Xiphophorus couchianus (Monterrey platyfish): 114148039
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Entry
114148039 CDS
T05908
Symbol
dync1i2
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04145
Phagosome
xco04814
Motor proteins
xco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114148039 (dync1i2)
09142 Cell motility
04814 Motor proteins
114148039 (dync1i2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114148039 (dync1i2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114148039 (dync1i2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114148039 (dync1i2)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
114148039 (dync1i2)
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
114148039 (dync1i2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
Dynein_IC2
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_WDR11_1st
PEHE
Motif
Other DBs
NCBI-GeneID:
114148039
NCBI-ProteinID:
XP_027878754
LinkDB
All DBs
Position
7:15656613..15681601
Genome browser
AA seq
637 aa
AA seq
DB search
MSDKSELKAELERKKLRLAQIREEKRRKEEERKKADQQQKDVSQQQDDSDLEKKRREADA
LLQSMGITPDAAVAPPPMTPAPKSAETPSETGSQDYDGAVGPRTLHWDSDPSTLQLHSDS
ELGYWTLSSLLSWRVTPKLGMAKVTQVDFPPRETVSYTKETQTPAPAQAKEEEEEEEEIA
PAQPVVENQTETLYQKEVEEEAPPHELTEEEKLQILHSEEFANFFDQSTRIIERALSEHV
DILFDYSGRDLEDKEGEIQAGAKLSLNRQFMDERWSKHRVVTCLDWSPLYPELLVASYNN
NEEAPHEPDGVALVWNMKYKKATPEYVFHCQSAVMSAAFAKFHPNVVVGGTYSGQIVLWD
NRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDS
MELVFKQSKAVAVTSMSFPFGDVNNFVVGSEDGSVYMSCRHGSKAGISEMFEGHHGPITG
IHCHTAAGPLDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFA
CVDGIGHLDLWNLNNDTEVPTASVVVEGSPALNRVRWAHTGREIAVGDSDGRVLVYEVKE
QIAVPRNDEWTRFVCTLAEINENRDDAEELAAQRLAA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgagctgaaagcggaactcgaaaggaagaagctacgtttggcacaa
atccgggaggagaaaagaaggaaggaggaggagcgaaagaaggcggaccaacagcagaaa
gacgtttcacaacagcaggatgactccgacctggagaaaaaaagacgagaagctgacgct
cttctgcaaagtatggggataacaccagatgctgcagttgcccctcctcccatgactcct
gctcccaaatcagcggaaactcctagtgaaaccggcagccaggactatgatggagccgtg
ggacccaggactctgcactgggactctgacccgtccactcttcaacttcactctgattct
gagctggggtactggacactctcttctctcctttcctggcgcgtgactccaaaactggga
atggccaaagtcacacaggtggacttcccaccacgtgaaacagtgtcctacaccaaggag
actcagacaccagcccccgcccaggctaaagaagaggaagaagaggaggaagaaattgct
ccagctcaaccagtagtcgagaaccaaactgagacactgtaccagaaagaagtagaagaa
gaagccccgccgcatgagctgaccgaggaggaaaaactccagatcctccactctgaggag
tttgctaacttcttcgaccagagcacccgcattatcgagcgagcactctccgagcacgtg
gacatcttatttgactacagcggtcgtgacctggaggacaaggaaggggaaattcaggcg
ggagcaaagctttcactgaacaggcagttcatggacgagcgctggtccaaacatcgggtc
gtcacctgtctggactggtctccgctgtatcctgagctcctggtcgcctcctacaacaac
aacgaggaggctccacacgaaccagacggcgtggctttagtctggaacatgaagtacaag
aaagccacgccagaatacgtcttccactgtcagtcggccgtgatgtctgcggcatttgca
aagtttcacccaaacgtcgtggttggtgggacgtactctgggcagatcgttctgtgggac
aacaggagcaataagaggaccccagtgcagaggaccccgctctcagcagcagcacacacg
cacccggtgtattgtgtgaacgtagtcggcacgcagaacgcccacaacctgattagcatc
tcaacggacggcaagatctgctcctggagtctggatatgctctcccagccgcaggacagc
atggagctcgtcttcaagcagtccaaagccgtcgccgtcacctccatgtccttccctttc
ggagacgtcaacaactttgtggtgggcagcgaggacggctccgtctacatgtcgtgtcgt
catggaagcaaagcggggatcagcgagatgtttgagggccaccacggccccatcaccggg
atccactgccacacagctgcagggccgctggacttctcccacctgtttgtcacctcatcc
ttcgactggaccgtcaaactgtggagcaccaagaataacaagccgctctactcatttgaa
gacaattccgactacgtgtatgacgtcatgtggtctcccactcacccggctctgtttgca
tgcgtggacggcatcggccacctggacctgtggaacctgaacaacgacactgaggtcccc
actgctagcgttgtggtggaggggagcccggccctcaacagggtcagatgggctcatacc
gggagagagatcgcagtgggagactccgatggacgcgttcttgtttatgaggttaaagag
caaattgcagttccgcgaaacgacgagtggacgcgcttcgtctgcacgctggcagagatc
aacgagaatagagacgacgcggaggagctggccgctcagcgtctggctgcgtga
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