Xiphophorus couchianus (Monterrey platyfish): 114148030
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Entry
114148030 CDS
T05908
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A-like isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144
Endocytosis
xco04530
Tight junction
xco04810
Regulation of actin cytoskeleton
xco05100
Bacterial invasion of epithelial cells
xco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114148030
09144 Cellular community - eukaryotes
04530 Tight junction
114148030
09142 Cell motility
04810 Regulation of actin cytoskeleton
114148030
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114148030
05100 Bacterial invasion of epithelial cells
114148030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114148030
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114148030
Membrane trafficking [BR:
xco04131
]
Others
Actin-binding proteins
Arp2/3 complex
114148030
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
114148030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
WDR55
Rax2
Beta-prop_HPS5
EIF3I
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
114148030
NCBI-ProteinID:
XP_027878742
LinkDB
All DBs
Position
7:24389460..24405557
Genome browser
AA seq
356 aa
AA seq
DB search
MSLHSFGLEPLSCHAWNKDRTQIAVSPNNNVVNIYEKKGKDWHKIHELTEHSGRITGVDW
APVSNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVKWSPLENKFALGSGARLI
SVCYFEQENDWWLSKHIKKSIRSTVLSLDWHPNNILLAAGSADLHCRIFSTYIKEIEDKP
GPTAWGTKMPFGELLLEHKDCGGWVHSVSFSPGGDQLAWVAHNSSLTVVDAAQGKEVTQL
TTDLLPLLSVLYVNPTDIVAAGHDCCPYLFTYTGPHALECVKKLDIPKQTSKGSLSAMQH
FRNLDKKATEEDNNELETLHQNSIMQLCVVSGEKAKVEKYSSVGLDGAMVIWDFKD
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcatagctttgggcttgagccgctctcttgccacgcctggaacaaagatagg
actcaaattgctgtgagtcctaacaacaatgtggtgaacatttatgagaagaaaggcaaa
gactggcataagattcacgagctgactgagcacagtggacggatcacaggtgttgattgg
gcgcctgtgtccaaccgtattgtgacctgtgcctctgatcgtaatgcctatgtgtggact
ctgaaagatggtgtgtggaagcccactctcgtcctggtacgcatcaaccgtgctgccacc
tgtgtgaaatggtccccgctggagaacaagtttgccttgggcagtggagctcggctcatc
tctgtctgctactttgaacaggagaatgactggtggctgagcaagcacattaagaagtcc
atccgttcaacagttctcagtctggactggcatcccaacaacattctactggcagctggg
tctgcagatcttcactgcaggattttctcaacctacatcaaggaaattgaggacaaacca
ggccccacagcttgggggaccaagatgccttttggggagttgctgctggagcataaagac
tgtggtgggtgggtgcacagtgtctccttctcccctggtggggaccaattggcctgggtg
gctcacaacagcagcctcactgtggttgatgcagcacaggggaaggaggtaacccagcta
accacagaccttctgccactgctgagtgtcctttatgtcaaccctacagatattgttgct
gcgggtcacgattgttgcccttacctgtttacctacacaggtccacatgccctggagtgt
gtgaagaagctggatatcccaaagcagacatcaaagggcagtttgtcagccatgcagcac
ttccgtaacctggacaagaaggccactgaggaggataacaatgagttggaaactcttcat
cagaacagcatcatgcagctgtgtgttgtatcaggggagaaagccaaagtggaaaagtac
agcagcgtaggcctggatggagcaatggtgatctgggattttaaggactaa
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