Xiphophorus couchianus (Monterrey platyfish): 114148014
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Entry
114148014 CDS
T05908
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114148014
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114148014
Enzymes [BR:
xco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114148014
Peptidases and inhibitors [BR:
xco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114148014
Ubiquitin system [BR:
xco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114148014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
114148014
NCBI-ProteinID:
XP_027878700
LinkDB
All DBs
Position
7:complement(8959596..8995800)
Genome browser
AA seq
2632 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPDEQGQGEGPP
QLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMAL
NPHCKFHIYNGTRPSETVPAGAQLADDELYARPPDPRSPKGWLVDLINKFGTLNGFQILH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRF
VIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNA
SKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYS
CSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPINIQTNL
VSQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQLSKEEQAEFDPQTVRPG
SRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLM
GDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDD
LELIGLDYLWRVVIQGSDDIANRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKA
SYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKH
ITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEIVDPAD
DRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESC
LPGVIMSLHPRYISFLWQVADLGCNLNMPQLRDGARVLMKLMPPDNTTVENLRAVCLDHA
KLGENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPL
VLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNADGNIPVS
PINQATHDQALVLQSALQNIPNPTSECMLRNVAIRLAQQISDENFFQASKYIPDICVIRA
VQKIVWASGCGTVQLVFSNNDEISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFALMPT
ALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVL
GSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGETG
VEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMKSG
EFPTEQAIPVCSTPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCETLTEWEYLP
PVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEKQE
NESNVDPRDEVFSYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGF
WKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPPMLSKVLGGSFADQKICQGC
PHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIK
KLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQVI
QQNEPSEPTPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTE
CKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDSELVK
YISELNLSSTKPHQVKMPSVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNP
PPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKLVRGPASDWYDALCILLRHSKNVRY
WFAHNVLFAYPNRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPCPSPTASPGSSTQG
CDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVPATFM
LVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSSRMQSSINGNPPLPNPYGDTNLTA
PVMPVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVA
YSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQ
CIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPV
QSNETSNGYFLERSHSARMTLAKACELCPEELKCTQESPGKEPDEQEAPDDQDSSPPEDT
SLYPHSPGTTQFQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPTQTPTPGPGTAPS
SGPRAQETWDGTEEVAPAPAPAPAPALAPAPVPASAPASTSTSTPAPAPPKE
NT seq
7899 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctccggtggggggcaacgacagtcagggccagggccag
gcacctgatgctcagagccaacccccactgccacagaaccagacttcatctcctaattca
tctaatgagaactcccccgtgagcccaccagatgagcagggccagggcgaaggcccccct
cagctggaagaggaagagcctgcttttcctcacactgacttggcgaagcttgatgacatg
attaacaggcctcgatgggtggttccagttttgccaaaaggagagttagaagtcctcttg
gaagctgctatagacctgagtaaaaaaggactggatgtgaaatgtgaggcatgtcagagg
tttttccgggacggtctaaccatttccttcacaaaaatcctgacagatgaggcagtcagt
ggctggaagtttgagatacataggtgtatcattaataacacacaccgattggtggagttg
tgtgtggccaagctgtctcaggactggttcccgctactggagttgctggccatggccctc
aatccccactgcaagttccacatttataacggcacacggccttctgagaccgtccccgct
ggagcccagctggccgacgatgagctctacgctcgtccgcctgacccgagatctcccaag
ggctggctggttgatttaataaacaaatttggcacgttaaacgggtttcaaattttgcac
gaccgcttcatgagcggccaagcactgaacgtccagatcattgctgcacttatcaagcct
tttggccagtgttatgagttcctcacgttgcacacagtaaagaagtacttccttccagtc
atcgagatggttccccagtttctagagaacctcacagacgaggagctcaagaaagaggcc
aagaatgaagccaaaaacgacgcactgtcaatgataatcaagtctctgaagaatctggct
tctcgtgtaccagggcaggaggagacggtcaagaatttagagatttttaggttaaaaatg
attcttaggttattacaaatttcttcttttaacggcaaaatgaatgcactaaacgaagtt
aacaaggtgatatccagcgtctcctactacactcatcggcataaccctgaggaggaggag
tggctgaccgcagagcgcatggcggaatggatccagcaaaaccacatcctttctattgtg
ctgagggacagtttgcatcagccgcagtatgtcgagaagctggagaagatccttcgcttc
gttataaaagagaaagctcttaccatgcaggacttggacaacatctgggctgcacaggct
ggtaagcacgaggctattgtgaagaatgtccatgatctcttggccaagctggcgtgggac
ttctcacccgagcagctcgatcatcttttcgactgcttcaaggcaagctggaccaatgct
agcaagaagcagcgtgaaaaactgctcgagctaatccggcgcttggccgaggacgataag
gacggtgttatggcccacaaggtcctcaacctgctctggaacctggcgcacagcgacgac
gttcctgtagacatcatggatcaggctcttagtgctcacatcaagatattggactatagc
tgctcacaggacagagacacgcaaaagattcagtggattgatcgcttcatagaagagctt
cgtaccaatgacaagtgggttatccctgccttgaagcaaatcagggaaatctgcagcctc
tttggagaagctcctcagaacctgagaaagaaaatgccaattaacatacaaacgaactta
gtgagtcaaacgcagagaagccctcatgtgttttaccgccatgacctgatcaaccagctg
cagcacaaccacgctctggtcaccctggtggctgagaatctctcagcctacatggagaca
atgaggcagctgtccaaagaagagcaagcagagtttgaccctcaaacagtcagaccggga
agccgctacagtcatgtccaagaagtacaggagcggcttaactttctgaggttcctatta
aaagacggccagctgtggctgtgtgctcctcaggcgaagcagatatggaagtgcctggct
gagaacgctgtgtttctgtgcgaccgtgaggcctgcttcaaatggtactcaaagctgatg
ggggacgagccagacctagacccagacatcaacaaggacttctttgagaacaatgtgcta
cagttggatccgtcgcttctgacagagaacggcatgaagtgctttgagaggttcttcaag
gccgtcaactgcagggagggcaagctggtagcgaaacgcagggcctacatgatggacgac
ctggaactaattggcttggactacctgtggagggtggtgattcaaggaagtgacgacatt
gcaaaccgagccatagacctgctgaaagaaatctacaccaatctcggaccaaaactgcaa
gtcaaccaggttgagattcatgaagatttcatccagtcttgtttcgaccgtctgaaggcg
tcttatgacaccctgtgtgtgttagatggagacaaagacagcattaactgtgctcggcag
gaggccatccgcatggtgcgggttctcactgtgcttaaggaatacattaatgagtgcgac
agcgactaccatgaggagaggactatactgcctatgtcgagagctttccggggcaagcat
atcacactgatcgtccgtttcccgaaccaaggacgtcaggtggatgatttagacatctgg
tcacacaccaatgacaccatcggttcggtccggcggggaatcctaaacaggataaaggcc
aacgccgcacacacgaagattgagctgtttattggtggggagatcgttgatcctgctgat
gacaggaagctgattggacagcttaatttgaaggacaaaacgctgatcacagccaagctg
acccaggtgagtgccaacatgccctccagcccagacagctcatccgactcatccactggc
tcccctggtaaccacggaaaccactacagtgatgggcccaacccagaagttgagagctgt
cttcctggtgtgattatgtcgctacacccacgctacatctcctttctgtggcaagtagcc
gacctcgggtgcaacctcaacatgcctcaactaagagatggagctcgagttctcatgaag
ctcatgcctccagataacaccacagtggagaatcttagagctgtgtgtttggaccacgcc
aagctaggagagaacagtctgagtccgtcactagactcccgtttcttcggcccatcacct
tcacaagtgctctacctcattgaggttgtgtatgctttgctgatgccagctagtgccact
ctgggtgaggatgctagtgacttccagtacaacttcctgaagagcggcggtctgccactg
gtgctaagcatgctcaccaggaacaacttcctcccgtctgcggacatggagacgcgccga
ggcgcttacctcaatgctctgaagatcgccaagctcctcctgactgcggtcggcttcggc
cacgtgaaggctgtggccgaggcctgccaacccaacgctgacggaaatattcccgtctct
ccgataaatcaggcgactcacgaccaggcgctggttcttcaaagtgccctgcaaaacatt
cccaaccctacctctgaatgtatgttgcgcaatgtagctatccgcctggcccagcagatt
tctgatgagaatttcttccaggcatcgaagtacatcccagacatttgcgtgatccgagca
gtgcagaaaatcgtgtgggcatcgggttgtggcacagtgcagctggtatttagtaataat
gatgaaatcagtaaaatatacgagaagactaatgcagccaaggagccggatggagaagat
gagcaggtgtgctgcgaggctttggaagtgatgaccctgtgttttgccctcatgcctacg
gctctcgacacgctcagtaaggagaaggcttggcagaccttcatcatagacttgttgcta
cactgccacagcaagtctgtgcgtcagatggcccaagagcagtttttcctaatggcgact
aggtgctgcatggggcatcggcctcttcttttcttcatcaccctcctcttcacagtgctc
gggagcacagccaaagagcgagccaaacacgcaggggactacttcacgttgctccgacat
ctgcttaactacgcctacaacagtaacatcaacctgccaaacgccgaggtgctgctcaac
aacgagatcgactggctcaaacgaatacgggatgaggttaagaggacaggagaaactggt
gtggaagaaaccatcttggagggccacctcggtgtcaccaaagagcttctggccttccag
acgcctgaaaagaaatactacattggctgtgagaagggaggagcaaatctcattaaggag
ctgatcgacgacttcatcttcccagcatctaatgtttacctgcagtacatgaagagtggg
gagttccccacagagcaggccatcccagtgtgtagcactcctgcatccatcaacgccggc
ttcgagcttctggtggcgctagcagtcggctgcgtccgcaacctcaaacaaatagttgac
accctaacggacatgtactacctgggttgcgagacactgacagagtgggagtacctgcct
cccgtgggaccacgccctaacaaaggctttgttggcctgaagaacgccggtgctacttgc
tatatgaactctgttatccagcagctttacatgatccctccaatccgcaacggcatcttg
gcgatcgagggcacaggcaccgacgtggacgatgacatgtctggtgacgagaagcaggaa
aatgagagtaatgtagaccctcgtgatgaagttttcagctaccaccaccagtttgatgac
aaaccctccagtaaatcagaggacaggaaagagtacaacatcggggtgctgcgtcaccta
caggtcatcttcggtcacctggctgcatccagactgcagtactacgtcccaagaggcttc
tggaaacagttcagattatggggggagccagtaaatttgagggagcagcatgacgctttg
gagttcttcaactctttggtggacagtttggatgaagctctgaaagctttaggtcaccct
ccgatgctcagcaaggtgctgggagggtcctttgctgaccaaaagatttgtcaagggtgt
ccccatagatacgagtgtgaggagtcgtttacaacattaaacgtggacattagaaaccac
cagaacttgttggactcgatggagcaatatgttaaaggagatctgcttgaaggagccaat
gcctaccactgtgagaaatgcaataagaaggtggacacagtgaagcgtctactgatcaag
aagctgccgcctgtcctggccatccagctgaagcgcttcgactacgactgggagagggag
tgcgccatcaagtttaacgactactttgagttcccgcgggagctggacatggagccgtat
acggtagcaggcgtggccaagctggagggcgacgacgtgaacccggagaaccaggtgatc
caacagaacgagccgtccgaacccacgccgccgggcagttccaagtaccgcctggtggga
gtgctggttcactcgggccaggcgagcggcggacactactactcctacataatccagcgg
aacgggggcgacggcgagaagaaccgctggtataagttcgatgacggcgacgtgacggaa
tgcaagatggacgacgaggaggagatgaagaaccagtgcttcgggggagagtacatgggc
gaggtgttcgaccacatgatgaagcggatgtcgtatcggaggcagaagcgatggtggaac
gcctacatcctgttctacgagcgtatggactcgctggacaaggacagtgaacttgtcaaa
tatatctcagagctgaacctgtcctccaccaagccccatcaggtcaagatgccgagcgtc
atcgagtgcagcgttcgcaagcagaacgtccagttcatgcacaaccgaatgcaatacagc
ctggaatatttccagttcattaagaaacttctgacctgtaacagtgtctatttaaaccct
cctccaggacaagaccaccttctgccagaggcagaggagattgctatgatcagtgctcag
ctggctgctcggttcctcttcagcacaggttttcacacaaagaaattagtacggggtcct
gccagtgactggtatgacgccctctgcatcctgctgagacacagtaagaatgtacgctat
tggtttgcacacaatgttctctttgcttaccccaatcgcttctccgagtacttgctcgag
tgcccgagcgcagaggttcgtggggcgttttccaagctcatagtcttcatcgctcacttt
tccctgcaagacggaccgtgcccctcacccacagcttcgccaggatcctccactcagggc
tgtgataatctcagccttagtgaccatctgttgagagctgtactcaacctgctcagaaga
gaggtttctgaacatggccgccacctccagcagtactttaacctctttgtcatgtatgcc
aatctgggtctggcagagaagactcagctactgaagctaaatgttcccgccacgttcatg
ttagttgctctggacgagggtccagggcctcccattaagtaccagtatgctgagctgggc
aagctctacactgtggtctcccagcttgtccgctgctgcgacgtctcctcccgtatgcag
tcctcaattaatggtaatcctcctcttcctaacccgtacggggacaccaacctgacggct
cctgtcatgccggtgcagcagctagtggcagagattttgtttgtgcggactagttatgtg
aagaagatcattgaggactgcagcaactcggaggagacggtgaagctgcttcgcttctgc
tgctgggaaaaccctcaattttcctccactgtgctcagtgaactgctctggcaggtggca
tattcctacacctatgagctgaggccttaccttgacttgttgctacaaatcttactcatt
gaggactcctggcaaacacacaggatccacaatgtgctgaaaggcatccctgatgacaga
gatgggctatttgacaccattcagcgctcgaaaaaccactaccagaaacgggcctatcag
tgcatcaagtgcatggtggccctctttagcaactgctctgtggcatatcagatcctgcag
agcaatggtgacttgaagcgaaagtggacatgggcagtggagtggttgggggacgagttg
gagaggcggccatacacgggaaacccccagtacacatacaacaactggtcccctccagtt
cagagcaacgagacctccaatggatattttcttgagcgctcccacagtgcacgcatgaca
ctggccaaggcttgtgaactctgtcctgaagagctcaagtgtactcaggaaagcccaggg
aaggagccagatgaacaggaagcacctgatgatcaagactcgtctccacctgaggacacc
tctctgtaccctcattctcctggaaccacccagttccagcagaacaaccacccccatggg
cagccgtacaccgggcccgctgctcagcacatgaacaaccctcagcgtcccggcccagcg
tccgccccgactccaggcccgacccagactccgaccccgggccccggtactgctcccagc
tcgggcccgcgagcacaagagacctgggatggcaccgaggaggtggccccagccccggcc
ccagccccagccccggccctggccccggccccggtcccagcttcggccccagcctcaacc
tcgacctccaccccagcacccgcccctcccaaggagtaa
DBGET
integrated database retrieval system
