Xiphophorus couchianus (Monterrey platyfish): 114148285
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Entry
114148285 CDS
T05908
Name
(RefSeq) contactin-3-like
KO
K06761
contactin 3/4/5/6
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114148285
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xco00537
]
114148285
Cell adhesion molecules [BR:
xco04515
]
Immunoglobulin superfamily
Contactins
114148285
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xco00537
]
Others
114148285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_C17orf99
Pur_ac_phosph_N
C2-set_2
C2-set_3
Pox_C7_F8A
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
114148285
NCBI-ProteinID:
XP_027879253
LinkDB
All DBs
Position
7:complement(23003188..23096011)
Genome browser
AA seq
1026 aa
AA seq
DB search
MMLPWKQIVLLSITGCLAACTEDVIFQGPRWRTEPGDLILPINTPDHQATIACEAEGSPR
PRYRWSLNGTLIDLGSDYRRHMSGGSLIIRNLDKDQDSGMYQCTAFNTLGSILSRRASIQ
FAYLDSFKTQSVRSAVNVREGQGVVLLCGAPPHSGELTFAWIFNEYPYSVQQDSRRFISQ
ETGSLYIAKVEPSDVGNYTCVVNNTVTKQKVLSSPTPLVLRSDGVMGEYEPKIEVHFPDS
VPAAKESVVKLECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAVLEIPNFQQEDAGMYE
CIAENRRGKNAARGRISYHAKPQWLQTITDTARSIEENLFWECKANGKPKPSYSWLKNGE
QVVAEARVQIENGALSITALNLSDSGMYQCVAENKHGSIYSSAQLMVLASAPSFSRSPLK
ALLKARSGSEVTLECKPQASPPAISLWKKGNEILQRTERITLLPNGTLKIANVTKRDAAS
YTCIAKNQFGTASATGKLLITEPTRITMRPTNMEIIVGESIVLPCQIASDPALDVSFSWA
FNGQLIDFQRDGDHFERVGGTVSGDLMIRNIQLSHGGKYVCVVDTDVESLSTSAILVVKG
PPGPPDKVSVEEITDSTAQLSWTPGRDNGSPITGYIVQARTPFTVGWQAIDTVPEVVNGN
MLTATVVGLNAWVEYEFRVVARNVVGLGEPSPASAKTRTEDAIPDTAPPDVGGGGGTKSE
LVITWEPLPEELQNGDGFGYVVAFRSAGAVTWTRAVVSAPAVSRYVLRNDTIPPFSLFDI
KVAAYNNRGEGPFSSIATVYSAEDVPSVAPKRVRARSLSAAEIEVIWETLPSLPERILGY
EVMYWEDDTKPDTVGKVRITGNYTQVNITGLKANTVYYLSVAAFNTAGPGPQSPPINNTT
RKPPPDRAPLNIQWSMIGSSLTLHWDPVVATEIESKVTGYLVILKRHRYNDIHTTFTNRT
SAELSLSAGDNYLIQIKVLSEGGEGVGSEPIHIHKLSMGARGSGASGLRRLSCSFVLIGA
FLCSVW
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgatgttaccatggaaacaaattgttctgctatcaatcaccggatgccttgcagcctgt
acagaggatgtcatatttcaagggccaagatggaggacggagcctggtgacctcattttg
ccgatcaacaccccggaccaccaggcgactattgcctgtgaggcggaagggagcccccgg
cctcggtacagatggtcactaaacggaacgctcattgatctggggagcgactaccggcgt
cacatgtctggaggcagcctgatcattaggaacctggacaaagatcaagacagcgggatg
taccagtgcacggctttcaacacgctgggctccatcctgagccgcagagccagcatccag
ttcgcatatctcgacagcttcaaaacgcagtcggtgaggagtgcagtgaacgtccgtgag
ggccaaggagtggttcttttatgtggagctcccccacattctggagagctgacatttgcg
tggatcttcaatgaatacccgtactccgtccaacaagacagccgaagattcatctcccaa
gagaccggaagcctgtatatagccaaagtggagccctctgatgtgggcaactacacttgt
gtggtgaacaacacagtcacaaagcagaaagttctcagctccccaacaccactagtcctc
aggagtgacggtgtaatgggtgagtatgagcccaaaatagaagttcattttccagattcg
gttccagctgcaaaagaatctgtggtcaaactggaatgttttgctctgggaaaccctgtc
ccagaaataagctggaggagaacaagcggtgtccctttccccagcaaagtcaaaatgaag
aattcgaatgccgtccttgaaatccctaattttcagcaggaagatgcagggatgtatgag
tgtatcgcagagaaccggagaggcaaaaacgctgctcgaggtcggatttcttaccatgct
aaacctcagtggctccagacaataacagacacggctcggtccatcgaggagaacctcttc
tgggagtgtaaggccaatggaaagccaaaaccgtcctacagctggctgaagaatggcgag
caagtggtggctgaggcccgggtacaaattgaaaacggagccctctccataaccgcgtta
aacctatcagattccgggatgtatcagtgtgtggccgaaaacaaacatggcagtatttat
tccagtgcccagctaatggtgttagcttcagctcccagtttctccagaagtccattaaag
gccttgctaaaagctcgctcaggcagcgaagtcactctggaatgcaagcctcaggcctcg
cccccagcaattagcttgtggaagaagggaaacgagattctgcagagaaccgaaaggatc
actctgctgccaaatggaactttaaaaattgctaatgtaaccaaacgggatgcagctagc
tacacgtgcatcgccaaaaaccagtttggaacagcaagcgcaactgggaagctcctcatc
accgagcccaccagaatcaccatgaggcccactaacatggagattattgttggcgagagc
atcgtgctgccctgccagatcgcttctgatccagctctggacgtctccttctcgtgggcg
ttcaacggccagctcatcgacttccagagagacggtgaccacttcgaaagagtgggtggg
actgtatcaggggatctgatgatccgcaacatccagctgagccacggagggaagtacgtg
tgcgtcgttgacacggacgtggagagcctgtccacctctgccatcctggttgtcaaaggt
cctccaggccctccggacaaagtctcagtggaggaaatcacagacagcacagcccagctg
tcctggacgcctggaagagacaacggcagccccataacgggctacatcgttcaggctcgc
acaccgttcactgtgggctggcaggccatagacacagtcccggaggttgtcaatggcaac
atgctaactgccactgtggtcggtctgaatgcctgggtggagtacgagttcagggtggtg
gcccggaatgttgtgggcctcggagagccgagtccagcttcggccaagaccagaacagaa
gatgctattcctgatacagctccccctgatgttggaggtggcggcggcacaaagtctgaa
ttagtgataacatgggagcctctgcctgaagaactgcagaatggcgacggctttggctac
gttgtggccttcaggtcagctggtgcggtcacgtggacgcgggcggtggtctctgcgccc
gccgtgtctcgctatgtgcttcgcaacgacaccatcccgcccttctcgctgttcgacatc
aaggtggcggcctacaacaaccgaggggaagggccgttcagctccatagccacggtgtac
tcggcagaagacgtccccagtgtggctcctaagagggtgagggcccggagtttgtcagcg
gcagagattgaagtgatctgggaaactctcccttccctcccagaaagaattcttggatat
gaggtgatgtactgggaagacgacaccaagcctgacactgttggcaaagtgcggataaca
gggaactacacacaggttaacatcacggggctgaaagccaacacggtgtactacctctct
gtggctgccttcaacacggccgggcccgggccgcagtcgccgcccattaacaacaccacc
aggaaaccaccaccagacagggctccactcaacatacaatggagcatgattggctcctca
ctaacgctgcactgggaccccgtagttgccacggagatcgagtcaaaggtgaccggatat
ttggtgatactgaagagacaccgatacaacgacatccacaccaccttcaccaacagaacc
tcggctgagctcagcctctcggccggcgacaactatctcatccagatcaaggttctgagc
gaaggcggcgaaggcgtgggcagtgaacccatacacatccacaaattaagcatgggagct
cggggttctggagccagcggtctcagacggttgtcttgctccttcgtccttattggtgca
ttcttatgctccgtctggtga
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