Xiphophorus couchianus (Monterrey platyfish): 114147958
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Entry
114147958 CDS
T05908
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114147958 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xco01009
]
114147958 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114147958 (tra2b)
Protein phosphatases and associated proteins [BR:
xco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114147958 (tra2b)
Spliceosome [BR:
xco03041
]
Common components
Common spliceosomal components
SR proteins
114147958 (tra2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
114147958
NCBI-ProteinID:
XP_027878586
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Position
7:18575116..18581877
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AA seq
282 aa
AA seq
DB search
MSDNDKGRESRSASRSASPRAPAKSASRTPARSKDGSHHSRSKSWSRSRSRSGSHSNHGS
HKHYSHSRSRSRSGRRRSRSRSYSGERRHRSLSHSPMSNRRRHIGNRANPDPNACLGVFG
LSLYTTERDLRDVFSKYGSLADVSIVYDQQSRRSRGFAFVYFENTADAKEAKDRANGMEL
DGRRIRVDFSITKRPHTPTPGIYMGRPTYGSGGGGGGGGPGGPRRYSRDYDRGYDRGYDR
GGYDRYDDRDYYRSYRRRSPSPYYRGAYRSRSRSRSYSPRRY
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaatgataagggccgggagtctcgctcagcttccaggagcgcgagtccccgt
gcccctgcgaagtcggcgagtcgcactccagctcgttcaaaagatggatcccaccattcc
cgttctaagtcctggtcccgctccaggtccagatcaggctcccattctaaccatggctct
cataagcactacagccattcccggtcccgctccaggtccggccggcgccggtcccgcagc
cgctcctacagcggagagcgccggcacaggagcctcagtcattcccccatgtctaatcgc
cgcaggcacatcggcaatcgggctaatccagatccaaatgcttgcctgggagtgtttggc
ctgagcctgtacaccacagagagggacctgagggacgttttctctaaatacgggagcctg
gcggatgtcagcatcgtgtacgaccagcagtccaggcgctccaggggctttgcttttgtt
tactttgagaacacagctgatgctaaagaggcaaaggaccgagcgaatggcatggagctg
gacggtcgaagaatccgggtggatttctcaatcacaaaaagacctcacaccccgaccccg
ggaatctacatgggacgtcccacatatggcagtggcggtggtggcggcggcggcggtcct
ggtggtccccggcgctattcacgtgactatgaccgcggatatgaccgcggatatgataga
ggcggctatgatcgctatgatgacagggactactaccgatcatacagacgaagatctcca
tcaccatactacagaggagcatacagatctcggtcaagatcccggtcttattctcctcgt
cgatattga
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