Xiphophorus couchianus (Monterrey platyfish): 114148001
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Entry
114148001 CDS
T05908
Name
(RefSeq) aryl hydrocarbon receptor-like isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114148001
Transcription factors [BR:
xco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
114148001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
bHLH_NPAS4
HLH
bHLH_HIF1A
PAS_9
Motif
Other DBs
NCBI-GeneID:
114148001
NCBI-ProteinID:
XP_027878677
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All DBs
Position
7:1528004..1573572
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AA seq
966 aa
AA seq
DB search
MFNNPGTYANKKRKKPVLKQKKVADNNEVIKSNPSKRHRDRLNGELDRLMELLPFPDEVR
SRLDKLSVLRLSVGYLRVKSYFKASMKNGNGSRVPLGVNGQNMDSTGFSEGELLLQALNG
FVLVVTSEGMVFYTSPTIKDYLGFHQSDVVHQSVFELIHTDDRAMFREQLHFALNPPPVA
SDADFSQNCGNAVMYNPEQLPPDNSSFLERSFFCRFRCLLDNSSGFLALKFHGRLKYLHD
QNFSRDSENCKSIQLALFAIAVPVQSPSIVEIRAKLLLFQTRHKLDFTPTGVDSRGKIIL
GYSETELCMKGSGYQFIHAADMMYCADNHIRMIKTGESGLTVFRLLSKSNGWIWVNSNAK
LIYKGGRPEFIIAYQKAITNAEGEEYLRQRRLQLPFSCATGEAILYSTGPTMDIPQLQFD
KMFDSRNTKRDVPPTSLLDCFMSQDESMYSQAVDTPLPVDQVFMDTHALVAVASNEWQEK
NSSEVPAEPLLVKEEAKQSVLAVVNSLEKLTHSGDFEDILGNLEVDDSELMELENCFKRF
HQEEDPQRSSGSDLDNFITDEIIDFIDSVFKEKGGECLNSLTSSCLTEVNNFSSSELCEP
QLFHTPDPGCSYSLVSSCYEHLDDSVLSGQSLAESAPDSVRRSRSHKQSQQGHTDSSLPS
LQQLQLHDIFSPAIELPALAAPNNSVSEAFPSTQPCQKQQASIMPAGCSQGSSAQAQQLL
QLGSSMEGPELATGQILHNSAQHLSNRVPGVKTVLPPTIPYSNFTSTPPGGCDPKFLQKG
LVCENHSAHVQQWPQSQQQTLPHAGIIQNGHESMSTFQSQHPGSQVFPSSGFCPESVSRL
RHLEQGGLGTAGSQDLHSSCMFQQHFSSNPAGVKRLSHYGPPDLNGANVTLDQSSSYLQW
SHSELPVGPSAINQEMANIGPLAPGMAPAENSCNVQHYLDSNTQTQQNSRVSAQAQGLFI
NPALME
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataatccggggacgtacgccaacaagaagaggaagaagcctgtcctcaagcag
aagaaggtcgctgacaacaatgaagttattaaatcgaacccttcaaagcgccaccgggat
cggctgaacggggagctggaccggctgatggagctgctgcctttccctgatgaagttcgc
tcccgcctggacaagctctctgtcctgcgcctgagcgtgggatatctcagggtcaagagc
tactttaaagcttccatgaagaacggtaatggcagccgggtgcctctgggggtcaatggg
cagaacatggactccaccggcttctctgaaggagagctgctgctgcaggcgctgaacggc
tttgtgttggtggtgacgtctgaaggaatggtgttttacacctctcctaccatcaaagac
tacctgggcttccatcagtcagacgtggtccaccagagtgtgtttgagctcatccacact
gacgaccgagccatgttcagagagcagctccactttgccttaaaccctcctccagttgcc
tcagatgcagacttctcccagaactgtggaaatgcagtgatgtacaacccagagcagctc
cctcctgacaactcctccttcctggagaggagctttttctgtcgcttccgttgtctcttg
gacaactcctccggcttcctggccctgaagttccatgggcgattgaagtacctccatgat
caaaacttttccagggacagtgagaactgtaaaagtatccagctagctctgtttgccatc
gctgtgcctgtccagtctccgtcaattgtggagatcagagccaaactgctcctcttccag
acaaggcacaagctggacttcacacccactggcgttgacagcagggggaagataatcctg
ggttattctgagacagagctgtgtatgaaaggctcaggctaccagttcatccatgccgct
gacatgatgtactgtgctgacaaccacatccgcatgattaaaacaggagagagcggtctg
actgtgttcagactgctcagcaaatccaacggctggatatgggtgaactctaacgccaaa
ctcatctacaaaggagggagacctgagttcatcattgcataccagaaagctataaccaac
gctgagggagaggagtacctgagacagcggcggctgcagctgcccttcagctgcgccacg
ggagaggccattctctacagcactgggcccaccatggacatcccgcagttgcagtttgac
aaaatgtttgacagcagaaataccaagagggacgtgccccccacctccctactggactgc
ttcatgagtcaggatgaaagcatgtacagccaggcggtggacacccccttacctgtggac
caggtgttcatggacacccacgctctggtcgctgtagccagcaacgagtggcaggagaag
aactcgtcagaggtgccagctgaacccttgctggtgaaggaggaggccaagcagtcagtg
ctggctgtagtaaacagcctggagaagctgactcacagcggagactttgaggacattctg
gggaacctggaggtagacgattctgagctgatggagttggaaaactgctttaagaggttc
caccaggaggaggatcctcagagaagttctggctcggatctggacaacttcatcaccgat
gagatcatagactttattgactcagtgttcaaagagaaggggggggagtgcttgaacagc
cttacctcgagctgccttacagaagtcaacaatttctcatcctctgaactgtgtgagcca
cagctcttccacactccagaccccggttgttcttactccctggtgagcagctgctatgaa
cacctagatgactctgtgctttcaggccagagtctggctgagtccgctccggactcagtg
agacgcagcaggagccacaagcagtcccaacagggtcacactgacagcagcctgccgtcg
ctgcagcagctgcagctgcatgacatcttcagcccggctatagaactcccagcgctcgct
gcacccaacaactcagtgtcagaggccttcccttctacccaaccctgccagaagcagcag
gcatccatcatgccagccggatgttctcagggcagttcagctcaggctcagcagctcctg
cagctgggaagcagcatggagggaccagaactagcaactggccagatcctgcacaattct
gctcaacatctgagcaacagagtacctggtgtaaaaactgtcctgccacccacgattcct
tatagcaacttcacctccacacctcctggtggctgtgatccaaagtttctgcagaagggt
ctggtgtgtgagaaccacagcgctcatgtgcagcagtggcctcagagccagcagcagacg
ctgccgcatgctggcatcatccagaacggacatgagtccatgtccacattccagagccaa
catccagggagccaagtattccctagttccggcttctgtccagaaagcgtcagcagactg
agacacctggagcaagggggtctggggacagccggcagccaggacctccacagcagctgc
atgttccagcagcacttctcctccaacccagcaggggtaaaacgtctatctcactatggt
cccccagacctcaacggggccaatgtgactctggatcagagttccagctacctacagtgg
agccacagtgagcttccagtgggcccgtcagccatcaaccaggagatggccaacatcggc
cctctggcccctggcatggcccctgcagagaactcctgtaacgtgcagcactacctggac
agcaacacacagacacagcagaacagcagagtctccgctcaggctcaaggacttttcatc
aatcctgctctcatggagtag
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