Xiphophorus couchianus (Monterrey platyfish): 114147907
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Entry
114147907 CDS
T05908
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114147907 (tbc1d4)
Membrane trafficking [BR:
xco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
114147907 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
114147907 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
114147907 (tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
PTB
DUF4249
DUF4600
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
114147907
NCBI-ProteinID:
XP_027878475
LinkDB
All DBs
Position
7:complement(10237816..10276692)
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AA seq
1247 aa
AA seq
DB search
MEIQEEKESRTDKRFALTYVGWCSLDRRTTLPMLPWLVAEIRRRSERGDCGPVMQPREVQ
LLLNTPFVRCVPSNSSNSSVFIFEHKAQLISRFIHNSNDLTCFSYLLRGQPDNPESEMSC
HVFKACDPNQVPEVISSIRQVSKSALKEDAKPKQEADEAFYNSQKFEVLYCGKVTVGHKK
ASSTLIDDCVEKFRQHETERKRLRLLNGQRGSTETIPVDLLIAGDGDPLFTALSRTTEEP
EAPGVEDLITGICLPSSASQSSLRGSFPECILEDSGFEEPQEFRTRCSSLAGSLQRKPGE
GVIMGPTRRRHASAPNNVQPSDSDKNRTMLFQVGRFEVNLISPDSKTVVLEKNFKDISSC
CQGVKQTDHFGFICRDQSESGPSQYMCYVFQCANESLVDEVMLTLKQAFSTAAALQSNKT
PVQLCEACPMHDLHKLCERIEGLYPPRAKLAIQKYLSLLTDNEQAEIFERVQRLKPGSDQ
EENELAIMYLRQLCESKQKSHLHIGETPQNATNSTAGGDGSATGSRFKLDILKNKARTSL
TSSLENIFARGASRMRGRLGSMGSISSFERQDEESPGHSPPGSPPAFPDEELESGPQFRR
RAHTFSHPPVRKRISFESQPANQTKQAPLRRQHSVNPELLQTSHVSRTRSISEGESSFSL
PSTFSAPTFLKSFYQGSLGSLTDSGSFKSNGEGRKRTLSSCSNDSLSGGLPLTPRRVSWR
QKIFLRVASPMNKPSASMQDTDGSDATELLPLSPRASDPGLDPLRRLLSPASDQPADKKP
KKTGADYRALWKTAIHQQILLLRMEKENQRLEEASRDELHIRKTKLDYQEVCTCSKEAQA
LWERKLTAPGRTTNPQDKEDIYRAVCQGVPKSRRGEVWLLLSHQHRLQHRLPQRQQAPDT
PYYDLLKQLTAQQHAILVDLGRTFPTHQYFSAQLGAGQLSLYNLLKAYSLMDTEVGYCQG
ISFVAGVLLLHMREEQAFDLLKFLMYDLGIRRQYRPDMVSLQIQMYQLSRLLHDYHRELY
NHLEEYEIGPSLYAAPWFLTLFASQFPLGFVSCIFDLVFVQGTEVIFKVALCLLSSHERE
IVECDSFESIVDYLKTTLPTLTQTQMEQTITKVMEMDISKQLHAYEVEYHVLQDEMLDAG
PPPDDSERLDKLEKTNVQLKKQNMDLLEKLQAARQKIQTLETSVENFLSRESKLKHMIRS
LEQERATYQRTIERMRFSLPPDALTDVEMTQIKTGPNGKAKTSAKKP
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggagatccaggaggagaaggagagcaggacggacaagcgcttcgccctgacttacgtc
ggctggtgctcgctggacaggcgcaccactctgcccatgctgccgtggctggtggccgag
atccgcaggaggagcgagaggggcgactgcggccccgtcatgcagcccagagaagttcag
ctgctgctcaacacccccttcgtccgctgcgtcccctccaacagcagcaactcgtcggtc
ttcatcttcgagcacaaagcccagctgatctcgcgcttcatccacaacagcaatgacctc
acttgtttttcctacctgctgcggggccagccggacaacccggagtccgagatgtcctgt
cacgtcttcaaggcctgcgacccgaaccaggtcccagaggtaatcagcagcattcgtcaa
gtgtccaaatcggctctgaaggaagatgccaaacccaaacaggaagccgacgaggcgttc
tacaactctcagaagtttgaagtgctttactgtggcaaggttactgtgggccacaagaaa
gcttcgtcgaccctcattgatgactgcgtggaaaaatttcgccaacatgagactgaacgt
aagcgcctgcgacttctcaacggtcagcgagggtctacagaaaccatccccgtggattta
ctcatcgctggagatggagacccgcttttcactgccctcagcagaactacagaggaaccg
gaagctccaggagtagaagacctgatcacaggtatatgtctgcccagcagtgccagtcag
agcagtctgcgaggatccttccccgagtgcatcctggaggactctgggtttgaggaacct
caggagtttcgcacgcgctgcagcagcttggctggaagcctgcagaggaagccgggggag
ggagtcatcatgggtcccacgcgtcgcagacacgccagtgcgccgaacaacgtccagccg
tccgattccgacaagaaccgcactatgctgttccaggttggacgttttgaagtgaacctt
attagtccagacagtaaaacagtggtgctggaaaagaacttcaaagatatctcatcctgc
tgtcagggcgtcaagcagaccgatcattttggattcatctgccgggaccagtcggagtct
ggtcccagtcagtacatgtgctacgtcttccagtgcgccaatgagtcgctggttgacgag
gtgatgctgaccctgaagcaggccttctccaccgccgcagccttacagagcaacaagacc
ccggtgcagctctgcgaagcgtgccccatgcacgacctgcacaagctctgcgagaggatt
gagggtctttatccaccccgagcgaagctagcaatccaaaaatatctctccctgttgacc
gataatgagcaggcagagattttcgagcgagttcaaagactgaagcctgggtctgaccaa
gaggagaatgagttggcgattatgtatctaaggcagctctgtgaaagcaaacagaaatct
catcttcatatcggagaaacccctcagaatgcaacaaacagcacagctggaggagacggc
tcagccaccggcagtcgatttaaacttgatattctcaagaataaagcccgcacatccctc
accagctctctggaaaacatctttgcaaggggtgccagcagaatgcggggccgcttggga
agcatgggaagcattagcagtttcgaaagacaggatgaggagtctcctggtcactccccg
ccaggttcgcctcccgccttcccggacgaggagctggaatccgggccgcagttccgtcgg
cgtgctcacaccttcagccacccgccggtgaggaagcgcatctccttcgagagccagccg
gccaaccagaccaaacaggctccgctccgcaggcagcactccgtcaacccagaactgctg
cagaccagtcacgtgtcccgaacacgcagcatttcagagggggagtcctccttcagcctc
ccctccaccttctccgctcccactttcctgaaaagcttttaccagggttcgctgggctcg
ctgacggacagtgggagcttcaagagcaatggagaaggcaggaaaaggacgctgtcaagc
tgcagcaatgactctctgagcggaggtctccctctgaccccacgcagggtctcctggaga
cagaagatcttcctgcgggtcgcctcacccatgaacaagccatctgcatctatgcaggac
acagacggctctgatgccacggagctgctgcctctgtctccccgtgcctcggacccgggt
ctggaccctttgaggcgccttttatccccggcatctgatcagccggccgataagaagccc
aagaagacaggagccgattacagagctctctggaaaactgccatccaccagcagatcctc
ctgctgcgcatggaaaaggagaatcagaggctggaagaagcgagtcgagatgagctgcac
atccgcaaaacgaagctcgactaccaggaagtgtgtacctgctccaaggaggctcaggcg
ctctgggagagaaagctaacagctccaggcagaaccacaaacccgcaggacaaggaggac
atatacagagccgtctgccagggagttccaaagagcagacgcggggaggtctggttactc
ctttcccatcagcatcggctgcagcacagactgccccagcgccagcaagctccagacacc
ccctactacgacctgctgaagcagctcaccgcacagcagcacgccattctggtggactta
ggccggaccttccccacccaccagtacttctcagcccagcttggagcaggccaactttcc
ctctataatttgctgaaggcttactctctgatggacacagaggttggctactgccagggc
atcagctttgtggccggagtgctgctgctccacatgagggaagagcaagctttcgacttg
ttgaagttcctgatgtacgacctgggcatcaggcggcagtaccgacccgacatggtttca
ctgcagattcagatgtaccagctctccaggctgctgcacgactaccaccgggaactttac
aatcacctggaggagtacgagatcgggccgagcctctatgccgcgccttggttcctcacc
ctcttcgcctcacagttcccccttggcttcgtgtcctgcatctttgatttagtgtttgtg
cagggtactgaggtgatctttaaagtggccctctgtctgctgagcagccatgagagggag
atagtggaatgtgacagcttcgagagcatcgtggactacctgaaaactacactccccacg
ctcacacaaacacagatggagcaaaccattaccaaggttatggagatggacatctccaag
cagctgcatgcatatgaagttgagtaccacgtcctgcaggatgagatgttggacgccggg
ccgccacccgacgactcggagcgcctcgacaaattagagaagacgaacgtgcagctgaag
aaacagaacatggatctgctggaaaaacttcaagctgcaagacagaagattcagactctg
gagacgagcgtggagaacttcctctctcgggagagcaaactgaagcacatgattcgctcc
ctggagcaagagagggcaacctaccagaggaccattgaacgcatgcgcttcagcctcccc
cccgacgccctgacagatgtggagatgacccagatcaaaacaggacccaacgggaaagcc
aaaacctcagccaagaagccctga
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