Xiphophorus couchianus (Monterrey platyfish): 114147998
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Entry
114147998 CDS
T05908
Name
(RefSeq) ras-related protein Rab-5B-like isoform X1
KO
K07888
Ras-related protein Rab-5B
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04137
Mitophagy - animal
xco04144
Endocytosis
xco04145
Phagosome
xco04148
Efferocytosis
xco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114147998
04145 Phagosome
114147998
04137 Mitophagy - animal
114147998
04148 Efferocytosis
114147998
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114147998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114147998
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114147998
04031 GTP-binding proteins [BR:
xco04031
]
114147998
Membrane trafficking [BR:
xco04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
114147998
Endosome - Lysosome transport
114147998
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114147998
Exosomal proteins of other body fluids (saliva and urine)
114147998
Exosomal proteins of colorectal cancer cells
114147998
Exosomal proteins of melanoma cells
114147998
GTP-binding proteins [BR:
xco04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
114147998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
114147998
NCBI-ProteinID:
XP_027878673
LinkDB
All DBs
Position
7:3092540..3099483
Genome browser
AA seq
278 aa
AA seq
DB search
MEPVVGINFTKVKVFSFAQRKTPEEHKDQASPSNECLLGRPLGSLLEQRSREEAQPSPAQ
VGMSSRGSGSRSNGSLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAF
LAQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKE
LQRQASPNIVIALAGNKADLAEKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAI
AKKMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgttgttggaattaacttcacaaaagttaaagttttttcttttgcgcaaaga
aaaacaccagaagagcacaaagatcaagccagccccagtaacgagtgtctacttgggagg
ccactcgggtcactgttagagcagcgttccagggaggaggcccagccgtctcctgcacag
gtcggtatgagctccagggggagcggcagccgatccaacggctcgctaccgcagaccaag
atctgccagttcaagctggtgctgctgggggacatggctgtgggcaagtccagcctggta
ctacgcttcgtcaagggacagttcgacgagttccaggagacgactataggagctgcgttc
ttggctcagtcggtgtgtttagacgacaccacagtgaagtttgagatctgggacacagca
gggcaggagcgataccacagcctggcccccatgtactaccgcggagctcaggctgccatc
gtcgtctttgatatcactaaaccggagacctttgagagagctaaggcctgggtgaaggag
ctgcagaggcaggccagtccaaacattgttatcgctctggctggaaacaaggccgacctt
gctgagaaaagactggtagaatatgaggaagcccagacatatgctgaggacactggtctg
ctgttcatggagacgtctgccaagacagccatgaacgtcaacgagcttttcttggctatt
gcaaaaaagatgccaaaaacagacacgcagaacccaacacacgcagcacgacatcgggga
gtgaacctccaggatccagatgcccactccacccgagcctgctgcggtgggaactaa
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