Xiphophorus couchianus (Monterrey platyfish): 114148094
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Entry
114148094 CDS
T05908
Symbol
nup62
Name
(RefSeq) nuclear pore glycoprotein p62
KO
K14306
nuclear pore complex protein Nup62
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114148094 (nup62)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114148094 (nup62)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114148094 (nup62)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Motif
Other DBs
NCBI-GeneID:
114148094
NCBI-ProteinID:
XP_027878843
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Position
7:complement(15801395..15804517)
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AA seq
547 aa
AA seq
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MSGGFNFGQPSGFFPAQKTTAGAPAAGFSLTNSAPAATGGGFSFGAPTGQTNPNPTGSFS
FGNPAKSSAPGTSFSFGTPTTTFGLGTAPQTTAAAPGLTLGSMLAPSTGTGFTLGGGLSS
QTTAAAPAGGGFTFGGAAQAPAASAAAPAATTAAAGGVPFGGFSFGGSKVLVTTASASPA
PAAPAPTGAGGGGGFSFGTTAPSTSAAATIQSGGGGFSFGVKPSSTPAPPAYTQAASAAP
SGPSLFASPLTTATAAPAATTGFLLGTAPASIASTATPSATGGGLNFTLKPLGSAATTAA
ASTTITAPAATTGTAVGFSLGVKPLSSTAMTAATTAATLTTTTAATTTNPPVMSYAQLES
LINKWSLELEDQERHFLQQATQVNAWDRMLVENGEKITSLHKELEKVKLDQRRLNQELDF
ILSQQKELEDLLCPLEESVKEQSGTIYMQNADEERERTYKLAENVDAQLKRMSQDLKEII
EHLNTSSGPADTSDPLQQICKILNAHMDSLQWIDQNSVLLQRRVEEVSKLCDTQRKEQEK
TFRLTFD
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggattcaacttcggtcagccttcaggcttcttcccagcccagaagaccacc
gctggtgctcccgccgcaggtttctctttaacaaactccgctcctgcagccaccggaggc
ggcttcagcttcggggctcccaccggtcagaccaaccccaaccccaccggctccttcagc
ttcggcaacccagcgaagagctccgcacccggtacgagtttctcttttgggacccccacc
accacgtttggcctgggcacggcccctcaaaccacagcggcggcccccgggctcactcta
ggctccatgttggctccctccacggggactgggttcactctgggcggggggttgtcctct
cagaccaccgctgcagctcctgcaggtggaggcttcaccttcggaggtgccgctcaggct
ccagctgcatcagcagctgcacctgcagctacaacagcagcagcaggcggtgttccgttt
ggaggcttcagcttcggggggtccaaagtcctggtgaccacagcttcagcatctcctgct
ccagctgcaccagcaccaacaggagcaggaggtggaggagggttcagcttcggcaccact
gccccctccacctccgcagctgcgacaatccagagcggaggtggaggattcagctttggg
gtgaaaccatcgtcaaccccggctccgcctgcctacacccaggctgcctctgcggctcct
tcaggtccatctctgtttgcttcacccctcaccacggcgacagcagcccctgcagcaacc
acagggttcttgctggggacagctccggcatcaatagcgagcaccgcaacaccgtcagct
acaggcgggggactgaacttcaccctcaagcccctggggtcagccgctaccacggctgct
gcctccaccaccatcacagctccagccgccacgactggcaccgcggtcggtttcagcctg
ggagtcaaacctctgtccagcacagccatgacagccgccacaacagccgcaaccctcacc
actaccaccgccgccaccacaacgaatcctccggtgatgagctacgcccagctggagagc
ctcataaacaagtggagcctggagctagaggaccaggagagacacttcctgcagcaggcg
acgcaggtgaacgcctgggaccgcatgctggtggagaacggagagaagatcacgtccctg
cacaaggagctggagaaggtgaagctggaccagcggcggctcaaccaggagctggacttc
atcctgtcgcagcagaaggagctggaggacctgctctgcccgctggaggagtcggtgaag
gagcagagcggcaccatctacatgcagaacgccgacgaggagcgagagaggacgtacaag
ctggctgagaacgtggacgcgcagctgaagaggatgtcgcaggacctgaaggagatcatt
gaacacctgaacacatccagcggaccggcagacaccagcgatccgcttcagcagatttgt
aaaatcctcaatgcccacatggattctctgcagtggatcgaccagaactctgttctgcta
cagcggagggtggaggaagtgtccaaactgtgtgatacgcagcgcaaggagcaggagaaa
acctttcgcttaacctttgactga
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