Xiphophorus couchianus (Monterrey platyfish): 114147970
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Entry
114147970 CDS
T05908
Name
(RefSeq) fibronectin-like
KO
K05717
fibronectin 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04510
Focal adhesion
xco04512
ECM-receptor interaction
xco04518
Integrin signaling
xco04810
Regulation of actin cytoskeleton
xco04820
Cytoskeleton in muscle cells
xco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114147970
04518 Integrin signaling
114147970
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114147970
09142 Cell motility
04820 Cytoskeleton in muscle cells
114147970
04810 Regulation of actin cytoskeleton
114147970
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114147970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114147970
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114147970
00536 Glycosaminoglycan binding proteins [BR:
xco00536
]
114147970
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114147970
Membrane trafficking [BR:
xco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
114147970
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
114147970
Glycosaminoglycan binding proteins [BR:
xco00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114147970
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
114147970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Fn3_PBP1
FN3_DSCAM-DSCAML_C
Fn3_VIN3
fn2
Fn3_Dep-1_2nd
Fn3_Dep-1_3rd
NDNF
Interfer-bind
FN3_Tor_3rd
Ig_ENGASE1_C
Motif
Other DBs
NCBI-GeneID:
114147970
NCBI-ProteinID:
XP_027878617
LinkDB
All DBs
Position
7:complement(30721743..30754239)
Genome browser
AA seq
2502 aa
AA seq
DB search
MSGHSTIAGVLVALCIGSAVHSMPQGTLNNPQLYRASSVSPDGCIENGQSYNVNDQWERP
YLSGTLICTCQGVAGIKCRSKPEEERCYDKLGQKFYSVGETFESSKDGMTWDCTCIGSGK
GRISCTIANRCHDGGASHKIGDTWRRPHEGGYMLECVCLGNGKGEWTCKPVAEHCVDQAV
GTSYVVGEKWEKQYQGWMIIDCICLGEGNGLITCTSRNRCNDQDTRASYRVGDRWTKIDP
KGHQLQCICNGNGRGEMKCERHASLHTTSLGTGSHVVTNMQPVVYHPVVVPELLLEGPCK
TDSGLTYFNGQRWIKNQGNKKMICTCMENGVSCDQWDGPAPVYGGNSGGLPCVFPFVHKG
KTYHSCTSEGRSDGQLWCSTSSDFDKDQKYSFCTEKNVVLMTRGGNSNGALCQFPFLYNG
RNYTDCTSDGRRDGMKWCGTTTNYDADHRFGFCPMTANEEVCTTSEGLMYRVGDQWDKRH
DVLGHMMRCTCVGNGRGEWSCIAYSQLKEHCLVDGVTYEVNQTFTKEHEEGYMMNCTCFG
QGRGRWKCDAIDHCQDPETRTIYQVGESWDKVIQGVMYKCICYGNGVAEHGCEPQLSYPG
GHRPVQVIIAESGGQQNSHPVQWNTPSSAHVTQYILKWRVKDTISPWMEVAIPGHLNSYT
ISGLKPGITYEGQLISVLRFGHREITRFDFTTTYGSLIPSYGEATPPPPIVELSESVTEI
TSNSFVVSWVSASDTVSGFRVEYELIEQGQGTGQPFVLDLPRSATSVNINELLPGRKYNV
NVYEVTEGEETNLIFTTSQTTAPDAPKEHEVEEVGDTSIVISWDRPLAPITGYRVVYMPS
EEGESTELTLPDTATSVTLSDLLPGISYNISIYAVEDSLESEPLFVQVNTTGEPLPVEVD
SPSDLQFFEVSDKKITLTWLSPATGSVSGYRVTVSPVDDSGSPQSEMTLPVHQNTYIEVT
HLNPGTLYRFTVYTIYNGKESVPLIGEHATNPDAPTDIHFNDITENRAVVLWYAPRAKIT
GYRLFLTVEGSNPIPFHLPAHLTQYTLPNLRPDTEYKVTLHSEQDNTLSVGETAIFTTDS
AMGNAPQFNTDVTDTSIVISWSPVPRIGYKLSVRPSLGGEAPRDVISESGSIYISGLTPG
VEYTYSVQPVFNGQEQGTPITRHVVTPLSPPTNLNLESNPANSDITVQWNGPNTPDITGF
RVKCTPTSGQQGNSLEEFVEAGQNSCTLENLSPGVEYNVSVVTVKDDMESTPVSTVITPE
VPKLTDLTFEGVTDTTISLRWSPLDTTVVRGYKITVVAAGESIPIFEDMVTPTTGQYTVY
GLEPGIDYDISVTTVTEHGESEPTTFTQQTSVPAPINLNFGEIRPDSLEVTWVSPQVPNT
SDINSFIIRYHPIDNEDEITETSVGGDTNRVVLRNLLPNTEYLVRVVCVYEQRESSPAVG
IKKTALDSPVGLRFSEIMTTSFTIHWQPPQSKITGYRVRYQMVSGGRAKDERLPPSRNHF
TMTGLTPDTDYLVSIYAVSGLQESLPLSGTQKTISDAPTDLEVLDSSPTSITVRWAAPPV
TVRYYRITHGESGGHTKEFTVPGTKSTATISNLRPGTDYTVTVYAVTGRGDSPASSIPIY
VTHRTGVDSPSEMEVTNVNDNSITVRWSPAQGPIKGYRVTGAPRNGQGMSFTEVVAPDQT
EFTFSGLMPTAEYIFSVNALGQNGESSPLVVNAVTNVDRPKDLTFTDVDSTSLRITWDSP
EGFVTSYRVLYSSSEEGERELYPSPRGDAESAIIRGLQPGTEYTVKVIAMHDGTTSTPLI
GTQATAISPPTNLQFSDVGPTSFTMRWTAPGQGNLITGLPGLTGYHVVVNPKKKSGPTKE
INLAPDTTQAHIPGLMIATTYEVYVYALKNSLTSRPVQGEVTTLENISPPRRVRISEVKD
SSITLTWRTKGDTISGFLIEAMPTTTSPSNIPIQRTIGPESRTYVLTGLEPGTTYKVNLY
TLKGNGRSIPFTLTATTAQPTVIPPTNIRFTSLNPTSISFMWEPSHSPRITGYYVTYEEA
GGLPRELTPRPHAGMSFATIDGLKPGTEYVIKIVALQNSLRSTPLVGKARTQPAADYSTV
HQMLVPELPQLPHRPSTDILDVPETLNEKIFDSNYVHLAGTSGQNQPGQQGQHIYTEYQN
LGPNVGLPSPYGGPKEGQRPTLREPLIYIPVAGPDGNRVPLVKVSDTPLPGLAFGFPDNE
TELPQEAKTITAISWQPVPETTEYEVSCSPITDLEEGGIQMRLPGTSNSATLIGLTSGAS
YNVVVEAVKDGDKQTVLEEVVTVGNAVPDDNPITTIGDVCYDTFTHTYHKMGSEWERMSE
TGFKLWCRCLGLGSGHFRCDSSKWCHDNGNNYRIGEKWDRRAENGHMMSCTCLGNSKGEF
KCEPHGSTCYDDGKMYQVGNQWQKEYMGAICTCTCYGGQQGWRCENCRRPGGQTNVEAEV
LQPGGLDAFQRYRENALRKLNIQCPIECLNPELLADAQSPLE
NT seq
7509 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtcacagcaccatagccggggtgctggtcgctctgtgcatcgggagcgcggtg
cactccatgccccaggggacgctcaataacccgcagctgtatcgcgcttcctcggtctct
ccagatggctgcatagagaacggtcagtcatataatgtaaacgaccagtgggagcgtcct
tatttgagtggcaccctgatctgtacctgccaaggagttgctggtattaagtgcagaagc
aaaccagaagaggaaaggtgctacgacaaactcggccagaagttctacagcgtgggagaa
acctttgagagctcaaaggatggcatgacctgggactgcacgtgtattggatctggaaaa
ggcagaatcagttgcaccattgcaaatcgctgtcatgatggtggcgcctcccataagatc
ggagacacctggaggagacctcatgaaggaggctacatgctggagtgtgtctgtctgggt
aacgggaagggagaatggacctgtaaacctgttgctgagcattgcgttgatcaggcggtt
ggaacatcctacgttgttggggagaagtgggagaagcagtaccaggggtggatgataatc
gactgcatttgtctgggagagggaaatggactgatcacatgcacatccagaaatcgctgt
aatgatcaggacactcgggcctcataccgtgttggagatagatggaccaagatagaccct
aaaggccaccagctccagtgtatctgcaacgggaacggccgtggggagatgaagtgtgaa
cgacatgcctcacttcacaccactagcctgggcactggctctcatgtggtaaccaacatg
cagcctgtggtctaccaccctgtcgttgtaccggagcttctattggagggaccctgcaag
actgactcaggactgacgtacttcaacggacagcgctggatcaagaaccagggaaataaa
aagatgatctgtacctgcatggaaaatggagttagctgcgatcagtgggatggaccagct
ccagtgtatggtggaaactctggaggtcttccctgtgtgttcccttttgtccacaagggg
aagacgtaccattcctgcacctctgagggccgcagtgatggacagctgtggtgttctact
tcttctgactttgacaaagaccagaaatattctttctgtacagagaagaatgtggtcttg
atgacacgaggtggtaattccaacggggctctgtgtcagtttccattcctctacaatggc
cgaaactacactgactgtacctcagatggtcgaagggatggcatgaagtggtgtggcaca
acaacaaactatgatgcagaccatcggtttgggttctgtccaatgactgcaaatgaagaa
gtgtgcacaacaagcgaggggctgatgtaccgcgtaggtgaccagtgggacaagagacat
gatgtcctaggtcacatgatgcgttgtacctgtgtcggcaatgggagaggggaatggagc
tgtatcgcttactcccagcttaaagagcattgtcttgtggatggtgtgacctacgaggtt
aaccagactttcaccaaagagcatgaagaaggatacatgatgaactgcacctgctttgga
cagggccgcggtcgctggaagtgtgacgcaattgaccattgccaggacccagagacaaga
actatctaccaggttggagagtcttgggacaaagttatccaaggcgtcatgtataaatgc
atttgttatggcaacggtgttgcggagcatggatgcgagccccagctgtcatatcccggt
ggccatcgtcctgttcaggtaatcattgcagagtctggaggccaacaaaattcccatcct
gtccagtggaacaccccatcatcagcacatgttacccagtacatcctgaaatggagagtg
aaagacacaattagtccctggatggaggttgcgattcctggtcatcttaactcctacacc
atctctggcctcaaacccgggatcacatatgagggccagctgatcagtgtgcttcggttt
ggacacagagagattacgcgcttcgacttcaccactacctatggatcattgattccatca
tatggagaagccacccctcctccccccatagttgagctctccgaatcagtgacagaaatt
acctccaacagcttcgttgtctcctgggtttctgcctccgacaccgtgtccggtttcagg
gtggagtatgagctgattgaacagggtcaaggaactggacaaccttttgtcctagatttg
ccccgttcagccacctcagtaaacattaatgagcttctgccagggaggaaatataatgtt
aacgtctacgaggtcacagagggagaagagactaacctcatttttactacttcacaaaca
actgcacctgatgctccgaaggagcatgaagtagaggaggttggagatacttccattgtg
atcagttgggatagacccctggctcccatcactggatatcgtgttgtgtatatgccatca
gaggagggtgaaagcacagagctgacccttcctgatactgcgacgtctgtgacgctgagt
gacctcctgccaggaatctcctacaacatcagcatctatgctgtggaagacagtttggag
agtgaacctctctttgttcaagtcaacactactggggaaccactgccagttgaagtggat
tccccatctgacttgcagttctttgaggtgtctgacaagaaaatcactctgacctggttg
agtccagcaaccggaagcgtgtcgggttaccgggttactgtgtcgcctgttgatgattca
ggctctccacagagtgagatgactttgcctgtgcaccagaacacctacattgaagtgaca
cacctaaatccaggcacactttaccgcttcactgtctacaccatttacaacggaaaggag
agcgtaccactaattggggaacatgccaccaatcccgatgcccccacagacattcacttc
aacgacattacagagaatagagcagtagtgctgtggtatgcaccgcgcgccaaaattact
ggatatcgtctcttcttgactgtcgaaggttcaaatcccataccgttccaccttcctgcc
cacctgacacagtacaccctccctaacctgcgaccggacacagagtacaaagtcacgctg
cattcagagcaagacaatacactgagtgttggagagactgccattttcactactgactca
gcaatgggtaatgcccctcagtttaacacagatgtcacagatacctccatagtaatctcc
tggtctccagttccccgcatcggatacaagctgtcagtccgaccaagtctgggaggggaa
gctcccagagacgtcatctctgaatcaggaagtatttatatttctggtctgactcctgga
gtggagtacacctacagtgtccagccagttttcaatggtcaagagcaaggcaccccaatc
actcgacatgttgtcacgcctctgtctcctcctactaatctgaacttggagtccaaccca
gccaacagtgacattaccgtccagtggaatggaccaaacacaccagacatcacaggcttc
agagtgaaatgcactcccaccagcgggcaacaaggaaacagcctggaggaatttgtggag
gctgggcagaattcctgcaccctggaaaacctgagtcctggggtggagtataatgtcagt
gttgtcacggtgaaggatgacatggaaagcactcctgtctcaactgtcattaccccagaa
gtcccaaaactgactgacctcaccttcgaaggagtgactgacacaaccatcagtctccgt
tggtcgccgctcgacaccactgtcgttagggggtacaagatcacagtcgttgccgctggt
gagagcattcccatttttgaagacatggtcacgcctaccactggccagtacacggtgtat
ggactggaacctggaatcgactacgacattagcgttaccacagtaacggagcacggcgag
agtgaacccaccacgttcactcaacaaacctctgtaccagcccccattaatttgaatttt
ggtgaaatcagaccagacagtcttgaggtcacatgggtttctcctcaagttccaaacacc
tccgacattaacagtttcatcattagataccaccccattgataatgaagatgaaattaca
gaaaccagtgttggaggcgatacaaatagagtggtgctaagaaatttgctgcctaacaca
gagtatctggtgagagtggtgtgtgtttacgagcagagagagagctcacctgctgttggt
atcaagaaaacagctctggattcgccagttggcctgcgtttctctgaaatcatgacaacc
tccttcaccatccactggcaacctccccaaagcaaaatcactggataccgagttcgctat
cagatggttagtggtggaagagccaaggatgagaggttaccaccttcaagaaaccacttt
acgatgactggtctcactccggatactgactacttggtcagcatctatgctgtgagcgga
ctacaagagagcctcccactcagtgggacacagaaaacaatttctgatgctccaactgac
ctggaagtgcttgactcctccccaacaagtatcactgttcgttgggccgcaccaccagtc
acagtgcgctactacaggattactcacggagagtcaggtggtcacactaaggagtttact
gtgcctggcaccaagtcaactgctacaatcagcaatttaaggcctggtactgattacact
gtcacagtctatgctgtgacaggtagaggagacagccctgcttctagcattcccatctac
gttacacacaggactggcgtggactctccctctgaaatggaggtgacaaatgtgaatgac
aacagcatcacagtgagatggagtccggctcagggtccaatcaaaggttacagggtgact
ggggcccctagaaatggacaagggatgtcattcactgaagtggtggctccagatcaaacc
gagttcactttctcaggcctgatgccgactgcagaatacatttttagtgtgaatgccctc
ggtcaaaatggcgagagctctcctttggtggtgaatgctgtgacaaatgtggaccgtccc
aaggaccttaccttcacagacgttgattccacttccttgcggatcacctgggatagtcca
gagggatttgtcacatcttaccgtgtcttgtactcaagttcggaggaaggcgagagagag
ttgtatccatctccaagaggagatgctgagtcagccattatcagaggactacagccggga
accgaatatacagtgaaggtcattgccatgcatgatggtacaaccagtactcctctgatc
ggtacacaagctacagccatctctcctcccaccaacctccagttctctgatgttggtcca
acatcttttaccatgcgctggactgcacccggtcagggaaatctgattactggtcttccg
ggcctcactggatatcatgttgtagtaaacccgaagaagaagagtggacccaccaaagag
atcaacctggctccagataccactcaggcccatatccctggactcatgattgcaacaacc
tatgaagtctatgtgtatgctttgaagaactctctcaccagcagaccagttcaaggagag
gtcaccactctggaaaatatcagcccgcctcgacgtgtgcgtatatccgaagttaaagat
tcctccatcaccctcacttggaggacaaagggcgacaccatctctggattcttgatcgaa
gccatgcccaccaccacttctccaagcaacattcccattcagaggacaatcgggcctgaa
tcacgcacatacgttctcacaggattggagcctggcaccacctacaaggtcaatctctat
acactgaagggcaatggacgtagcataccttttacacttactgctaccacagctcaacca
acagtcattcctcccaccaacattcgctttacctcactgaatcctaccagcatctccttc
atgtgggagccatcacacagtccgaggatcaccggctattatgtcacttatgaggaggct
gggggtttgcctcgcgagctgactcctagacctcacgcaggcatgagctttgccaccatc
gatggtcttaaaccaggaacggagtatgtcattaagattgtggcactgcagaactctttg
agaagcacaccgcttgtgggcaaggccagaacccagccagctgcagactattccactgtt
catcagatgttggtgcctgaactgccacaacttccccatcggcccagcaccgacatcttg
gatgttccagagaccttgaacgaaaagatttttgactctaactatgtccatctggctggc
acaagtggtcagaaccaaccaggccagcaggggcagcacatttatacagagtatcagaac
ctgggcccaaatgttggacttcctagcccctatggtggacccaaggaaggccagagaccc
acactcagagagcccctgatttatattcctgtagccggtcctgatggaaacagagtaccc
ctggtcaaggtgagcgacaccccactgcctggtctcgctttcggcttccctgacaacgaa
acggagctaccccaagaagcaaagacaatcacagccatttcctggcaacctgtccctgaa
accactgagtatgaggtgtcctgcagcccaattacagacctggaggaaggaggcattcag
atgcgcctgccaggcacctccaacagcgccaccctgatcggactgacttctggagcatcc
tataatgttgtcgtagaggctgtgaaggatggagacaaacagacggttctggaggaagtt
gttactgttggcaatgcagttccagatgacaatcctattaccaccattggagacgtgtgc
tacgacacattcacgcacacgtaccacaagatgggctctgaatgggagcgcatgtccgag
acgggcttcaagctgtggtgccggtgcctggggctcggcagtggtcactttaggtgtgat
tcatccaagtggtgccatgacaacggcaataattaccgcattggagaaaagtgggatcgt
cgtgctgagaacggtcatatgatgagctgcacctgtctgggcaacagcaaaggagagttc
aaatgcgaaccacatgggtccacttgctatgatgatggaaaaatgtaccaagttgggaac
cagtggcagaaggaatatatgggtgccatctgtacttgtacctgctatggaggacaacag
ggctggcgatgtgagaactgcagaaggcctggaggacaaaccaatgtggaggctgaggtc
ttgcagcctggtggcttagatgccttccagcgctaccgggaaaatgctctacgtaaactg
aacatccagtgtccaattgaatgtttaaatccagagctgctagcagatgcgcaaagcccc
ttagagtag
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integrated database retrieval system
