNPRGPQVMLVSLCAGGVGLNLIGGNHLFLIDMHWNPALEDQACDRIYRVGQRKDVTI
HRFVCEGTVEDKIATLQTKKKELAQNVLSGTGSTVSKLSLADLKIIFGV
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagttaaatgtgattcacacggtagtgtgtgtatgctaaaaaccggtgtgaaa
gagggaccaaataaaggcaagagcttctatatttgcattgacaagcagggctgtgatttc
acccagcaggccagtatcgctccttcccactgtctgcatcacgaagagtcagtggtggag
ctgcaggcgctcagctacagtcaacagcagcagagccaccgactctactacagatgtgct
gtcgggaaaagagaaggtcagagatggtgtggaaacgtgccctggactgctcaagaaaaa
gaaaggagaacccctctaactgactcccagctgcagccatcctgcctcccacgtgtcaga
aatccctttaaagctcccgacaagacggacaaatcttcggagcggagacgcatgcagagc
ggtgggtgtgaagagaaagaaggggagaagaaaactgggagagcaagtcataacgcagaa
ggaagacaacgctctcagaaggaaaatacggaggccctaggcgcagaggaaagaaagtcg
agcgcacctgaaacatatcaaggtaagctgctcccagcaggaatgaaggtaaagaagagg
atttcaagcgaggaaagcaagtccaaagctgatggcgttgatagaacagcagttaggacg
caagacaaggctgggaaaagttctgcagaggagggagagtcagaaaaaaccatttccact
cgagacattgagaaaatcagtcaaatgtgccccgacctactcaaaaatataccacaggaa
gcaaccaatagtcaaacctcttccttgagtcagaatgagcccacagcggagaagagcgtt
gctgaatctgtccccggcagaagcagccagtcgtccagaggagccgattgtgccgcttca
gcggctgttaagaccaagacccaccaagaagaggaggatgacgacgatgtagttttggtt
tcagtgaaaccggcggctcgccaaactccccctgcttcttctacggtccaaaagacgatc
accagctttccagggtttcagtcggccgcccaggtgggcgacccaaaggggatgcactgt
ctgctcagtgcccagcttcaacagaagaaggccacgctgtcttcggtgaacgtggcggct
ctgccagataaaggagagaggctgaggttgcaggttaaacagctggaggacgctctggag
tctctaagcctcgctgctgctactcagcccgaacccgcggaggagtccgggagcggcggc
tctgctgccggctccgctcggcccgttgtcaatccattcagcaggccgggcggaaccgtc
ctgctctcttccgctccagtaccagggccggtccggcaccaagcttccggcagctctgtg
gggactcaactgagccagggaaacgctcaaacctttggagcagatctccaaatgcaccct
tattatggcggcaggatgacgaatgagcgcctgctggaggtgaagaacgccacctgcgag
gccatcgaccatcttcacaaatctctggagtcgtgtccggatcccgaggacgaagcttca
gaccccagaggcatcaaggtgccactcctggcccatcagaggagagctttagcctggctg
ctctggagggaagctcagaatccatgtggaggaattctggctgacgacatgggcttgggc
aaaacactgaccatgatcgctctcatgctgagaaaaaagatggaggccaaaaaagaagga
gaaaagaaagaagagaagaagctgaactcctggatctctaaaagcgattccagcattgtg
tcttctaaaggcactctggtcatctgtcccgcctccctgattcaccactggaagaaggag
attgagcggcatgtcaagacgggcaggatgtcggtgtatctgtaccacggttccagccgg
gagagaagcgccagagcactggcagattacgacgtggtcgtgaccacatatagtttggtc
tctaaggagattcctgtcgaaaaggaagatgcttataatcccggcaaagatcccgatcat
gtgccgtcacgttcaggccctctgctgcgagtgacctgggctcgtgtgattctggacgaa
gcccacaacattaaaaaccccaaagtgcagacctccatggccgtctgccagctgagagcc
cgcgcccgctgggctgtcaccgggacccccatccagaacaacctgctggacatgtactct
ctgctgaaattcttgcgttgttctccattcgacgagtacaagctgtggaaaactcaggtg
gacaacggctccagcaggggcagggagagactcaacatcctgacgaaaactctgctgctg
cgacgcaccaaagatcagctggactccatgggaaaaccgctggtgtctcttccgaagcgg
acctgcgaagtgcatcagctcaaactctctgaggacgagcaggctgtgtacgatgtggtg
ttcgctcagtccaggtctactctgcagaactatctgaagagacatgaagagaaggatttg
gacaagggaaacacgtccagcgtcaatccgtttgataaagtggcccaagagttcggtgtg
tcccaggctgaccctgccaggtcgggctctcgccaggcatccagcaccgttcacatcctc
tctctgctgctgcgcctcagacaatgctgctgccacatctctcttcttaaaaagacgttg
gactcgtctgagctgcagggtgacgggatcgtactgtcgctggaggagcagctgaacgct
ctgtcgctctcttcgaccccgtcgccatcgggccctgaccccaaagacaccgtggccctg
aacggcacccgctttccctcacagctgtttgaggagaccagtgaaagcaccaaaatttct
gcgatcacatctgagctcatggcgataaaagagaagagtgacgatcagaaaagcgtgatc
gtgtctcagtggaccagcatgctcaacatcatagcagttcatctgcggcggatgggcttg
acttacggggtcatcgacggcaccgtgaaccccaaacggcgcatggacctggtggaggag
ttcaacacgaaccctagaggacctcaggttatgctggtttctctttgtgctggtggggtt
ggactcaaccttattggagggaatcatctcttcctcattgacatgcactggaatccagcc
ttggaggatcaggcctgtgaccgaatctatagagtaggacaacgtaaagacgtcaccatt
cacaggtttgtgtgtgaaggaaccgtagaggacaagattgcaacgctgcagacgaagaag
aaagagctggcccagaatgtgctttcaggaacaggaagcacagtctctaaactctcattg
gccgatctcaaaatcatttttggtgtttag
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