Xiphophorus couchianus (Monterrey platyfish): 114148180
Help
Entry
114148180 CDS
T05908
Symbol
cacna1d
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04020
Calcium signaling pathway
xco04218
Cellular senescence
xco04260
Cardiac muscle contraction
xco04261
Adrenergic signaling in cardiomyocytes
xco04270
Vascular smooth muscle contraction
xco04530
Tight junction
xco04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114148180 (cacna1d)
04020 Calcium signaling pathway
114148180 (cacna1d)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
114148180 (cacna1d)
09144 Cellular community - eukaryotes
04530 Tight junction
114148180 (cacna1d)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
114148180 (cacna1d)
09153 Circulatory system
04260 Cardiac muscle contraction
114148180 (cacna1d)
04261 Adrenergic signaling in cardiomyocytes
114148180 (cacna1d)
04270 Vascular smooth muscle contraction
114148180 (cacna1d)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114148180 (cacna1d)
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114148180 (cacna1d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
114148180
NCBI-ProteinID:
XP_027879045
LinkDB
All DBs
Position
1:complement(9694387..9768439)
Genome browser
AA seq
2270 aa
AA seq
DB search
MPFIIRGKPLRGAQYASNRKTTPSSDTPAIWSDSRTSLHQLPSPEPIQAPASTGKPIGSS
CGLLGASSSSQGGSGSGVSPVLAWHAAITAARQAQDDVETPEKDSRPSACASGPAPVGSL
AQRKRQQYAKSKKQGGSTNSRPPRALFCLTLNNPIRRACISLVEWKPFDIFILLSIFANC
VALAIYIPFPGDDSNSTNQELETVEYAFLIIFTIETFLKIIAYGLVMHQNSYVRNGWNML
DFVIVIVGLFSVVLEMITKDADSGGQTGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQVV
LNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCFIIKSGALAEEEPTPCAVS
GHGRRCLVNGTICREGWQGPNNGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDAMGFE
LPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLD
WITQAEDIDPENEEEGDEEGKRNRVTLADLTEKKKGKFGWFSQSTETQASMPTSETESAT
TDNHNGEEDKSLCCGPLCRQWRRWNRFCRRKCRAAVKSVTFYWLVIILVFLNTLTIASEH
YNQPEWLTEVQDVANKVLLALFTLEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGIVETIL
VELAIMSPLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIF
SLLGMQLFGGKFNFDETVTKRSTFDNFPQALLTVFQILTGEDWNTVMYDGIMAYGGPASS
GMVVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEEEAKKRKNSVKDSNTE
KKRIEITEDGKTMMPTEALLEGDKESFTTVDSPGDDEDNDDNRNLPEAPPGPRPQRLSEL
TMKEKTPPIPEGSAFFIFSSTNPFRVLCHKLINHQIFTNLILVFIMLSSVSLAAEDPIRN
FSARNIILGYFDYAFTAIFTVEILLKILGYADYVFTSMFTFEILIKMTAFGAFLHKGAFC
RNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVA
IRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDDAKSSPDECKGTYILYNNGDTALPM
VKERIWYNSDFNFDNVLMAMMALFTVSTFEGWPTLLYKAIDSNRENMGPIYNYRIEISIF
FIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPK
NPYQYKFWYVVNSTGFEYVMFVLIILNTLCLAIQHHGQSHLFNYAMDILNMVFTGVFTVE
MILKLVAFKPRGYVGDAWNVFDALVVIGSVVDIILSQNYFADAWNTFDALIVVGSVVDIA
ITEINSAAIPVVKVIEDPGNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKS
FQALPYVALLIAMLFFIYAVIGMQVFGKIAMVDGTQINRNNNFQTFPQAVLMLFRCATGE
AWQEIMLACLPGKLCDSESDYNPGEEKTCGSNFAIIYFISFYMLCAFLIINLFVAVIMDN
FDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRV
ACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSM
KLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKRRKEQGLVGRRSWENTTLALQAGLRT
LHDIGPEIRRAISCDLQEEGLVDGTAEEEEEIYRRNGGLFGNHVNHVGMDHPQPTTVTQR
PLQILPIYCTPSAAPTQICRRASSSDKEGETEMNSSPIHYNHHHSPHLYDYPHCNSTSPQ
SPIPSNANLNNANVPSLLSMSSGRQQKCLLQRCRPSSARNKTSTSYSRGLHNKQWKSHST
RTRYYEAYIRSKNGGALHPTIRREEPGGRDSDEERASGEYFSGEEFHEDDIMLTKDRLSK
SDFHDAADGDLDHFRDDCGSEGYCDDDKQPICQEDRRSPRRWFLPSPQACNTPTFSFECL
RRRSSIDEAPPSPSCTALPLHLVQQQVMAVAGLDAARIARLSPTRSLRSWATPPASPISR
DCGPCYTPLIQVDWRSTGSVGSIPGAVKRSSWYTDCQDGLPSRSHSPSRLQLPAESCSHF
LQNRGSASSLVEAVLISEGLGKYARDPKFVTAAKHEIADACEMTIDEMESAASNLLNGSM
GNGDVAGMESVSSDSRLADAHQRDYSDEEQYVAVKCEEDLTDEMICITSL
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcattataagggggaaacccctgaggggggcacaatatgccagcaacagaaag
accactccttccagtgacactcccgcgatctggtctgacagccgtaccagcctccaccag
ctcccttctccagagcccattcaggctccggccagcactggcaagcctatcggctcctct
tgtggtctccttggggcgagtagtagtagtcagggtggctctggttctggtgtcagccca
gtgcttgcgtggcatgccgccattactgctgctcgacaagcgcaagatgacgtcgaaacg
cctgaaaaggactcacgtccctcggcttgcgcttctggtccggctcctgttggctcactc
gcacagaggaagagacagcagtatgccaaaagcaaaaagcaaggaggatccaccaacagc
cggccacccagagcgttgttctgcctcaccctcaataacccgatccgaagggcctgcatc
agcctggtggaatggaaaccatttgatatatttatactcctgtctatttttgccaactgc
gtggccttagccatctacattccctttcctggagatgactccaactctacaaaccaagaa
ctggaaacagtagaatatgccttcctgatcatttttacaatagaaacatttctgaagatt
attgcctatggcttagtcatgcaccaaaactcctacgtcagaaacggatggaacatgttg
gactttgtcatcgtcattgtggggttgttcagtgttgtcctggaaatgataaccaaagac
gctgactctggtgggcagactggaggcaaaccagggggctttgacgtgaaggccctcaga
gcctttcgcgtgcttcgacctcttcgccttgtttctggagttcccagtttacaggtggtt
ttaaactccataattaaagccatggttcccctccttcacattgctctgctggtcctcttt
gtaatcatcatctacgccatcatcggcctggagctcttcattggaaagatgcacgccacc
tgcttcatcataaaatcaggagccctggcagaggaggagcccacgccgtgcgctgtctca
gggcacggccgccgctgcctcgtcaatggcaccatttgcagagagggctggcaaggcccc
aacaacggcatcaccaactttgacaactttctgttcgccatgctcaccgttttccagtgt
atcaccatggaaggctggaccgacgttctctactggatgaatgatgcgatgggctttgag
ctgccgtgggtctactttgtcagtctggtcatctttggatcgttctttgttctgaacctg
gtcttgggagtgttgagtggagagttttccaaagagcgtgaaaaggccaaagctcgcggc
gacttccagaagctgcgcgagaagcagcagctggaggaggaccttaagggctacctggac
tggatcacgcaagccgaggacatcgaccccgagaacgaggaggagggggacgaggagggc
aagcgcaatcgggtcacactggctgacctcactgagaagaagaaaggaaagtttggctgg
ttctctcagtccacagagacacaggccagcatgcccacgagtgagacagagtcggcgacc
acagacaaccataatggagaagaggacaaatctctgtgctgtggaccgctatgtcggcag
tggcgacggtggaaccgcttctgccgcaggaagtgccgggcggccgtgaaatccgtgacg
ttttattggctcgtcatcatcctggtgttcctcaacaccctcaccatcgcgtcagagcac
tacaaccagcccgaatggctaacagaagtgcaagatgtagccaataaggttcttttggct
ttgttcactctggagatgctcgtgaagatgtacagtttggggctccaggcctactttgtg
tcgctgttcaaccgctttgactgttttgtggtgtgtggaggaatcgtggagaccatcctg
gtggagctggccatcatgtctccgctggggatctcggttttgcgctgcgtgcgcctcctc
aggatcttcaaagttacgcgtcactgggcgtctcttagtaacctggtggcctccctgctc
aactccatgaagtccatcgcctccctgctgctgctgctcttcctcttcatcattattttc
tccctgctgggcatgcaactcttcggaggcaaattcaactttgatgagacggtgaccaaa
agaagcacatttgataatttcccccaggccctcctcaccgtgtttcagatcctgacaggc
gaggactggaacaccgtgatgtatgacggcatcatggcgtacggtggaccggcgtcctct
ggcatggtggtctgcatttacttcatcatcctcttcatctgtggaaactacatcctgctg
aatgtgttcttggccatcgctgttgataacctggctgatgcagagagcctcaacacagca
cagaaagaggaggaggaggccaaaaagagaaagaatagtgttaaggactcaaacacagag
aagaagaggattgaaataacagaagacgggaaaacaatgatgccaacggaggccttgcta
gagggggacaaagaatcgtttacgaccgtcgactcaccaggtgatgatgaagataatgat
gataataggaacctccctgaagccccgccgggcccccggccccagcgactctctgaactc
accatgaaggagaagaccccacccatcccggagggcagtgcgtttttcatcttcagcagc
accaacccgtttcgtgtgctctgccataagctcatcaaccatcagatcttcaccaacctg
atcctggtcttcatcatgctcagctccgtttccctggcggccgaggaccccatccgcaac
ttctccgctcgcaacattatacttggttattttgactatgctttcaccgcaatctttact
gttgagatcctgttgaagatcctaggctatgcagactatgtcttcactagtatgtttaca
tttgagatccttattaagatgacggcatttggagcgttcctgcataaaggggcgttctgc
aggaactacttcaacctattagacctgctggtcgtcggcgtgtctctcgtctcctttggt
attcagtcctctgctatctcagtggtgaagatcctccgtgttttgcgggtcctccgtccg
ctcagggccatcaacagagccaaaggcctgaaacacgtggtgcagtgtgtatttgtggcc
atcagaaccatcggcaacatcatgattgtcaccaccctcctgcagttcatgtttgcttgc
atcggagtgcagctcttcaagggtaaattctaccggtgcacagatgatgcaaagtccagc
ccagatgagtgcaaggggacatacattctttacaacaatggggacacggctctgcccatg
gtgaaggagaggatctggtacaacagtgacttcaactttgacaacgtcctcatggccatg
atggccctgttcaccgtctccacctttgagggttggcccactctgctgtacaaggccatc
gactcgaacagggagaacatgggccccatctacaactaccgcatcgagatctccatcttc
ttcatcatctacatcatcatcatcgccttcttcatgatgaacatcttcgttggtttcgtc
atcgttaccttccaggagcagggagagaaggagtacaagaactgcgagctggacaagaac
cagcgccagtgtgtggaatacgcactgaaagctcgtcctctgcgccgctatattcccaaa
aatccctaccagtacaagttctggtacgtggtcaactccactggctttgagtacgtcatg
tttgtcctgatcattctcaacacgctgtgtctggctattcagcaccatggccagtctcat
ctgtttaactacgccatggacatcctcaacatggtcttcacaggagtcttcacagtggag
atgatcctgaagctcgttgccttcaaacccagaggttatgtcggggacgcctggaatgtc
ttcgatgctctagtggtgatcggcagtgtagtcgacatcatactcagccagaactatttt
gctgatgcatggaacacgtttgatgccttaattgttgtgggtagcgtggttgacattgcc
atcactgagatcaattcggcagccattcctgttgtcaaggtgatagaggatccagggaac
acagaggacagcgctcgcatctccatcaccttcttccgcctgttcagggtgatgcgactg
gtcaaactcctgagcagaggggaaggaatcaggactctgctgtggaccttcatcaagtct
ttccaggctcttccatatgttgccctcctgatagccatgctgttcttcatctatgctgtc
atcgggatgcaggtgtttggaaaaatagcaatggtggacggaacccaaatcaaccgcaac
aacaacttccaaacctttccccaagccgtcctgatgctgttcagatgtgctacgggggag
gcgtggcaggagatcatgctggcctgtctgccggggaagctgtgcgactcggagtccgac
tacaacccgggagaggagaaaacctgtggcagcaactttgctataatttacttcatcagt
ttctacatgctctgcgccttcctgattatcaacctctttgttgcggtcattatggataac
tttgattatctgactcgtgattggtccattcttggccctcaccatctggatgaatttaaa
aggatatggtctgaatatgatcctgaagcaaagggtaggattaaacatcttgatgtggtt
accctgttgaggaggatccagcctccgttgggctttggcaaactctgtcctcacagagtc
gcctgtaagcgactggtggcaatgaacatgccgctcaacagtgacgggaccgtcatgttt
aacgccaccttgtttgctttagtccgcaccgcccttaagatcaagactgagggtaacttg
gagcaagccaacgaggagctgagagctgtaatcaagaagatctggaagaggaccagcatg
aagctgctggatcaagtagtgcctcctgcaggcgatgacgaggtaactgtggggaagttc
tatgccaccttcctgatacaggactacttcagaaaattcaagaggcgcaaagagcaaggt
ctggtgggaaggaggtcttgggagaacaccactctggccttgcaggccggcttgcgcacc
cttcacgacattggaccagaaattcgccgagccatatcatgtgacctacaggaggagggg
cttgtagatggaacggcagaggaagaagaggagatttatcggcgcaacggcggccttttt
gggaatcacgttaaccacgttggcatggatcatccccaacccactaccgtcacgcagcgc
cccctacagatcctgcccatctactgcactccctctgccgcgcccactcagatttgcagg
agagccagcagcagcgacaaggaaggagagacggagatgaactcctcacccatccactac
aaccatcatcattcccctcatctgtacgattaccctcactgtaactccacctcccctcag
tccccaataccctccaacgccaacctcaacaacgccaacgtgccctcgcttctctcgatg
tcctctgggaggcagcagaagtgtttattgcagagatgtcgcccgtcttcagcaagaaat
aagacatcaacgtcttacagcagggggttgcacaacaagcagtggaagtcccactccaca
aggacgcgctactatgaggcctatattaggtcaaaaaatggcggagcgcttcacccgacc
attcgccgagaggagccaggtggcagggacagcgatgaagagcgggcgtctggggaatac
ttcagtggggaggaatttcacgaagacgacatcatgcttaccaaggacaggttatccaag
tcggacttccatgacgctgcagacggagatttggaccatttcagggacgactgtgggtct
gaaggttactgtgacgacgacaagcagcctatatgccaggaagaccggcggtcgcccagg
agatggtttttaccatccccccaagcctgcaacacaccaacattcagctttgagtgtctt
cgcagaagaagtagcatagatgaagctcctccatctccatcatgcacagctcttccactg
cacctggtgcagcagcaggtgatggcggtagccggtctggacgccgccaggatcgcacgt
ctgtctcccaccaggtcgctacgctcgtgggccacacctcccgcctcccccatcagccgt
gactgcggcccctgctacaccccactcatacaggtggactggcgcagtactggcagtgtg
ggcagcatccctggggccgtgaagaggagttcttggtacaccgactgccaggacggcctg
cccagccgtagccactcaccgtcacggctgcagctacccgcagaaagctgctcacacttc
ctgcaaaacagaggcagcgctagcagtctggtggaggctgtcctgatctctgaaggtctc
gggaaatacgccagggaccccaagtttgtgacagcggccaaacacgagatcgcagacgcc
tgcgagatgaccatcgacgagatggagagcgctgccagcaatctgctgaacggcagcatg
ggtaacggcgacgtggcggggatggaaagcgtcagctcagactcgcgactcgccgacgcg
caccagagggactacagcgacgaggagcagtacgtggctgtgaagtgtgaggaggaccta
acggacgagatgatatgcatcacttctctatag
DBGET
integrated database retrieval system
